Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0519 ATGAACGGCCACGGCCACTCCAATCGCTCTTCGAAAACTCGCACGGTCGCATTGACTCAGTCCTACCGTTCTAGTTCAACTTGGGCGGCTCCACGGTCATGCGAGGAACGGCTTATTCCTTTCGCATCTGTAACGATAGCTACTAGATATTTTTTGTTTGTTTTCCTTTTTGTTTGTTCCATTTTGATCGAAGAGATTGGAGCTGGGCATTTTCAGAGCCTAGACAATATGGGCTATCTGAATTCGGTCTTGTCTTGCTCGAGCCAGATTCATGCTGCTGAGGAGGCACCTGTAAGCGGCGGGGGATTAAGTCAGAATGGTAAGTTCAGCTACGGATATGCTAGCTCTCCAGGGAAGAGATCTTCGATGGAAGATTTTTATGAGACGCGAATAGATGGCGTGGAAGGAGAAATAGTTGGTCTATTTGGTGTTTTCGATGGTCATGGTGGAGCACGAGCTGCGGAGTATGTTAAGCACAATCTTTTTAGTAATTTGATCAGGCATCCAAAGTTTATATCAGATACCAAATCCGCTATATCTGATGCATACAACCATACAGACACAGAATTTCTTAAGTCTGAAAATAACCAAAACAGGGATGCTGGATCAACTGCTTCCACTGCCATTCTAGTTGGTGACCGCTTACTTGTTGCAAATGTGGGCGATTCAAGAGCTGTTATTTGCCGGGGTGGCACTGCCATTGCTGTCTCTCGGGATCATAAGCCTGACCAAACTGATGAGCGACGACGAATTGAGGATGCAGGAGGATTTGTGATGTGGGCTGGAACTTGGAGAGTTGGAGGCGTTCTTGCTGTTTCACGGGCATTTGGTGATAGGTTGTTAAAGCAATATGTTGTTGCTGACCCTGAAATTCAGGAGGAAAAGATTGATAGCTCGCTCGAGTTTCTTATACTTGCAAGTGATGGACTGTGGGATGTCGTCTCTAATGAGGAAGCTGTTGCTATGACTAAACCAATTCAGGACCCAGAAGAGGCGGCGAAGAGGTTGATGCAAGAAGCATATCAGAGAGGCAGTGCAGATAACATTACTTGCGTCGTCGTCCGTTTCTTGGCAAACCAAGGAAGTCCCTCTCGCGGGACTTCTGGTAATGTTGGGTTCGTAGTCATAGGAAATTCCAGTAACATTGTTGATTGTACTTATAAAAAGGATAGACATAACGAGAAGTTATCAGTTGTCGTCAGCCCTTTCTAA 1212 45.54 MNGHGHSNRSSKTRTVALTQSYRSSSTWAAPRSCEERLIPFASVTIATRYFLFVFLFVCSILIEEIGAGHFQSLDNMGYLNSVLSCSSQIHAAEEAPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAISDAYNHTDTEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMTKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGSPSRGTSGNVGFVVIGNSSNIVDCTYKKDRHNEKLSVVVSPF 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3855998 3861054 - Lag0037157.1 Lac2g0519 597783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0519 403 ProSiteProfiles PPM-type phosphatase domain profile. 110 356 IPR001932 -
Lac2g0519 403 SUPERFAMILY PP2C-like 104 356 IPR036457 -
Lac2g0519 403 ProSitePatterns PPM-type phosphatase domain signature. 141 149 IPR000222 GO:0043169(InterPro)
Lac2g0519 403 FunFam probable protein phosphatase 2C 59 102 360 - -
Lac2g0519 403 CDD PP2Cc 109 356 IPR001932 -
Lac2g0519 403 Pfam Protein phosphatase 2C 139 349 IPR001932 -
Lac2g0519 403 SMART PP2C_4 100 354 IPR001932 -
Lac2g0519 403 PANTHER PROTEIN PHOSPHATASE 95 355 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lac2g0519 403 Gene3D - 102 361 IPR036457 -
Lac2g0519 403 SMART PP2C_SIG_2 121 356 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2264 Lac-Chr10:34333179 Lac2g0519 Lac-Chr2:3855998 2.40E-34 dispersed
Lac2g0519 Lac-Chr2:3855998 Lac8g1754 Lac-Chr8:35770777 1.30E-99 dispersed
Lac2g0519 Lac-Chr2:3855998 Lac2g0725 Lac-Chr2:5585682 1.60E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0519 K17506 - csv:101216117 576.63