Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0669 ATGCCGGGGCTAACCTGTAATGCCTGTAACAAAGAATTTCTAGACGCCGATGAACAAAAGCTTCACTACAAATCCGAATGGCATCGATACAATCTTAAGCGCAAGGTAGCTAATGTTCCTGGGGTTACAGAGGCATTATTTTTAGCTAGACAGTCTGCTGCTGCTGCACAAGAGAATGCCAAATCAAGAGAGACCTCAATGTCATACTCTTGTAGTCTTTGTAGCAAAGCTTACAGGAGTGCTCAGGCTCATGCCCAACATCTTAAATCTAGGAGTCACATCATCCGCGCTTCGCAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCCCTTCCTCAACGAATTTCTAATAAGGTACCTCAACAAAATGAGGAGGAAGAGAGTGAGGAGGAGTGGGAAGAAGTCGATCCTGATGAAGACATGATTGACGAGGATGAGGGTGAGAATGATGATTCTGATGCCATTGAGGTGGACTTGGATCCATCATGCTGCTTCATGTGTGATCTAGAGCATGATACCATTGATAGCTGCATGGTCCACATGCATAAGCAACATGGATTCTTTATTCCTGATGTCGAATATTTGAAGGATCCAAAAGGCTTCCTTACATACCTAGGCCTGAAGGTGACGAGGGATTTCAGGTGTCTGTACTGCAACGATAACTGTCTTCCATTTGGCAGCTTGGAAGCAGTTAGGAAGCACATGGAAGCGAAAAGCCATTGCAAAGTGCATTATGGTGATGGAGACGAGAATGAAGAAGTAGAATTGGAAGAATTTTATGATTACAGTAGCAGTTATGTGGATGGAAGTGGCAACCAGCTAGTAGCATCAGGGGATGGGGACAATTCTGTTGAACTTGGTAGTGGTGGAGCCGAGCTCATCTTAGTTCAAAGAGCTAGCGAACGGCAAACGACCAAAACACTTGGTTCCAGGCAATTTCTACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATTCAGCCATAACTGCTGCATTGGCAGCAAGGTACAGGAGCATGGGATTGGCGACTGTACAATCAAGAGAAAGGATGATCAAGATGAAAGTGATGAAAGAAATCAATCGAACCGGGTTGGAGGCCATGCGTACCAAAATCGGATTGAAGAACAACGTAATTCGAAACCTGCCTAAGAATGTTCCATTCTAG 1182 44.16 MPGLTCNACNKEFLDADEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENAKSRETSMSYSCSLCSKAYRSAQAHAQHLKSRSHIIRASQGTHDQEVEKPIIKPLPQRISNKVPQQNEEEESEEEWEEVDPDEDMIDEDEGENDDSDAIEVDLDPSCCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPKGFLTYLGLKVTRDFRCLYCNDNCLPFGSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGDNSVELGSGGAELILVQRASERQTTKTLGSRQFLRYYRQKPRPSPANDSAITAALAARYRSMGLATVQSRERMIKMKVMKEINRTGLEAMRTKIGLKNNVIRNLPKNVPF 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5037275 5040542 - Lag0037307.1 Lac2g0669 597933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0669 393 SMART c2h2final6 69 93 IPR013087 -
Lac2g0669 393 SMART c2h2final6 4 28 IPR013087 -
Lac2g0669 393 SMART c2h2final6 165 188 IPR013087 -
Lac2g0669 393 SMART c2h2final6 216 243 IPR013087 -
Lac2g0669 393 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Lac2g0669 393 SMART ZnF_U1_5 66 100 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Lac2g0669 393 ProSitePatterns Zinc finger C2H2 type domain signature. 71 93 IPR013087 -
Lac2g0669 393 MobiDBLite consensus disorder prediction 127 156 - -
Lac2g0669 393 Pfam C2H2 type zinc-finger (2 copies) 167 269 IPR041661 -
Lac2g0669 393 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Lac2g0669 393 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
Lac2g0669 393 MobiDBLite consensus disorder prediction 115 156 - -
Lac2g0669 393 SUPERFAMILY beta-beta-alpha zinc fingers 151 203 IPR036236 -
Lac2g0669 393 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 93 IPR013087 -
Lac2g0669 393 PANTHER ZINC FINGER PROTEIN 622 1 391 IPR040025 GO:0030687(PANTHER)|GO:0042273(PANTHER)
Lac2g0669 393 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0669 K14816 - csv:101219700 701.049