Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0696 ATGGACCAAGGAGGCAAAACCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGGTTTTTGGCCCGACCCCTGCTCGGCCTCGGCCCATGGCCGAGGCCGACCTCGGCCCGCTCGTGCGGGCCGAGTCTGTTCGATGACGTTAGGCCCCTACCCCTCTGTCAGCCCCGGTTTTGCCTGCATCGGAGCCGGTGCGGCGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTCCTCTGGCCAAAATCGACCATCAACAGTGGCAATTGACAAAGACAAAGGCAGCCAAGGAGCTCTCAAATGGGCAGTTGATCATTTGCTTCAAAGAGGCCAAACTATCTTCCTCATTCATGTCAAACTCAAATCTCCTTCTAATTCTTCTCAAAAGATGAGTTTGAAATCTGACCCTGAAGCTGGCGTCAAAGAATTATTCCTTCCTTTTCGTTGCTTTTGTACCCGAAAGGATATTCATTGCAAAGATGTTGTGTTGGAAGATACAGATGTAGCCAAGGCTTTAATCGAGTATGCTGCAAATACAGCCATAGAGAACATTGTTGTGGGAGCTTCAGCCAAAAATGGCTTCTTAAGATTCAAGGCAACTGATGTTCCTGCCAGTGTAGTAAAAGGAGCACCAGATTTTTGCAATGTGTTTGTCATTTCTAAAGGGAAAATCCAATCGATGCGTTCGGCATCTCGTCCTGCTCCCGTCGCGAATGCTCTACGAGGTCAATTAGCGCAACAAGCCACCGCAAAATCCGATACACCCGACTACCATGTCCCTCACTCTGCAAGTGCAAGAGTATCTTTGGATAAGCCACCCATTGATTTGCCATCCAAACCGCAGGACGAGCTCGAGGTCATGAGGTCACCATTCACAAGGAAAGGATATAATTACAAAGCATCGTATGGAGATTTGTGTATGCAAGATTCGGATATATCGTATGTAAGCTCGGGAAGGCCGAGTATCGATCGTATATTTCCTTCACCTTATGACAACCAAGATATGGGAGGAAGAGCCACCCCACCACAGATGTCAAGCAGCACAGATATTGACTTGAATCGCAGCTTCGAGTCTCTGCAGCTCGGACGGATGTCGGTCGATATGAGCTTCCCTTCCGAGTTCTCATCCATCTCGCAAGACAGTGGTGACAGATTATCAATTTCATCACAGTCTATGGAAGACGTAGAGGCGGAGATGCGGAGGCTGAAGCTAGAACTGAAGCAAACCATGGAAATGTATAGTACAGCTTGCAAGGAAGCACTGACAGCAAAACAAAAGGCGGTAGAGCTACAAAGGTGGAAATTAGAAGAAGAAAGGAGATTAGAGGAGGCGAGATTGGCAGGGGAAGCAGCATTGGCGCTAGCGGAACAGGAGAAGGCGAAGTCGAAAGTGGCGATTGAGGCTGCGGAAGCAGCAAGGAGAATAGCAGAACTGGAAGCACAGAAAAGAATGAAGGCTGAAATGAAAGCACTCAAAGAAGCTGAAGAGAAGAAAAAGGCAGTTGATGCATTGGCTCAAAACGATATCAGGTATAGAAGGTATACGATCGAGGAGATCGAAGAGGCAACCGAGTTCTTTTCGGAAGCTCGCAGGATCGGAGAAGGAGGTTATGGTCCTGTATACAAGTGTGATCTTGATCATACTCCTGTTGCCATTAAGGTTCTACGTCCCGACGCGACTCAAGGACGATCGCAGTTTAAACAAGAGGTAGAAGTACTCAGTTGTATACGCCATCCGAACATGGTTCTCCTCCTCGGAGCTTGCCCCGAGTACGGCTGCTTGGTCTATGAGTTCATGGCTAATGGGAGCTTAGAAGACCGACTTCTCCGACGAGGAAACACGCCTCCACTTTCGTGGCAAATCAGGTTTAAAATTGCAGCTGAAATTGGAACTGCATTGTTGTTCCTACACCAAACAAAGCCAGAGCCTCTTGTGCACCGCGATCTCAAACCGGCTAACATTCTGCTTGACCGTAACTTTGTCAGCAAGATCAGCGATGTCGGCTTGGCTAGGCTTGTACCTCCATCGGTTGCCGATAGCGTAACACAATATCGAATGACATCGACTGCTGGAACGTTTTGCTACATTGATCCAGAGTATCAGCAGACAGGTATGCTTGGTGTCAAATCCGACATATACTCACTAGGCATCATGTTTCTCCAACTCATAACCTCCAGGCCACCAATGGGATTGACTCACCACGTCGAAAGAGCTATCGAGAAGGGCACGTTCGCAAGTATTCTCGATCCAGCCGTCCCCGATTGGCCTATCGAAGAAGCTTTGTCTTTCGCCAAGTTGTCGCTCAAGTGTGCCGAGTTAAGACGTAAAGATAGGCCTGATCTTGGGAAGGCCATCCTGCCAGAGCTCAACAGGTTGAGAACTATTGCAGAAGACACAATGCACCCCACAATAATGGGAGACATAAGCCCCTCTCGCAGCAGCAGCCAAGTTTCTCTACAGTTGGGAGCAATGGGTTCATCCCCGCAATCATACAACAGCTCGAAAAATCCATCTGCTACTCTTTGA 2589 48.98 