Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g0532 | ATGGGTATTTACCTCAGCAATCCTAAAACTGAGAAGTCCTCTGAAGATGGTGAGAATAGACGGCTTAGATATGGACTATCATCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCAATTCCTGATCTGGATGCTTGCACTTCCTTCTTTGGTGTTTATGATGGCCATGGAGGTAAGGTGGTTGCAAAGTTCTGTGCCAAGTATCTACATCAGCAAGTGAAGAAAAATGAAGCTTATGCAGCTGGAGATATAGGAACGTCTGTGCAGAAAGCATACTTAAGAATGGATGAAATGATGCGTGGACAAAGAGGTTGGAGAGAATTAGCTGTTTTGGGTGATAGATTGAACAAGTTCACTGGCATGATAGAAGGGTTAATCTGGTCACCAAGAAGTAGTGATGCAAATGACCAGTCTGATGATTGGGCCTTTGAGGAGGGTCCGCACTCTGATTTTTCTGGCCCAACTTCGGGGTGTACAGCTTGTGTTGCAATTATTAGAAATAACAAACTTGTTGTTGCAAATGCTGGTGATTCTCGTTGTGTGATATCAAGAAAGGGCCAGGCTCATAGTCTCTCTAGAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGAATTCTGAAAGCTGGTGGTTTTATTCATGCTGGACGAGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGACATGGAATTTAAGCAGAATAAATTTTTACCTGCTGAAAAGCAAATAATCACTGCAAATCCTGATGTAACCACTGTTGAGCTCTGTGACGATGACGAGTTTATTGTGATAGCATGTGATGGGATATGGGATTGCATGTCTAACCAGCATCTGGTAGATTTTATACATGAACAGCTAAAAACAGAAAGTAAACTCTCTGTGGTTGTTGAGAGAGTACTTGATAGGTGTTTGGCACCTTCCACAGCTGGTGGTGAGGGCTGTGATAACATGACCATGATTTTGGTGCAGCTTAAGAAAGATATCCAATCAAACTCCTCCATTGATGAGCAAGCCTCACCCGCTACCACCGCAACCGAACCAGACAGTACCGAATCAAACTAG | 1077 | 43.27 | MGIYLSNPKTEKSSEDGENRRLRYGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHGGKVVAKFCAKYLHQQVKKNEAYAAGDIGTSVQKAYLRMDEMMRGQRGWRELAVLGDRLNKFTGMIEGLIWSPRSSDANDQSDDWAFEEGPHSDFSGPTSGCTACVAIIRNNKLVVANAGDSRCVISRKGQAHSLSRDHKPDLEVEKDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQHLVDFIHEQLKTESKLSVVVERVLDRCLAPSTAGGEGCDNMTMILVQLKKDIQSNSSIDEQASPATTATEPDSTESN | 358 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3980739 | 3986876 | + | Lag0037170.1 | Lac2g0532 | 597796 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g0532 | 358 | PANTHER | PROTEIN PHOSPHATASE 2C | 19 | 330 | IPR015655 | GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro) | |
Lac2g0532 | 358 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 329 | IPR001932 | - | |
Lac2g0532 | 358 | CDD | PP2Cc | 23 | 329 | IPR001932 | - | |
Lac2g0532 | 358 | MobiDBLite | consensus disorder prediction | 336 | 358 | - | - | |
Lac2g0532 | 358 | Gene3D | - | 1 | 330 | IPR036457 | - | |
Lac2g0532 | 358 | SUPERFAMILY | PP2C-like | 3 | 330 | IPR036457 | - | |
Lac2g0532 | 358 | SMART | PP2C_4 | 13 | 327 | IPR001932 | - | |
Lac2g0532 | 358 | Pfam | Protein phosphatase 2C | 136 | 313 | IPR001932 | - | |
Lac2g0532 | 358 | Pfam | Protein phosphatase 2C | 23 | 104 | IPR001932 | - | |
Lac2g0532 | 358 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g0532 | Lac-Chr2:3980739 | Lac4g2563 | Lac-Chr4:44802793 | 1.50E-30 | dispersed | |
Lac2g0068 | Lac-Chr2:491992 | Lac2g0532 | Lac-Chr2:3980739 | 1.00E-32 | transposed | |
Lac2g0532 | Lac-Chr2:3980739 | Lac4g2737 | Lac-Chr4:46274237 | 2.30E-164 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac2g0532 | K17499 | - | csv:101211604 | 662.914 |