Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g0633 | ATGAGTAGGGAAAACGTTACTTTTCAAGTTGAAGAGTGCTCTGGCAGAATCACGAGGGCACGGGCAAAAGAGCTAAGCGAATCAGGAGGCATTCTGTGCTCCTCAAAATCTTCTGGAGTTCAGAAGCACATTCTACGACCTAACTCAAAAAGAATGGCATCCGACGAGATTAATACTTGTTCAACTTCTTCCAATGGCCTTCCTAATAAAAGAAGAGCAGTGCTAAAGGATGTGACTAACATTTCCAGCAAAGGTTCTGATAAGAGTTGCATTAATACTTCTAATATTCAGGGTGCCAAACCAACTAGAAGAGTTTCTGCAAAAGCTAAGGCAAATGTGCCTTTAAATGTTTCTGTAGAAATTCTAGGAGCAGAAGAAGATGCAAACACAAGATTAGCCGAGGATTTATCTAAAATAAGGGTGGTAGAATCTCGAGAGGCATCTTTACGAGAAACTTTGGACAAAAAAGAGAGAACAATGCAAACTGTGTGTCACACCAGCAGAGAATGTGGAGTTTCAGATATGATTCTCTCTGCATCTTCAGAAGAATCTATCCCGCAGCCAAATGGAAAATATATGGCACCTGAACAATCGGGAGCATCAAATGATAGAGGCATTGTAGACATTGATTCAAACACAAAATGTCTTCAATCATGCAGCATATATGCTCCAGACATATATGACAGGATACGGGTGACGGAGCTTGATCAAAGGGCCTCAACTAACTATATGGAACAGTTGCAGCAAGATATCACTGCAAACATGCGAGGAATACTGGTTGATTGGCTTGTAGAGGTTTCTGAAGAATATAAGCTGGTTCCAGATACATTGTATCTCACTGTGAATGTTATTGATCGGTTTCTCTCCCAAAATTTTATTGAAAAAAAGCGTCTACAACTCCTCGGTGTTGCAAGCATGCTAATTGCATCAAAATACGAGGAGATTTGTGCTCCACGAGTGGAAGATTTCTGCTTCATTACAGATAACACTTACACAAAAGGAGAGGTTGTAGAAATGGAGAGTGAAGTTCTGAACTTACTGCACTTTCGGTTATCTGTTCCCACTACAAAGACGTTTCTAAGGAGATTCATACAATCAGCTCACGCTTCTTACAAGGTTCCTTGCATTGAACTTGAGTTTTTGGCCAATTATTTAGCTGAGTTGACTCTTGTTGAATACAGCTTCCTAAAGTTCCTTCCTTCTCTGATAGCCGCATCAGCCGTATTTCTTGCGAGATGGACACTTGACCAATCGGATCATCCGTGGAATCCAACTCTAGAGCACTATACCAGTTACAACGCTTCTGAGCTGAAAACTGCAGTGCTTGCCCTCCACGACTTGCAACTTAACACCAGTGCTTCCTCGCTAAATGCCATTCGTGAGAAGTATAGACAACCGAAGCTGATGTTTCCAAAACAGGAACAACACATCTATAAGTACAAGCCAATTCAAATGCGTAGCGAAATTAACATCCACTCGATCGGTTCTATCACTGTTTTGATTTCTGAAGAACAAGAACGATTCCATTCTTGCCAAAACTACAGGAGGATGTCCATCTTTTCAGTTGATCTGCCTCATTCTCCCTCTAACCTCCCCCAACTGTGA | 1605 | 41.37 | MSRENVTFQVEECSGRITRARAKELSESGGILCSSKSSGVQKHILRPNSKRMASDEINTCSTSSNGLPNKRRAVLKDVTNISSKGSDKSCINTSNIQGAKPTRRVSAKAKANVPLNVSVEILGAEEDANTRLAEDLSKIRVVESREASLRETLDKKERTMQTVCHTSRECGVSDMILSASSEESIPQPNGKYMAPEQSGASNDRGIVDIDSNTKCLQSCSIYAPDIYDRIRVTELDQRASTNYMEQLQQDITANMRGILVDWLVEVSEEYKLVPDTLYLTVNVIDRFLSQNFIEKKRLQLLGVASMLIASKYEEICAPRVEDFCFITDNTYTKGEVVEMESEVLNLLHFRLSVPTTKTFLRRFIQSAHASYKVPCIELEFLANYLAELTLVEYSFLKFLPSLIAASAVFLARWTLDQSDHPWNPTLEHYTSYNASELKTAVLALHDLQLNTSASSLNAIREKYRQPKLMFPKQEQHIYKYKPIQMRSEINIHSIGSITVLISEEQERFHSCQNYRRMSIFSVDLPHSPSNLPQL | 534 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4734814 | 4740536 | + | Lag0037271.1 | Lac2g0633 | 597897 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g0633 | 534 | ProSitePatterns | Cyclins signature. | 256 | 287 | IPR048258 | - | |
