Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0692 ATGGAGTTGAAGAAAGGGAAGTTCGTGAGGTTTTACTCCAATGAGAAGCAGAATCTCGAGCTTCCATGGGAGAAAACCGATGCTAAAAGGCGCATTGAGTTTCCATTACCAGTTTTCAAAATGGGTACTGCTCCATTATCGAAATTAGACAATGGGGTTGGGGATAAAAGTAAAATTAGCTCAGATTTAGGGAGGTCGAAGATTTTTGTGGAGAATAATGGGGCACAACAGAAGAGGATTCTTAACCCTGAAAGTGAAACGATTCTGAGATGGAACAGAGTTTTTCTCTTCTCTTGTTTGACAGCTCTTTTCGTTGACCCTCTTTTCTTCTACCTTCCTTCTGTGATTCACCATGGCAGGTCTTCTTGTATGACTACTGATTTCAATTTAGGAATTGTTGTGACTGTTTTTCGCACTTTTGCCGATGTGTTCTATCTGTTGCATATGGTTTTGAAGTTCCGGATGGCTTATGTTTCACCCACTTCAAGAGTTTTTGGCAAAGGGGAACTAGTCACTGATCCAAAGAAGATTGCTAAACGTTACTTGAAGTCTGATTTCTTTATAGATCTCATTGCTTCTCTGCCTCTTCCTCAGATTATGATATGGTTTATAATGCCAGCAATTAGAAGCTCTCATGCAGACCATACAAACAATACTTTGGTGTTAGTAGTCCTGCTTCAGTATATTCCAAGATTTTACCTGATCTTCCCATTGAGTTCCCACATTATCAAAACTACTGGTGTTGTCACAAAGACTGCTTGGGCAGGGGCTGCATATAACCTTGTATTGTATATGCTAGCTAGTCATATCTTAGGAGCAGCATGGTATTTACTGTCTGTGGAGCGCCATGCCATGTGCTGGAAGTTCACCTGCAGGAGAGAATTCAGTCCTATGAAATGCCTTCTTGACTATCTGGATTGTGGTACTTTAGATTATGTAGACCGCAGGATATGGGAAGTAAATACTACTGTATTTAGCCAATGTTCTCCGGACGTAGATGTCGTTTTCAATTACGGGATATTTGCCGATGCGATCACGAAAAACGTCATCTCCTCCGGGTTCGTTCAGAAGTATTTCTACTGTCTATGGTGGGGCTTACAGAACTTGAGTTCCTATGGTCAGGGTTTGGAGACAACAACCTTCATAGGAGAGACTTTATTTGCTATCCTCATTGCTATAATGGGTTTGGTCCTGTTTGCGCATTTGATCGGAAATATGCAGACTTATTTGCAATCCATCACTGTGAGACTGGAAGAGTGGAGGGTCAAGCGTCGAGACACTGAGGAATGGATGAAACATCGACAGCTCCCTCAAGATTTACAAGAACGTGTGAGGAGATTTGTTCAATATAAGTGGCTTGCAACACGAGGAGTCGACGAAGAGTCGATCTTACAAGGCCTTCCAACAGATCTTCGTCGAGATATTCAGCGTCATCTGTGCCTCGACCTTGTTCGACGTGTTCCTTTTTTCGCTCAGATGGATGATCAACTACTTGACGCGATCTGCGAGCGATTGGCATCGTCCTTATGTACACAAGGTACTTACATTGTTCGCGAGGGAGATCCTGTTACCGAGATGCTCTTTATCATCCGAGGGATGCTTGAGAGTTCAACAACAGATGGAGGACGGTCGGGTTTCTTCAATTCGATAACCTTAAGACCGGGAGATTTTTGTGGGGAAGAGCTTCTCGCTTGGGCATTGCTTCCAAAATCTTCAATCAGCTTGCCATCTTCCACTAGAACAGTTAGAGCAATCACTGAAGTTGAAGCCTTTGCTCTGCGAGCAGAGGATCTCAAATTCGTCGCTAACCAGTTTCGACGTCTCCATAGCAAGAAGCTTCAACACACCTTCCGGTTTTACTCCTATCATTGGAGAACCTGGGCAGCTTGCTTCATTCAAGCAGCATGGCGTCGCTTCAAAAGGAGAATCATAGCAAAGTCGCTCAGTATGCAGGAGTCTTTCTCACTGACTCCTGAGAAGCCAGCGGCTGAAGAAGCTGAACAAGAAGAGGAAGAACATAACACTCCGCGCTCCAATTACTCTCAAGCAAAACAAAACCTCGGCGTCACGATATTGGCTTCAAGGTTTGCTGCAAACACACGTCGAGGAGCACAGAAGCTTAAGGATGTCAATTTATCGAAGCTTCGAAAGCCTGATGAGCCAGACTTTTCAGAAGAACCAGATGATTAA 2190 43.74 