Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g0678 | ATGGCGAACGCTATCACTCTCCAAGATATTCGAAACGAGTCTGTCGACCTGGAACGTCTTCCAATCGGCGAAGTGTTCCAGAAGTTAAAATGCTCAAAACAAGGTCTCAGTTCAGAGGAAGGAGCCAGTCGGCTCCAAGTTTTCGGACCGAACAAACTCGAAGAGAAAAAGGAAAGCAAAATTCTGAAATTTCTGGGGTTTATGTGGAATCCCCTCTCTTGGGTCATGGAAGCAGCGGCTATAATGGCTATTGTCTTGGCGAACGGAAGTGGAAGGTCTCCGGACTGGCAGGATTTTGTGGGAGTCATTGCCCTGCTTTTGATCAACTCAACCATCAGTTTTTTTGAAGAAAACAACGCAGGAAATGCAGCTGCAGCCCTTATGGCCGGCCTTGCTCCCAAAACTAAGGTTCTCAGAGATGGTCGTTGGAGTGAGCAAGATGCTGCTATTCTGGTTCCTGGAGATATAATAAGTATCAAACTGGGAGACATAATCCCTGCTGATGCTCGTCTTCTTCAGGGGGATCCTTTGAAGATTGATCAGTCTGCTTTAACTGGCGAGTCCCTCCCTGTTACCAAAAACCCTTCAGATGAAGTATTTTCGGGATCAACGTGTAAACAGGGAGAAATTGAAGCAGTAGTGATTGCCACTGGCGTGCACACCTTCTTTGGCAAAGCTGCTCATTTAGTGGACAGCACCAATCAAGTTGGGCATTTCCAAAAAGTTCTTACTGCCATTGGGAATTTCTGTATTTGCTCCATTGCTATTGGAATTATTTTGGAGATCATAGTCATGTACCCAATACAACATCGTGCGTATAGGGATGGCATCGACAATTTGCTGGTGCTTTTGATTGGAGGAATTCCTATTGCCATGCCTACTGTTTTGTCTGTCACCATGGCCATTGGTTCCCACCGACTTTCTAAGCAAGGTGCTATTACCAAGCGAATGACTGCCATTGAGGAGATGGCTGGCATGGATGTCCTCTGCAGTGACAAGACTGGAACATTAACCTTGAATAAGCTCACTGTTGACACTTCCTTGACTGAAGTCTTTGTGGGGGGTATGGATAAAGAACATGTCATCCTTCTGGCAGCAAGAGCTTCTAGAACAGAAAATCAGGATGCCATTGATACTGCTATTGTTGGAATGTTAGCAGATCCAAAAGAGGCACGAGCTGGTATTACAGAGGTTCATTTTTTTCCATTCAACCCTGTGGATAAGAGAACTGCTCTGACTTATATTGATTCTGATGATAATTGGCACCGAGTTAGTAAAGGTGCTCCAGAGCAGATCTTAAATATTTGCAATTCCAGCGAAGTCGTCAGGAGACAAGTTCATGGAGTGATTGATAAGTTTGCTGAATGTGGATTGCGATCCCTAGGTGTTGCTAGACAGGAAGTACCTGAGAAAACCAAAGAAAGTCCAGGAGAACCATGGCAACTTGTTGGATTGTTAGCTCTGTTTGATCCTCCCAGGCTTGATAGTGCAGAAACCATCAGCAGGGCTCTGAACCTTGGAGTAAATGTCAAGATGATCACTGGTGACCAACTGGCCATTGCCAAGGAAACCGGTCGGAGACTTGACGAGTTGATTGAAACGGCTGATGGATTTGCTGGTGTATTTCCAGAACATAAATATGAAATTGTGAGAAAGTTACAAGAGAAGAAACACATTTGTGGAATGACTGGTGATGGTGTAAATGACGCCCCTGCACTAAAGAGGGCGGATATTGGAATAGCTGTTGCTGATGCAACCGATGCAGCTAGAGGCGCTTCTGACATCGTCCTCACTGAACCCGGATTGAGCGTCATTATCAGTGCAGTATTGACCAGCAGGGCTATCTTCCAGAGGATGAAGAACTATACGATTTATGCAGTTTCCATCACCATTCGTATAGTGTGGATTAGAAATTCAAGTTTTTTGTTATACTGTATACCAGGAACAATCATGACCATTTCGAAGGATCGAGTTAAGCCTTCTCCACAGCCCGACAGTTGGAAGTTGAAGGAAATTTTCGCCACTGGCATTGTGTTAGGAGGTTACTTGGCACTGATGACAGTTCTATTCTTCTGGCTCGCGAGAGACACCGACTTTTTCTCGAACATGTTTCATGTAGAATCCCTAAGGACCAACGACCCAAAAATGATGTCAGCATTGTATCTACAAGTTAGTATCGTGAGTCAGGCCCTTATTTTTGTCACCAGGTCTCGAAGTTGGTCCTTTGCCGAACGTCCTGGACTTCTCTTAGTGGGCGCCTTCATAATCGCCCAGTTGGTTGCAACTCTAATAGCAGTGTATCCAGAATGGCATTTTGCAAGGATAAATGGCATTGGCTGGGGGTGGGCTGGGGTGATCTGGCTATATAGTTTGATAACTTACATCCCTCTTGATATTCTCAAATTTACCATCCGCTACGCTCTCAGTGGAAGAGCTTGGAACAATCTTCTACAGAATAAGGCTGCTTTCACAACAAAGAAAGATTATGGCAAAGAAGAGAGGGAAGCACAATGGGCTACCACACAAAGGACCATTCATGGTCTTCAACGACCTCAATCTAGCAACGCTCTTTCTGATAGGAATAGTTGCGGGGAGCTTTCCGAAATCGCCGAGCAAGCCAGGCGACGAGCTGAAATTGCGAAGTTCCGGGAGCTTGCTGTAAAACAGAACCATGTCGACAAGATAGTTAAAGAGAACGATTCATCAGGTCACAACCATGAAGCGAAAGGGCTGGCTTTGGAGGAGTGA | 2748 | 45.2 | MANAITLQDIRNESVDLERLPIGEVFQKLKCSKQGLSSEEGASRLQVFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIVLANGSGRSPDWQDFVGVIALLLINSTISFFEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLQGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGIILEIIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSKQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDTSLTEVFVGGMDKEHVILLAARASRTENQDAIDTAIVGMLADPKEARAGITEVHFFPFNPVDKRTALTYIDSDDNWHRVSKGAPEQILNICNSSEVVRRQVHGVIDKFAECGLRSLGVARQEVPEKTKESPGEPWQLVGLLALFDPPRLDSAETISRALNLGVNVKMITGDQLAIAKETGRRLDELIETADGFAGVFPEHKYEIVRKLQEKKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVWIRNSSFLLYCIPGTIMTISKDRVKPSPQPDSWKLKEIFATGIVLGGYLALMTVLFFWLARDTDFFSNMFHVESLRTNDPKMMSALYLQVSIVSQALIFVTRSRSWSFAERPGLLLVGAFIIAQLVATLIAVYPEWHFARINGIGWGWAGVIWLYSLITYIPLDILKFTIRYALSGRAWNNLLQNKAAFTTKKDYGKEEREAQWATTQRTIHGLQRPQSSNALSDRNSCGELSEIAEQARRRAEIAKFRELAVKQNHVDKIVKENDSSGHNHEAKGLALEE | 915 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5076289 | 5082688 | + | Lag0037316.1 | Lac2g0678 | 597942 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g0678 | 915 | Gene3D | - | 95 | 776 | - | - | |
Lac2g0678 | 915 | Pfam | E1-E2 ATPase | 132 | 310 | - | - | |
Lac2g0678 | 915 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 16 | 808 | IPR023298 | - | |
Lac2g0678 | 915 | Gene3D | - | 862 | 900 | - | - | |
Lac2g0678 | 915 | CDD | P-type_ATPase_H | 35 | 802 | IPR006534 | GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro) | |
Lac2g0678 | 915 | SFLD | C1.7: P-type atpase like | 312 | 614 | - | - | |
Lac2g0678 | 915 | PRINTS | P-type cation-transporting ATPase superfamily signature | 484 | 495 | - | - | |
Lac2g0678 | 915 | PRINTS | P-type cation-transporting ATPase superfamily signature | 330 | 344 | - | - | |
Lac2g0678 | 915 | PRINTS | P-type cation-transporting ATPase superfamily signature | 563 | 582 | - | - | |
Lac2g0678 | 915 | PRINTS | P-type cation-transporting ATPase superfamily signature | 180 | 194 | - | - | |
Lac2g0678 | 915 | PRINTS | P-type cation-transporting ATPase superfamily signature | 586 | 598 | - | - | |
