Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g0706 | ATGGATTCAAAGAAGTCCAACAAAATCCGAGACATCGTCAGGCTTCAACAGATCCTGAAGAAGTGGCGAAAGCTAGCGAACTCATCGAAGACGGCGAACAAGCTCTCCGGCACGGCGGCGGGACCGGCCGGAAAGAGCATAAAGTTTCTGAAGCGGACTCTGTCGGCCGGGCGGGAGAGCTCCGGCGGCGGCGGCGTGCCGAAAGGCTATTTGGCGGTGAGCGTCGGCGAGGAGCAGAAGCGATTCGTGATTCCGACGCAGTACCTAGGGCATCCGGCGTTTGAGATTCTGCTGAGAGAGGCGGAGGAGGAGTTTGGATTTCAACAGACGGGAGTGTTGAGGCTGCCGTGCGAAGTGGCGGTGTTTGAAAATGTGGTGAAATTGGTGGAGAAGAAGGGGGATTTGGATTTGCTTGGAGGAGATGAGGTTTTGGGGTTTTGTTCGTTGGAATCGCTGCAGCTTACGCCGTCGCACCGGCCGCAGAGTCCAATGTGCAGATAG | 501 | 56.49 | MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANKLSGTAAGPAGKSIKFLKRTLSAGRESSGGGGVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVAVFENVVKLVEKKGDLDLLGGDEVLGFCSLESLQLTPSHRPQSPMCR | 166 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 5373902 | 5374402 | - | Lag0037344.1 | Lac2g0706 | 597970 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g0706 | 166 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 15 | 128 | IPR003676 | GO:0009733(InterPro) | |
| Lac2g0706 | 166 | Pfam | Auxin responsive protein | 14 | 128 | IPR003676 | GO:0009733(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g0706 | Lac-Chr2:5373902 | Lac4g3103 | Lac-Chr4:49182845 | 5.80E-38 | dispersed | |
| Lac2g0706 | Lac-Chr2:5373902 | Lac2g0160 | Lac-Chr2:1211128 | 1.30E-16 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac2g0706 | K14488 | - | csv:101216710 | 260.766 |