Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0465 ATGGATGATTTCTTTCGAACAGTGTTGGCGAGTGTGCCTTTGGGAGTCGGGGCAATATTGTTCACGACGTTGTGCGTCGTGGGAGGGGGTTTGGTTTATTTCTATGGACCGTACTGGGGAGTGAGAAGGGTGCCTGGTCCACCAGCTATTCCGCTGGTCGGACACCTTCCCTTGCTGGCTAAGTACGGCCCAGACGTTTTCTCTGTCCTCGCCTCCCAATATGGCCCTATCTTCAGGTTCCATATGGGTAGGCAGCCATTGATAATTATTGCAGACCCTGAGCTTTGTAAGGAAGTTGGTATCAAGAAATTTAAGGACATCCCAAATAGAAGTGTCCCTTCTCCAATATCAGCTTCCCCGCTTCATCAGAAAGGTCTTTTCTTCACAAGAGATGCAAGATGGTCGACTATGCGAAACACAATATTATCGGTCTATCAGCCCTCTCATCTAACGAGACTAATACCTACTATGCAATCAATCATTGAAACTGCAACTCAAAATCTCCATTCCTCTGTCGAGGGAGACATCCCTTTCTCCAATCTCTCCCTCAAATTGACCACCGATGTGATTGGAACTGCAGCCTTCGGTGTCAACTTTGGGCTCTCTAATCCACAAGCAACCAAAACTTGTGTTACCAATGGCCAAGACAACAAAAATGATGAAGTTTCGGACTTCATCAATCAACATATCTACTCCACAACGCAGCTCAAGATGGATTTATCAGGTTCCTTCTCGATCATTTTGGGACTACTTGTCCCTATACTCCAAGAACCATTTAGACAAGTCCTGAAGAGAATACCATTCACCATGGATTGGAAAGTTGACCGGACAAATCAGAAGTTGAGTGGTCGGCTCAACGAGATTGTAGACAAGAGAATGAAGTGTAACGATCGAGGTTCAAAAGACTTCTTATCACTTATTCTGAGAGCAAGAGAGTCAGAGACGGTAGCAAGGGATGTCTTCACTTCAGACTACATCAGTGCAGTCACGTACGAACATCTACTTGCTGGGTCAGCTACCACGGCTTTCACATTGTCTTCTGTCGTATATTTAGTTGCTGGACATCCAGAGGTTGAGAAGAAGTTGCTAGAAGAGATTGACAAATTTGGTCCATCAGATCAGATGCCAACAGCCAATGATCTTCAGCAGAAGTTTCCATATCTTGATCAGGTGATTAAAGAGGCTATGAGGTTCTACACTGTTTCACCGCTAGTAGCTAGAGAGACATCTAAAGATGTGGAGATTGGTGGATATCTTCTTCCAAAGGGAACATGGGTTTGGTTAGCACTTGGAGTTCTTGCCAAGGATCCAAAGAACTTTCCTGAACCAGATAAATTTAAACCAGAGAGGTTTGATCCAAACGAGGAAGAGGAGAAACGAAGGCATCCCTATGCTTTAATCCCATTTGGAATCGGTCCTCGAGCATGCATTGGTCAAAAATTCGCCCTTCAGGAGATGAAGCTCTCTCTGATTCATTTGTATAGGAAGTTTGTATTTCGACATTCCCTTTCCATGGAACAACCTCTTGAACTTGAGTATGGTGTCATTCTCAGCTTCAAGAATGGTGTCAAGCTCAGAGTAATAAACCGCAAATAA 1596 44.3 MDDFFRTVLASVPLGVGAILFTTLCVVGGGLVYFYGPYWGVRRVPGPPAIPLVGHLPLLAKYGPDVFSVLASQYGPIFRFHMGRQPLIIIADPELCKEVGIKKFKDIPNRSVPSPISASPLHQKGLFFTRDARWSTMRNTILSVYQPSHLTRLIPTMQSIIETATQNLHSSVEGDIPFSNLSLKLTTDVIGTAAFGVNFGLSNPQATKTCVTNGQDNKNDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQVLKRIPFTMDWKVDRTNQKLSGRLNEIVDKRMKCNDRGSKDFLSLILRARESETVARDVFTSDYISAVTYEHLLAGSATTAFTLSSVVYLVAGHPEVEKKLLEEIDKFGPSDQMPTANDLQQKFPYLDQVIKEAMRFYTVSPLVARETSKDVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPDKFKPERFDPNEEEEKRRHPYALIPFGIGPRACIGQKFALQEMKLSLIHLYRKFVFRHSLSMEQPLELEYGVILSFKNGVKLRVINRK 531
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 3402231 3404604 + Lag0037103.1 Lac2g0465 597729
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0465 531 FunFam Cytochrome P450 3A4 32 531 - -
Lac2g0465 531 Pfam Cytochrome P450 45 509 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac2g0465 531 Gene3D Cytochrome P450 35 531 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0465 531 PANTHER THROMBOXANE-A SYNTHASE 23 530 - -
Lac2g0465 531 SUPERFAMILY Cytochrome P450 37 530 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0465 Lac-Chr2:3402231 Lac2g0365 Lac-Chr2:2742169 4.40E-31 dispersed
Lac2g0465 Lac-Chr2:3402231 Lac6g2958 Lac-Chr6:47176422 8.60E-27 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0465 K20771 - csv:101209772 1011.91