Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0532 ATGGGTATTTACCTCAGCAATCCTAAAACTGAGAAGTCCTCTGAAGATGGTGAGAATAGACGGCTTAGATATGGACTATCATCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCAATTCCTGATCTGGATGCTTGCACTTCCTTCTTTGGTGTTTATGATGGCCATGGAGGTAAGGTGGTTGCAAAGTTCTGTGCCAAGTATCTACATCAGCAAGTGAAGAAAAATGAAGCTTATGCAGCTGGAGATATAGGAACGTCTGTGCAGAAAGCATACTTAAGAATGGATGAAATGATGCGTGGACAAAGAGGTTGGAGAGAATTAGCTGTTTTGGGTGATAGATTGAACAAGTTCACTGGCATGATAGAAGGGTTAATCTGGTCACCAAGAAGTAGTGATGCAAATGACCAGTCTGATGATTGGGCCTTTGAGGAGGGTCCGCACTCTGATTTTTCTGGCCCAACTTCGGGGTGTACAGCTTGTGTTGCAATTATTAGAAATAACAAACTTGTTGTTGCAAATGCTGGTGATTCTCGTTGTGTGATATCAAGAAAGGGCCAGGCTCATAGTCTCTCTAGAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGAATTCTGAAAGCTGGTGGTTTTATTCATGCTGGACGAGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGACATGGAATTTAAGCAGAATAAATTTTTACCTGCTGAAAAGCAAATAATCACTGCAAATCCTGATGTAACCACTGTTGAGCTCTGTGACGATGACGAGTTTATTGTGATAGCATGTGATGGGATATGGGATTGCATGTCTAACCAGCATCTGGTAGATTTTATACATGAACAGCTAAAAACAGAAAGTAAACTCTCTGTGGTTGTTGAGAGAGTACTTGATAGGTGTTTGGCACCTTCCACAGCTGGTGGTGAGGGCTGTGATAACATGACCATGATTTTGGTGCAGCTTAAGAAAGATATCCAATCAAACTCCTCCATTGATGAGCAAGCCTCACCCGCTACCACCGCAACCGAACCAGACAGTACCGAATCAAACTAG 1077 43.27 MGIYLSNPKTEKSSEDGENRRLRYGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHGGKVVAKFCAKYLHQQVKKNEAYAAGDIGTSVQKAYLRMDEMMRGQRGWRELAVLGDRLNKFTGMIEGLIWSPRSSDANDQSDDWAFEEGPHSDFSGPTSGCTACVAIIRNNKLVVANAGDSRCVISRKGQAHSLSRDHKPDLEVEKDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQHLVDFIHEQLKTESKLSVVVERVLDRCLAPSTAGGEGCDNMTMILVQLKKDIQSNSSIDEQASPATTATEPDSTESN 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3980739 3986876 + Lag0037170.1 Lac2g0532 597796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0532 358 PANTHER PROTEIN PHOSPHATASE 2C 19 330 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Lac2g0532 358 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Lac2g0532 358 CDD PP2Cc 23 329 IPR001932 -
Lac2g0532 358 MobiDBLite consensus disorder prediction 336 358 - -
Lac2g0532 358 Gene3D - 1 330 IPR036457 -
Lac2g0532 358 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Lac2g0532 358 SMART PP2C_4 13 327 IPR001932 -
Lac2g0532 358 Pfam Protein phosphatase 2C 136 313 IPR001932 -
Lac2g0532 358 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Lac2g0532 358 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0532 Lac-Chr2:3980739 Lac4g2563 Lac-Chr4:44802793 1.50E-30 dispersed
Lac2g0068 Lac-Chr2:491992 Lac2g0532 Lac-Chr2:3980739 1.00E-32 transposed
Lac2g0532 Lac-Chr2:3980739 Lac4g2737 Lac-Chr4:46274237 2.30E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0532 K17499 - csv:101211604 662.914