Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0521 ATGGCAGAAACGGCGTCGTATTTGAAGATGTGCAAGTTTTTTACTCTTCTGCTTCTGTCTGTTCCGGCGACGGCGGCCTTATCGTTCGGCTTCTATGCTGCCACGTGTCCTGCGGCGGAGTTTATGGTCAGGAACACCGTCAGATCGGCTTCCTCCGTTGACCCCACCGTCCCCGGCAAGCTCCTCCGGTTGCTCTTCCATGACTGTTTTGTTGAGGGGTGTGACGCTTCTGTATTGCTCCAAGGAAACGGAACAGAACGGAGCGATCCGGCAAACGGGTCTCTGGGAGGATTTGAAGTAATCGATTCAGCTAAGAGAGCTCTGGAATTTTTCTGTCCTGGAACTGTTTCCTGTGCCGACATTGTCGTTTTGGCCGCCAGAGATGCCGTTGAATTCGCCGGCGGGCCGTCCGTCGAAGTCCCAACCGGCCGGCGAGACGGAAGGATATCGGCGGCGACAAACGTCCGACCAAACATCGTCGACACAAGCTTTTCCGTCGACCAAATGATGAGCCTCTTCTCATCAAAAGGACTGTCGGCGGACGACCTCGTCATTCTCTCTGGGGCCCACACAATCGGAACGGCCCACTGCAGCGCCTTCAGCGACCGCTTCAGAAGAGGCCCAAACGGCCAACTGACCCTCATCGACGCCTCTCTCGACGGCGCTTACGCCAACGAGCTCATGCGGCGGTGCCCGGCCGGCGCCGCCCCTGCCGTCACCGTGGAAAACGATCCGGCGACGGCGTTTGTGTTCGACAATCAGTACTACAAAAACATTCTGTCGCACAAAGGGCTGTTTCAGTCGGATTCCGTTCTGATAAGCGACCGCCGGACCAGGGCCCAAGTGGAGAGCTTAGCGAAGGATCAGATTGGGTTTTTTGAAGATTGGGCCCAGTCGTTCTTGAAACTTAGCAGTATTGGAGTTAAAAGTGGGGAAGAAGGGGAAATTAGAGTGTCTTGTTCTACTAATAATGTTTGA 978 55.11 MAETASYLKMCKFFTLLLLSVPATAALSFGFYAATCPAAEFMVRNTVRSASSVDPTVPGKLLRLLFHDCFVEGCDASVLLQGNGTERSDPANGSLGGFEVIDSAKRALEFFCPGTVSCADIVVLAARDAVEFAGGPSVEVPTGRRDGRISAATNVRPNIVDTSFSVDQMMSLFSSKGLSADDLVILSGAHTIGTAHCSAFSDRFRRGPNGQLTLIDASLDGAYANELMRRCPAGAAPAVTVENDPATAFVFDNQYYKNILSHKGLFQSDSVLISDRRTRAQVESLAKDQIGFFEDWAQSFLKLSSIGVKSGEEGEIRVSCSTNNV 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3899815 3902414 - Lag0037159.1 Lac2g0521 597785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0521 325 CDD secretory_peroxidase 27 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac2g0521 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 FunFam Peroxidase 160 303 - -
Lac2g0521 325 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 Gene3D - 30 324 - -
Lac2g0521 325 FunFam Peroxidase 30 170 - -
Lac2g0521 325 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Lac2g0521 325 Gene3D Peroxidase, domain 2 160 303 - -
Lac2g0521 325 PANTHER - 14 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g0521 325 Pfam Peroxidase 43 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0521 Lac-Chr2:3899815 Lac8g2981 Lac-Chr8:46682092 1.30E-65 dispersed
Lac9g2538 Lac-Chr9:44027022 Lac2g0521 Lac-Chr2:3899815 3.00E-14 dispersed
Lac2g0521 Lac-Chr2:3899815 Lac6g0525 Lac-Chr6:4368056 5.60E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0521 K00430 - csv:101211842 557.37