Lac2g0633 | 534 | FunFam | Mitotic cyclin 6 | 239 | 339 | - | - | |
Lac2g0633 | 534 | SMART | cyclin_7 | 358 | 446 | IPR013763 | - | |
Lac2g0633 | 534 | SMART | cyclin_7 | 261 | 345 | IPR013763 | - | |
Lac2g0633 | 534 | PANTHER | CYCLINS | 203 | 465 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Lac2g0633 | 534 | SUPERFAMILY | Cyclin-like | 217 | 351 | IPR036915 | - | |
Lac2g0633 | 534 | CDD | CYCLIN_AtCycA_like_rpt1 | 217 | 350 | - | - | |
Lac2g0633 | 534 | SMART | Cyclin_C_2 | 354 | 472 | IPR004367 | - | |
Lac2g0633 | 534 | Gene3D | - | 225 | 468 | - | - | |
Lac2g0633 | 534 | SUPERFAMILY | Cyclin-like | 353 | 469 | IPR036915 | - | |
Lac2g0633 | 534 | CDD | CYCLIN_AtCycA-like_rpt2 | 354 | 467 | - | - | |
Lac2g0633 | 534 | FunFam | Cyclin A1 | 341 | 470 | - | - | |
Lac2g0633 | 534 | Gene3D | - | 239 | 352 | - | - | |
Lac2g0633 | 534 | Pfam | Cyclin, C-terminal domain | 354 | 469 | IPR004367 | - | |
Lac2g0633 | 534 | Pfam | Cyclin, N-terminal domain | 225 | 352 | IPR006671 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g0367 | Lac-Chr2:2751758 | Lac2g0633 | Lac-Chr2:4734814 | 9.20E-77 | dispersed | |
Lac2g0633 | Lac-Chr2:4734814 | Lac8g1821 | Lac-Chr8:36495788 | 6.70E-80 | dispersed | |
Lac12g0033 | Lac-Chr12:483460 | Lac2g0633 | Lac-Chr2:4734814 | 5.90E-40 | transposed | |
Lac1g1551 | Lac-Chr1:36801481 | Lac2g0633 | Lac-Chr2:4734814 | 2.00E-40 | transposed | |
Lac1g3089 | Lac-Chr1:51370896 | Lac2g0633 | Lac-Chr2:4734814 | 4.50E-43 | transposed | |
Lac2g0092 | Lac-Chr2:703334 | Lac2g0633 | Lac-Chr2:4734814 | 7.20E-45 | transposed | |
Lac4g2834 | Lac-Chr4:46964845 | Lac2g0633 | Lac-Chr2:4734814 | 1.60E-105 | transposed | |
Lac9g2754 | Lac-Chr9:45728656 | Lac2g0633 | Lac-Chr2:4734814 | 3.20E-45 | transposed | |
Lac2g0633 | Lac-Chr2:4734814 | Lac6g1238 | Lac-Chr6:12008772 | 5.00E-107 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac2g0633 | K06627 | - | csv:101204275 | 816.609 |