Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0777 ATGTTCCCAAAGCCCCACCACCAACCACCGCCCCATTCTCAATCTTTTCCCCGCTCCTTTTCCGTCGCCGCCACTCCGCCGCCGCGCGATTCAACCGCCGCTGCCGATGACGATTCCACCGCCGGCCCCTCGCCTCTCACTCACGCTATGCTCCCCAAAGAACCGGCCTCCGGAGGCGACGGAGCTTCCATCGAGGTCGTCCGCCGCCCCCGCGGCCGCCCGCCGGGATCGAAGAACAAGCCGAAGCCAACCGCCCTGGTCGTCGCCGCACGGGACTCCGAGCCGGCGATGAGTCCTTATGTGCTCGAAGTTCCCGGCGGTAGCGATGTCGTTGAGGCTATTTCCCGATTTTGCCGCCGCAGAAACACAGGACTATGTATTCTCAACGCTTACGGAACCGTCGCTGATGTCACTCTCCGGCAGCCGTCTTCATCTCCGGTGGCGACCGTCACTTTCCATGGACGATTCGATATTCTCTCGGTCTGCGCCACTTTTGTTCCTCATACGACGTCGTTTCCCGTTCCTAACGGATTCACCATCACGCTAGCGGGGCCGCAGGGCCAGATCTTCGGCGGCTTGGTCGCCGGAGCTTTAATCGGCGCCGGAACCGTCTACGTAATAGCCGCCTCATTCAACAATCCGTCGTATCAGCGTCTGCCTTCGGAAGACGAAGTCAGAAAATTAGCCTTCAGCGACGTCGAAGAAGGCCACTCTCCGCCGATCTCCGGCGGCAAAGACAGCGAAAACACCGCCGCCGCCGCCGATACCTGCGGCCTGCTGCCTATGTACAGCACTCACTCGTCCTCCGATGTAATTTGGACTCCCGCCGCTAGACAACCGCCGCCGCCGCACCACCGCCAGTACTAA 867 61.48 MFPKPHHQPPPHSQSFPRSFSVAATPPPRDSTAAADDDSTAGPSPLTHAMLPKEPASGGDGASIEVVRRPRGRPPGSKNKPKPTALVVAARDSEPAMSPYVLEVPGGSDVVEAISRFCRRRNTGLCILNAYGTVADVTLRQPSSSPVATVTFHGRFDILSVCATFVPHTTSFPVPNGFTITLAGPQGQIFGGLVAGALIGAGTVYVIAASFNNPSYQRLPSEDEVRKLAFSDVEEGHSPPISGGKDSENTAAAADTCGLLPMYSTHSSSDVIWTPAARQPPPPHHRQY 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6018791 6019657 - Lag0037415.1 Lac2g0777 598041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0777 288 CDD DUF296 99 211 IPR005175 -
Lac2g0777 288 MobiDBLite consensus disorder prediction 1 85 - -
Lac2g0777 288 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 212 IPR005175 -
Lac2g0777 288 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 52 246 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Lac2g0777 288 Gene3D - 98 235 - -
Lac2g0777 288 ProSiteProfiles PPC domain profile profile. 94 234 IPR005175 -
Lac2g0777 288 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 223 - -
Lac2g0777 288 FunFam AT-hook motif nuclear-localized protein 98 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0777 Lac-Chr2:6018791 Lac6g2829 Lac-Chr6:45927148 1.10E-39 dispersed
Lac2g0777 Lac-Chr2:6018791 Lac6g1014 Lac-Chr6:9263173 5.10E-82 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0777 - - - 0.0