MELKKGKFVRFYSNEKQNLELPWEKTDAKRRIEFPLPVFKMGTAPLSKLDNGVGDKSKISSDLGRSKIFVENNGAQQKRILNPESETILRWNRVFLFSCLTALFVDPLFFYLPSVIHHGRSSCMTTDFNLGIVVTVFRTFADVFYLLHMVLKFRMAYVSPTSRVFGKGELVTDPKKIAKRYLKSDFFIDLIASLPLPQIMIWFIMPAIRSSHADHTNNTLVLVVLLQYIPRFYLIFPLSSHIIKTTGVVTKTAWAGAAYNLVLYMLASHILGAAWYLLSVERHAMCWKFTCRREFSPMKCLLDYLDCGTLDYVDRRIWEVNTTVFSQCSPDVDVVFNYGIFADAITKNVISSGFVQKYFYCLWWGLQNLSSYGQGLETTTFIGETLFAILIAIMGLVLFAHLIGNMQTYLQSITVRLEEWRVKRRDTEEWMKHRQLPQDLQERVRRFVQYKWLATRGVDEESILQGLPTDLRRDIQRHLCLDLVRRVPFFAQMDDQLLDAICERLASSLCTQGTYIVREGDPVTEMLFIIRGMLESSTTDGGRSGFFNSITLRPGDFCGEELLAWALLPKSSISLPSSTRTVRAITEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRFKRRIIAKSLSMQESFSLTPEKPAAEEAEQEEEEHNTPRSNYSQAKQNLGVTILASRFAANTRRGAQKLKDVNLSKLRKPDEPDFSEEPDD 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5204642 5208749 + Lag0037330.1 Lac2g0692 597956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0692 729 ProSiteProfiles cAMP/cGMP binding motif profile. 489 619 IPR000595 -
Lac2g0692 729 SMART cnmp_10 489 620 IPR000595 -
Lac2g0692 729 FunFam Cyclic nucleotide-gated ion channel 1 487 605 - -
Lac2g0692 729 FunFam Cyclic nucleotide-gated ion channel 1 416 480 - -
Lac2g0692 729 SUPERFAMILY Voltage-gated potassium channels 87 411 - -
Lac2g0692 729 Gene3D Jelly Rolls 487 607 IPR014710 -
Lac2g0692 729 MobiDBLite consensus disorder prediction 707 729 - -
Lac2g0692 729 SUPERFAMILY cAMP-binding domain-like 419 611 IPR018490 -
Lac2g0692 729 Gene3D Helix hairpin bin 417 480 - -
Lac2g0692 729 Pfam Cyclic nucleotide-binding domain 512 601 IPR000595 -
Lac2g0692 729 CDD CAP_ED 489 620 IPR000595 -
Lac2g0692 729 MobiDBLite consensus disorder prediction 707 722 - -
Lac2g0692 729 Pfam Ion transport protein 91 416 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Lac2g0692 729 Gene3D - 108 415 - -
Lac2g0692 729 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 706 - -
Lac2g0692 729 MobiDBLite consensus disorder prediction 655 683 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2137 Lac-Chr1:42805249 Lac2g0692 Lac-Chr2:5204642 7.00E-188 dispersed
Lac2g0692 Lac-Chr2:5204642 Lac3g0268 Lac-Chr3:1908412 5.80E-276 dispersed
Lac2g0692 Lac-Chr2:5204642 Lac9g2595 Lac-Chr9:44480023 3.10E-213 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0692 K05391 - csv:101211072 1240.33