MDQGGKTGKWDGPRPKGSGFWPDPCSASAHGRGRPRPARAGRVCSMTLGPYPSVSPGFACIGAGAASTTPVCRFTVLQATSSPSSTNLPLVAREGQVSSSGQNRPSTVAIDKDKGSQGALKWAVDHLLQRGQTIFLIHVKLKSPSNSSQKMSLKSDPEAGVKELFLPFRCFCTRKDIHCKDVVLEDTDVAKALIEYAANTAIENIVVGASAKNGFLRFKATDVPASVVKGAPDFCNVFVISKGKIQSMRSASRPAPVANALRGQLAQQATAKSDTPDYHVPHSASARVSLDKPPIDLPSKPQDELEVMRSPFTRKGYNYKASYGDLCMQDSDISYVSSGRPSIDRIFPSPYDNQDMGGRATPPQMSSSTDIDLNRSFESLQLGRMSVDMSFPSEFSSISQDSGDRLSISSQSMEDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEERRLEEARLAGEAALALAEQEKAKSKVAIEAAEAARRIAELEAQKRMKAEMKALKEAEEKKKAVDALAQNDIRYRRYTIEEIEEATEFFSEARRIGEGGYGPVYKCDLDHTPVAIKVLRPDATQGRSQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLLRRGNTPPLSWQIRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITSRPPMGLTHHVERAIEKGTFASILDPAVPDWPIEEALSFAKLSLKCAELRRKDRPDLGKAILPELNRLRTIAEDTMHPTIMGDISPSRSSSQVSLQLGAMGSSPQSYNSSKNPSATL 862
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5260915 5266951 - Lag0037334.1 Lac2g0696 597960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0696 862 CDD STK_N 108 243 - -
Lac2g0696 862 MobiDBLite consensus disorder prediction 270 301 - -
Lac2g0696 862 Pfam Universal stress protein family 108 232 IPR006016 -
Lac2g0696 862 MobiDBLite consensus disorder prediction 824 862 - -
Lac2g0696 862 SUPERFAMILY Protein kinase-like (PK-like) 530 804 IPR011009 -
Lac2g0696 862 Coils Coil 406 433 - -
Lac2g0696 862 PANTHER OS02G0152300 PROTEIN 107 857 IPR051348 -
Lac2g0696 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g0696 862 Gene3D HUPs 90 240 IPR014729 -
Lac2g0696 862 Gene3D Transferase(Phosphotransferase) domain 1 620 825 - -
Lac2g0696 862 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 108 240 - -
Lac2g0696 862 MobiDBLite consensus disorder prediction 1 38 - -
Lac2g0696 862 FunFam U-box domain-containing protein 51 620 820 - -
Lac2g0696 862 Gene3D Phosphorylase Kinase; domain 1 524 619 - -
Lac2g0696 862 Coils Coil 439 459 - -
Lac2g0696 862 Pfam Protein kinase domain 548 801 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0696 862 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 519 619 - -
Lac2g0696 862 Coils Coil 473 525 - -
Lac2g0696 862 MobiDBLite consensus disorder prediction 350 370 - -
Lac2g0696 862 ProSiteProfiles Protein kinase domain profile. 547 825 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0696 862 SMART serkin_6 547 810 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0696 862 MobiDBLite consensus disorder prediction 827 862 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g1756 Lac-Chr11:31848139 Lac2g0696 Lac-Chr2:5260915 4.90E-106 dispersed
Lac2g0696 Lac-Chr2:5260915 Lac6g2191 Lac-Chr6:38373645 1.20E-219 dispersed
Lac4g1364 Lac-Chr4:31871266 Lac2g0696 Lac-Chr2:5260915 2.80E-229 transposed
Lac2g0696 Lac-Chr2:5260915 Lac6g1163 Lac-Chr6:11055113 3.90E-287 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85990 PF00069 Pkinase 3.90E-39 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0696 - - - 0.0