Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0482 ATGAGCCTGGATGCAGCTGAGGATGAATCAACTTCAGAAATTCATATTCCTGCAGAGATTGATTGGGATATGCTAGACAAATCCAAATTCTTTTTTCTGGGTGCTGCTTTGTTTTCAGGTGTATCAACTGCCCTTTACCCTATTGTTGTTTTGAAAACTCGGCTTCAGGTTTCTGCAACCAAGCTATCTAGCTTTAAAATGTCATATTCTATCATGCGCCATGAAGGCTTAAGAGGGTTTTACAAAGGATTTGGAACCTCTTTAATGGGAACTATCCCAGCTCGAGCCTTTTACATGGCAGCTCTTGAAGTTACCAAGAGTGGCGTTGGAAGTGCAACGGTTAGGCTAGGCTTTTCAGACACCACAGCCATGGCCATAGCTAATGGAGCTGCAGGGTTGAGCTCGGCCATGGCTGCTCAATTGGTATGGACTCCAATAGACGTTGTGAGCCAAAGATTGATGGTTCAGGGCTGCACTATTAGTGGCAAAAACAGTGTATCTAATCTTAATACTTGCGTCTATAAAAATGGTATTGACGCTTTCAGAAAGATTATTTATGCTGATGGTTTGCGAGGATTATACAGGGGATTTGGGATTTCAATCTTGACATATGCTCCATCAAATGCAGTGTGGTGGGCTTCTTACTCTGTAGCTCACAGGCTCATTTGGAGTGGTCTAGGCTACTACAATAGTAAGAAGGATGAGAGTTGTATTAATGGTGGCTATGGCTTTAAAGCAGATTCTAAGGCAACAGTGGCAATTCAGGGGTTGAGTGCAGCCTTGGCTAGTGGGGTTTCTGCTATCATAACAATGCCACTGGATACCATCAAAACTAGATTGCAAGTTTTGGATGCAGAAGAAAATGGCCAAAGACGCCCCCTAACAGCATTGCAGACCATAAGGAACTTGGTGAAGGAAGGTGGGCTGAACGCTTGTTACAGAGGGCTTGGACCGAGGTGGGCTTCGATGGCCATGTCGGCCACCACCATGATCACGACCTATGAGTTTCTCAAACGGCTATCTGCTAAGAACCAAGATTGTTTGAGATGA 1050 44.48 MSLDAAEDESTSEIHIPAEIDWDMLDKSKFFFLGAALFSGVSTALYPIVVLKTRLQVSATKLSSFKMSYSIMRHEGLRGFYKGFGTSLMGTIPARAFYMAALEVTKSGVGSATVRLGFSDTTAMAIANGAAGLSSAMAAQLVWTPIDVVSQRLMVQGCTISGKNSVSNLNTCVYKNGIDAFRKIIYADGLRGLYRGFGISILTYAPSNAVWWASYSVAHRLIWSGLGYYNSKKDESCINGGYGFKADSKATVAIQGLSAALASGVSAIITMPLDTIKTRLQVLDAEENGQRRPLTALQTIRNLVKEGGLNACYRGLGPRWASMAMSATTMITTYEFLKRLSAKNQDCLR 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3519883 3520932 + Lag0037120.1 Lac2g0482 597746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0482 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 6 346 - -
Lac2g0482 349 SUPERFAMILY Mitochondrial carrier 23 337 IPR023395 -
Lac2g0482 349 Gene3D Mitochondrial carrier domain 30 347 IPR023395 -
Lac2g0482 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 221 IPR018108 -
Lac2g0482 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 250 340 IPR018108 -
Lac2g0482 349 PRINTS Mitochondrial carrier protein signature 40 58 IPR002067 GO:0055085(InterPro)
Lac2g0482 349 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085(InterPro)
Lac2g0482 349 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085(InterPro)
Lac2g0482 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Lac2g0482 349 Pfam Mitochondrial carrier protein 250 343 IPR018108 -
Lac2g0482 349 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Lac2g0482 349 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0482 Lac-Chr2:3519883 Lac8g2759 Lac-Chr8:44904718 2.50E-67 dispersed
Lac2g0482 Lac-Chr2:3519883 Lac4g3001 Lac-Chr4:48277704 5.10E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0482 K15121 - csv:101213436 632.098