Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g0531 | ATGCAGGCAGATCAGACGGGGATAAGTTTGAGACCAGGTGGCGGCGGTGGCCTTCGTGGAAGCAGATTTGTTACCCCTCGCTTCGATTCCTCCTCCGCCGATTCTTCGTCGCTTCGTCCTCATGGCGGCGTTTCGCAAATCCTCAAGACTGGAGATCTACGGTTTGAAGGTCGTGAACGAATCCAGTACACTCGAGACCAGCTTCTGCAGCTCAGGGAGGTTGCAACAGTCCCCGAGGATATCTTGAAGGTCAAACTAGAAGTTGAGACTGAGATTGTTGGGGAGGATCAAACATGGGCTCGTGCTGAAAGCAATCAGCAATCACAATCTCAAGGCCGTTACTTTGAGCCAGACAATCGAGATTGGCGTGGTCGATCTGGACAGTTACCTGCGTCCACGGAGGAAGGATTTTGGGAGGCAAGTCGCGAGAACAAGGATTTATCAGGACAATCTGAGTCGAGATTCCAAGATTCAAATAATAGGAGCCAAGTTTCTGGTAACCAAGGGGTCGGTACTGCAACTGCCCTTATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGAAAAGGAACGTGTTTTGAAGACAGTAAAAGGTATACTTAATAAATTGACTCCAGAAAAGTTTGACGTACTCAAAGGTCAATTGATTGACTCTGGAATTACATCAGCTGATATTTTGAAGGATGTTATATCTCTTATATTTGAGAAGGCCGTGTTTGAGCCCACATTTTGCCCTATGTATGCACTGTTGTGCTCTGACCTTAACGAGAAGCTTCCTTCATTTTCATCTGATGAGCCTGGAGGGAAAGATATCACTTTTAAACGAGTTCTCTTAAATATTTGCCAAGAAGCATTTGAAGGTGCTGATAATCTGAGGGCAGAAATCAGGCAGATGACTAATCCTGAGCATGACATTGAAAGAAGAGACAAAGAAAGAATGGTCAAGCTTCGAACTCTAGGTAACATTCGCCTGATAGGTGAGCTTCTAAAACAGAAGATGGTGCCTGAAAAGATCGTTCACCATATTGTTCTGGAGCTGTTGGGGCCTGACACTAAAGCATGCCCTGCTGAGGAGAATGTTGAGGCTATTAGTCAGTTTTTTAACACAATTGGTAAGCAGCTGGATGAGAGCCCAAAATCACGACGGGTCAATGATTTATATTTCAGCCGGTTGAAGGACCTCACTACAAACTCCCAACTAGCTCCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTACGGGCCAACAACTGGGTTCCCAGACGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATACAGAGGCTGAGAAGAATCTAGGGCTTCGTCCGGGTTCAATTGCAATGATGAGAAATGGCCGTAATGCCGAGGCACTTGGGGGATTAAGTCCTGGTGGTTTTCCTGTTGCCCGACCTGGTTTTGGGGGTATGATGCCCGGAATGCCTGGAACCAGGAAAATGCCTGGTATGCCTGGACTGGATTCAGACAATTGGGAGGTTCCTAGATCCCGATCAATGCCAAGGGGCGAAAGCGGAGGTCATACTCAGGCTTCCGCACGTGTCCAGTCACCATTAATCAGCAAAACACCTTCAATTAATTCAAAATATCTACCTCAGGGGAGTGGTGGTGTAATAACTGGTAAAACAAGTGCCTTGCTACAGGGTAGTGCTGCATCTCCTGCCCGACCAAGTTCCATCCAAGGAACTCAGCCTGTTGCTCACAACCCTAGACCGGTTGCTCCAGTTGCACCAGCTGTATCCTCCCCTCCGAAGCCAACAGCTCCTGCTGTAGTATCCCATTCTGCTGATCTTCACAAGAAAACCGTTTCGCTGCTCGAGGAATACTTCAGTGTACGGATTCTCGATGAAGCTCTACAGTGTGTAGAGGAGCTGAAATCCCCAGCTTATCACCCTGAGGTTGTTAAAGAATCTCTTATCATAGCACTTGAAAAGATTCCTCCATGTGTAGACCCAGTTGTTAAGCTTCTTGAGCATTTGCTTCACAAGAATGTCTTGACTGCAAAGGATATAGGTACTGGATGCCTTCTATACGGATCAATGATGGATGATATCGGCATCGATCTACCAAAAGCACCAAACAATTTTGGTGAGATTCTCGGGAAGTTGATTTTGATCGGGGGTCTCGATTTCACGGTCGTGAAGGAGATTCTTACCAAGCTGGAAGATGACTACTTCCAGAAATCCATTTTTGGTGGTGCTATGAAGAGCCTCAACTCTAGCCCTTCTGGAGAAGGAATTCTGGCAACTCAAAGTGTTGAGATCCAGGCATGTGAGGATTTACTTGCGTGA | 2328 | 46.35 | MQADQTGISLRPGGGGGLRGSRFVTPRFDSSSADSSSLRPHGGVSQILKTGDLRFEGRERIQYTRDQLLQLREVATVPEDILKVKLEVETEIVGEDQTWARAESNQQSQSQGRYFEPDNRDWRGRSGQLPASTEEGFWEASRENKDLSGQSESRFQDSNNRSQVSGNQGVGTATALIKAEVPWSVRRGNISEKERVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPSFSSDEPGGKDITFKRVLLNICQEAFEGADNLRAEIRQMTNPEHDIERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDTKACPAEENVEAISQFFNTIGKQLDESPKSRRVNDLYFSRLKDLTTNSQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHTEAEKNLGLRPGSIAMMRNGRNAEALGGLSPGGFPVARPGFGGMMPGMPGTRKMPGMPGLDSDNWEVPRSRSMPRGESGGHTQASARVQSPLISKTPSINSKYLPQGSGGVITGKTSALLQGSAASPARPSSIQGTQPVAHNPRPVAPVAPAVSSPPKPTAPAVVSHSADLHKKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKESLIIALEKIPPCVDPVVKLLEHLLHKNVLTAKDIGTGCLLYGSMMDDIGIDLPKAPNNFGEILGKLILIGGLDFTVVKEILTKLEDDYFQKSIFGGAMKSLNSSPSGEGILATQSVEIQACEDLLA | 775 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3970705 | 3975661 | + | Lag0037169.1 | Lac2g0531 | 597795 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g0531 | 775 | MobiDBLite | consensus disorder prediction | 99 | 115 | - | - | |
Lac2g0531 | 775 | Gene3D | - | 188 | 423 | - | - | |
Lac2g0531 | 775 | SMART | ma3_7 | 610 | 722 | IPR003891 | - | |
Lac2g0531 | 775 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 56 | 772 | IPR045208 | GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER) | |
Lac2g0531 | 775 | MobiDBLite | consensus disorder prediction | 151 | 169 | - | - | |
Lac2g0531 | 775 | MobiDBLite | consensus disorder prediction | 25 | 43 | - | - | |
Lac2g0531 | 775 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Lac2g0531 | 775 | Gene3D | - | 606 | 764 | - | - | |
Lac2g0531 | 775 | Pfam | MIF4G domain | 197 | 422 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Lac2g0531 | 775 | MobiDBLite | consensus disorder prediction | 515 | 543 | - | - | |
Lac2g0531 | 775 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 188 | 423 | - | - | |
Lac2g0531 | 775 | Pfam | MA3 domain | 611 | 722 | IPR003891 | - | |
Lac2g0531 | 775 | SMART | if4_15 | 197 | 422 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Lac2g0531 | 775 | MobiDBLite | consensus disorder prediction | 500 | 543 | - | - | |
Lac2g0531 | 775 | SUPERFAMILY | ARM repeat | 190 | 425 | IPR016024 | - | |
Lac2g0531 | 775 | ProSiteProfiles | MI domain profile. | 609 | 731 | IPR003891 | - | |
Lac2g0531 | 775 | SUPERFAMILY | ARM repeat | 608 | 761 | IPR016024 | - | |
Lac2g0531 | 775 | MobiDBLite | consensus disorder prediction | 560 | 578 | - | - | |
Lac2g0531 | 775 | MobiDBLite | consensus disorder prediction | 99 | 169 | - | - | |
Lac2g0531 | 775 | MobiDBLite | consensus disorder prediction | 560 | 583 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g1976 | Lac-Chr12:36659710 | Lac2g0531 | Lac-Chr2:3970705 | 2.30E-50 | dispersed | |
Lac2g0531 | Lac-Chr2:3970705 | Lac7g0417 | Lac-Chr7:3244527 | 8.30E-55 | dispersed | |
Lac2g0531 | Lac-Chr2:3970705 | Lac3g0227 | Lac-Chr3:1594054 | 2.80E-292 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac2g0531 | K03260 | - | csv:101211356 | 1264.98 |