Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0531 ATGCAGGCAGATCAGACGGGGATAAGTTTGAGACCAGGTGGCGGCGGTGGCCTTCGTGGAAGCAGATTTGTTACCCCTCGCTTCGATTCCTCCTCCGCCGATTCTTCGTCGCTTCGTCCTCATGGCGGCGTTTCGCAAATCCTCAAGACTGGAGATCTACGGTTTGAAGGTCGTGAACGAATCCAGTACACTCGAGACCAGCTTCTGCAGCTCAGGGAGGTTGCAACAGTCCCCGAGGATATCTTGAAGGTCAAACTAGAAGTTGAGACTGAGATTGTTGGGGAGGATCAAACATGGGCTCGTGCTGAAAGCAATCAGCAATCACAATCTCAAGGCCGTTACTTTGAGCCAGACAATCGAGATTGGCGTGGTCGATCTGGACAGTTACCTGCGTCCACGGAGGAAGGATTTTGGGAGGCAAGTCGCGAGAACAAGGATTTATCAGGACAATCTGAGTCGAGATTCCAAGATTCAAATAATAGGAGCCAAGTTTCTGGTAACCAAGGGGTCGGTACTGCAACTGCCCTTATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGAAAAGGAACGTGTTTTGAAGACAGTAAAAGGTATACTTAATAAATTGACTCCAGAAAAGTTTGACGTACTCAAAGGTCAATTGATTGACTCTGGAATTACATCAGCTGATATTTTGAAGGATGTTATATCTCTTATATTTGAGAAGGCCGTGTTTGAGCCCACATTTTGCCCTATGTATGCACTGTTGTGCTCTGACCTTAACGAGAAGCTTCCTTCATTTTCATCTGATGAGCCTGGAGGGAAAGATATCACTTTTAAACGAGTTCTCTTAAATATTTGCCAAGAAGCATTTGAAGGTGCTGATAATCTGAGGGCAGAAATCAGGCAGATGACTAATCCTGAGCATGACATTGAAAGAAGAGACAAAGAAAGAATGGTCAAGCTTCGAACTCTAGGTAACATTCGCCTGATAGGTGAGCTTCTAAAACAGAAGATGGTGCCTGAAAAGATCGTTCACCATATTGTTCTGGAGCTGTTGGGGCCTGACACTAAAGCATGCCCTGCTGAGGAGAATGTTGAGGCTATTAGTCAGTTTTTTAACACAATTGGTAAGCAGCTGGATGAGAGCCCAAAATCACGACGGGTCAATGATTTATATTTCAGCCGGTTGAAGGACCTCACTACAAACTCCCAACTAGCTCCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTACGGGCCAACAACTGGGTTCCCAGACGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATACAGAGGCTGAGAAGAATCTAGGGCTTCGTCCGGGTTCAATTGCAATGATGAGAAATGGCCGTAATGCCGAGGCACTTGGGGGATTAAGTCCTGGTGGTTTTCCTGTTGCCCGACCTGGTTTTGGGGGTATGATGCCCGGAATGCCTGGAACCAGGAAAATGCCTGGTATGCCTGGACTGGATTCAGACAATTGGGAGGTTCCTAGATCCCGATCAATGCCAAGGGGCGAAAGCGGAGGTCATACTCAGGCTTCCGCACGTGTCCAGTCACCATTAATCAGCAAAACACCTTCAATTAATTCAAAATATCTACCTCAGGGGAGTGGTGGTGTAATAACTGGTAAAACAAGTGCCTTGCTACAGGGTAGTGCTGCATCTCCTGCCCGACCAAGTTCCATCCAAGGAACTCAGCCTGTTGCTCACAACCCTAGACCGGTTGCTCCAGTTGCACCAGCTGTATCCTCCCCTCCGAAGCCAACAGCTCCTGCTGTAGTATCCCATTCTGCTGATCTTCACAAGAAAACCGTTTCGCTGCTCGAGGAATACTTCAGTGTACGGATTCTCGATGAAGCTCTACAGTGTGTAGAGGAGCTGAAATCCCCAGCTTATCACCCTGAGGTTGTTAAAGAATCTCTTATCATAGCACTTGAAAAGATTCCTCCATGTGTAGACCCAGTTGTTAAGCTTCTTGAGCATTTGCTTCACAAGAATGTCTTGACTGCAAAGGATATAGGTACTGGATGCCTTCTATACGGATCAATGATGGATGATATCGGCATCGATCTACCAAAAGCACCAAACAATTTTGGTGAGATTCTCGGGAAGTTGATTTTGATCGGGGGTCTCGATTTCACGGTCGTGAAGGAGATTCTTACCAAGCTGGAAGATGACTACTTCCAGAAATCCATTTTTGGTGGTGCTATGAAGAGCCTCAACTCTAGCCCTTCTGGAGAAGGAATTCTGGCAACTCAAAGTGTTGAGATCCAGGCATGTGAGGATTTACTTGCGTGA 2328 46.35 