Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0466 ATGGGGGGCTCTGGGAAATGGATGAAGGTTCTTTTAGGACACAGGAAGTCTGATAAGGAAGACAATGAGAAGTTGGGGAGTAAAACTAAGAAATGGAGGCTATGGAGGAGCCCTTCAGGGGATTTGAGCTCTGCTTGGAAGGCTTATAAAGGGGCACATAGAGCAGCTTCTGAAGGCTCTGATTCTCCTCGAGCCGCTGATTCTTTTACCGCCGCTGTCGCCACCGTCCTCCGTGCTCAGCCGAAAGATTTCAGGGTTGTCCGCCAAGAATGGGCTGCAATTCGAATCCAAACTGCATTTCGTGGTTTCTTGTCTAGGAGGGCTCTTAAGGCCTTGAAGGGAGTGGTGAGGCTTCAGGCTCTGGTTAGAGGTCGTTTGGTGAGAAAGCAGGCAGCTGTTACACTGAGGTGCATGCAGGCTCTGGTTCGAGTTCAAGCTCGAGTCAGGGCGCGTCGTGTGAGGATGTCGGTCGAAGGGCAGGCCGTGCAGCAATTGCTTAATGAACATCGCAGCAAGGCTGATCTCTTGAAGCAAGCTGAGGAAGGTTGGTGTGATAGCAAAGGAACATTGGAAGATATCAAAGCTAAGTTACAAATGAGGCAAGATGGAGCATTTAAGAGGGAGAGAGCAATTGCATACTCTCTTGTTCAAAAGCAATTGAAGGCAATACCAAGCTCATCTTCACGAACAAACGCTTCAATTTACGCTCTTAAGAATTATGAGTTTGACAAGAACAACTGGGGATGGAGTTGGTTGGAGAGATGGATGGCAGCAAAGCCATGGGAGACGAGGTTGATGGAACAATCTCGCACCGATTCCTTTGAGGTCACTCCACCTTCAAAGAGCTGTACAGAGTCTGTTGTGTCTAAACATTCCAAATGTTCTGAACCAAGTTTGGTGAAAGTTAGGAAGAACAATGTATCAACTAGAATTTCTGCTAAACCTCCCTCAAGTGGGCAAGCTCGCTCTTGTTCTAGCCCAAGTTCTGATTTCTGGTATGATGAGAGCTCTGCTTCATCTTCAATCTGCACGTCAACAACTCCCGTGTCGGGGCATGCTTTCTCAACCATAGAAAGAACAGAGAATTGCAATTACAGTAGGCCTAGTTATATGAACCTTACAGAGTCGACAAAGGCAAAGCAGAAAACAAATAGTCACTTATCGCATAGAGTTCAAAGGCAGTCCATGGATGAGTATCAATTCCTTCAGAAATCAGCAGCTTTCTCAAATGCAGATTCTAAGAGTAGTGCTGGCTCTGATTCATCAGTCAACCCCTTTAAGCCATTAATGCTGCCAACACGATCGGATAAGAATGGAACAAAGCTAAGGTCATGA 1335 46.52 MGGSGKWMKVLLGHRKSDKEDNEKLGSKTKKWRLWRSPSGDLSSAWKAYKGAHRAASEGSDSPRAADSFTAAVATVLRAQPKDFRVVRQEWAAIRIQTAFRGFLSRRALKALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSVEGQAVQQLLNEHRSKADLLKQAEEGWCDSKGTLEDIKAKLQMRQDGAFKRERAIAYSLVQKQLKAIPSSSSRTNASIYALKNYEFDKNNWGWSWLERWMAAKPWETRLMEQSRTDSFEVTPPSKSCTESVVSKHSKCSEPSLVKVRKNNVSTRISAKPPSSGQARSCSSPSSDFWYDESSASSSICTSTTPVSGHAFSTIERTENCNYSRPSYMNLTESTKAKQKTNSHLSHRVQRQSMDEYQFLQKSAAFSNADSKSSAGSDSSVNPFKPLMLPTRSDKNGTKLRS 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3405215 3407175 - Lag0037104.1 Lac2g0466 597730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0466 444 MobiDBLite consensus disorder prediction 410 428 - -
Lac2g0466 444 MobiDBLite consensus disorder prediction 410 444 - -
Lac2g0466 444 PANTHER IQ-DOMAIN 5-RELATED 6 397 - -
Lac2g0466 444 ProSiteProfiles IQ motif profile. 113 140 - -
Lac2g0466 444 ProSiteProfiles IQ motif profile. 89 117 - -
Lac2g0466 444 MobiDBLite consensus disorder prediction 376 396 - -
Lac2g0466 444 Gene3D - 90 131 - -
Lac2g0466 444 SMART iq_5 111 132 IPR000048 GO:0005515(InterPro)
Lac2g0466 444 SMART iq_5 88 110 IPR000048 GO:0005515(InterPro)
Lac2g0466 444 FunFam IQ-domain 11 88 139 - -
Lac2g0466 444 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515(InterPro)
Lac2g0466 444 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0466 Lac-Chr2:3405215 Lac3g1549 Lac-Chr3:14563680 4.60E-42 dispersed
Lac2g0466 Lac-Chr2:3405215 Lac4g2992 Lac-Chr4:48162938 3.80E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0466 - - - 0.0