Lac2g0678 | 915 | PRINTS | P-type cation-transporting ATPase superfamily signature | 506 | 516 | - | - | |
Lac2g0678 | 915 | SMART | Cation_ATPase_N_a_2 | 16 | 88 | IPR004014 | - | |
Lac2g0678 | 915 | Pfam | Cation transporter/ATPase, N-terminus | 19 | 82 | IPR004014 | - | |
Lac2g0678 | 915 | Gene3D | - | 327 | 600 | IPR023214 | - | |
Lac2g0678 | 915 | SFLD | p-type atpase | 312 | 614 | IPR044492 | - | |
Lac2g0678 | 915 | NCBIfam | plasma-membrane proton-efflux P-type ATPase | 35 | 529 | IPR006534 | GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro) | |
Lac2g0678 | 915 | NCBIfam | HAD-IC family P-type ATPase | 397 | 637 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac2g0678 | 915 | NCBIfam | HAD-IC family P-type ATPase | 103 | 346 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac2g0678 | 915 | SUPERFAMILY | Calcium ATPase, transduction domain A | 133 | 230 | IPR008250 | - | |
Lac2g0678 | 915 | FunFam | Plasma membrane ATPase | 133 | 217 | - | - | |
Lac2g0678 | 915 | SUPERFAMILY | HAD-like | 326 | 610 | IPR036412 | - | |
Lac2g0678 | 915 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 19 | 836 | - | GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER) | |
Lac2g0678 | 915 | Gene3D | - | 133 | 217 | - | - | |
Lac2g0678 | 915 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 332 | 338 | IPR018303 | - | |
Lac2g0678 | 915 | FunFam | Plasma membrane ATPase | 342 | 489 | - | - | |
Lac2g0678 | 915 | MobiDBLite | consensus disorder prediction | 894 | 915 | - | - | |
Lac2g0678 | 915 | Gene3D | - | 342 | 489 | IPR023299 | GO:0000166(InterPro) | |
Lac2g0678 | 915 | Pfam | haloacid dehalogenase-like hydrolase | 326 | 577 | - | - | |
Lac2g0678 | 915 | FunFam | Plasma membrane ATPase | 527 | 611 | - | - | |
Lac2g0678 | 915 | PRINTS | H+-transporting ATPase (proton pump) signature | 721 | 742 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac2g0678 | 915 | PRINTS | H+-transporting ATPase (proton pump) signature | 594 | 619 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac2g0678 | 915 | PRINTS | H+-transporting ATPase (proton pump) signature | 446 | 464 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g0678 | Lac-Chr2:5076289 | Lac6g2308 | Lac-Chr6:40409927 | 0.00E+00 | dispersed | |
Lac2g0677 | Lac-Chr2:5064718 | Lac2g0678 | Lac-Chr2:5076289 | 1.90E-11 | tandem | |
Lac2g0678 | Lac-Chr2:5076289 | Lac6g1186 | Lac-Chr6:11288308 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac2g0678 | K01535 | - | csv:101219224 | 1494.18 |