MQADQTGISLRPGGGGGLRGSRFVTPRFDSSSADSSSLRPHGGVSQILKTGDLRFEGRERIQYTRDQLLQLREVATVPEDILKVKLEVETEIVGEDQTWARAESNQQSQSQGRYFEPDNRDWRGRSGQLPASTEEGFWEASRENKDLSGQSESRFQDSNNRSQVSGNQGVGTATALIKAEVPWSVRRGNISEKERVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPSFSSDEPGGKDITFKRVLLNICQEAFEGADNLRAEIRQMTNPEHDIERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDTKACPAEENVEAISQFFNTIGKQLDESPKSRRVNDLYFSRLKDLTTNSQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHTEAEKNLGLRPGSIAMMRNGRNAEALGGLSPGGFPVARPGFGGMMPGMPGTRKMPGMPGLDSDNWEVPRSRSMPRGESGGHTQASARVQSPLISKTPSINSKYLPQGSGGVITGKTSALLQGSAASPARPSSIQGTQPVAHNPRPVAPVAPAVSSPPKPTAPAVVSHSADLHKKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKESLIIALEKIPPCVDPVVKLLEHLLHKNVLTAKDIGTGCLLYGSMMDDIGIDLPKAPNNFGEILGKLILIGGLDFTVVKEILTKLEDDYFQKSIFGGAMKSLNSSPSGEGILATQSVEIQACEDLLA 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3970705 3975661 + Lag0037169.1 Lac2g0531 597795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0531 775 MobiDBLite consensus disorder prediction 99 115 - -
Lac2g0531 775 Gene3D - 188 423 - -
Lac2g0531 775 SMART ma3_7 610 722 IPR003891 -
Lac2g0531 775 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 56 772 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
Lac2g0531 775 MobiDBLite consensus disorder prediction 151 169 - -
Lac2g0531 775 MobiDBLite consensus disorder prediction 25 43 - -
Lac2g0531 775 MobiDBLite consensus disorder prediction 1 44 - -
Lac2g0531 775 Gene3D - 606 764 - -
Lac2g0531 775 Pfam MIF4G domain 197 422 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Lac2g0531 775 MobiDBLite consensus disorder prediction 515 543 - -
Lac2g0531 775 FunFam Eukaryotic translation initiation factor isoform 4G-2 188 423 - -
Lac2g0531 775 Pfam MA3 domain 611 722 IPR003891 -
Lac2g0531 775 SMART if4_15 197 422 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Lac2g0531 775 MobiDBLite consensus disorder prediction 500 543 - -
Lac2g0531 775 SUPERFAMILY ARM repeat 190 425 IPR016024 -
Lac2g0531 775 ProSiteProfiles MI domain profile. 609 731 IPR003891 -
Lac2g0531 775 SUPERFAMILY ARM repeat 608 761 IPR016024 -
Lac2g0531 775 MobiDBLite consensus disorder prediction 560 578 - -
Lac2g0531 775 MobiDBLite consensus disorder prediction 99 169 - -
Lac2g0531 775 MobiDBLite consensus disorder prediction 560 583 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g1976 Lac-Chr12:36659710 Lac2g0531 Lac-Chr2:3970705 2.30E-50 dispersed
Lac2g0531 Lac-Chr2:3970705 Lac7g0417 Lac-Chr7:3244527 8.30E-55 dispersed
Lac2g0531 Lac-Chr2:3970705 Lac3g0227 Lac-Chr3:1594054 2.80E-292 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0531 K03260 - csv:101211356 1264.98