Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0871 ATGAGTGACAAGAGAGAGAATTCAACTGATGAAGGACTTGAAACAAAGGAGATGGACGAGGGAAGTTCGTCTTTAGATGATCAAGCCCATGATGACCGATATATTCACAAAGTTGGGGTTCCACCAAAGCAAAAACTCTACAAAGAAATCAAGTCTGCAGTGAAAGAAACATTTTTCCCTGATGATCCTCTGCGTTCATTCAAGGATCAAACAAAGAGGCGTAAATTTCTCCTCGGCATCCAGGCCGTTTTCCCAATACTTGAATGGGGAAGACATTACAATTTGACTAAGCTTAGAGGAGATGTTATTGCTGGATTTACTATTGCCAGTCTCTGCATTCCCCAGGATATTGGGTATGCAAAGCTTGCGAATTTGGCTCCAGAGTATGGATTGTACTCCAGCTTTGTTCCACCATTAATCTATGCACTTATGGGTAGCTCGAGAGATATAGCTATTGGTCCAGTTGCTGTTGTTTCTCTCTTGTTGGGGACGCTGCTTCAAGCGGAAATCGATTCCACTACGAATGCAGCAGAATACAGGCGGCTGGCGTTTACAGCTACATTCTTTGCAGGGATCACACAAGCCACCCTTGGAGTTCTGAGGTTGGGATTCCTAATTGACTTCTTGTCCCATGCTGCCATTGTTGGCTTCATGGGTGGAGCTGCCATCACCATTGCTCTCCAACAACTCAAAGGTTTTCTTGGCATAAAGAATTTCACAAAGAAAACAGATATTATCTCCGTTATGCAGTCGGTATTCGGCACAATACGACATGGATGGAACTGGCAGACAATAGTCATTGCTGCAACCTTCCTTTGCTTTCTTCTATTTGCAAAATTCATTGGGAAGAGGAACAAGAGGCTCTTCTGGGTGCCTGCAATTGCTCCACTCATATCCGTTGTGCTGTCTACCCTTTTGGTTTACCTCACTCGTGCAGATAAGCAAGGGGTTGCAATTGTGAAACACATAGAGAAAGGAATCAATCCCCCATCAGTGCAAGAATTATATTTCTCAGGCCAATACCTTCTAAAAGGGTTTAAGATCGGTGTCGTGGCGGGTATGGTAGCATTGACGGAAGCCGTTGCGATTGGAAGAACGTTCGCTTCAATGAAAGACTATCAAATTGATGGGAACAAGGAAATGGTAGCAATGGGAGTCATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTAGCAACAGGTTCATTCTCTCGATCCGCCGTAAATTACATGGCTGGCTGCCAAACTGCAGTCTCCAACATTGTGATGTCCGTTGTAGTACTCCTAACTCTGGCATTCATGACCCCACTTTTCAAATATACTCCAAATGCAATTCTGTCTGCTATCATAATATCCGCCGTGATCAACTTGATCGACTTGCACGCAGCGAAGTTGATATGGAAGATTGACAAATTTGATTTTGTTGCTTGTATGGGAGCCTTCTTCGGTGTCATCTTTTTCTCTGTTGAGATAGGCCTTCTAATTGCGGTATCCATTTCCTTCGCCAAAATCCTACTACAGGTTACCAGACCAAGGACTGCAATTCTTGGAAAGATCCCCAGGACGACCGTCTATCGAAACATACAGCAATATCCCGAAGCAACCAAAGTTTCCGGCGTTTTGATTGTGAGAGTTGATTCAGCAATTTACTTTTCCAACTCCAATTACATCAAGGAAAGGATATTGAGATGGCTGGTTGATGAGGAAGAGTTAACGAAAAAGTCATACCAGAACAAAATCCAGTTTCTAATAGTTGAAATGTCACCTGTTACTGACATAGACACGAGTGGCATACATGCTTTGGAAGAGTTACATGGGAGTCTGAAGAAAAGAGAAATTCAGCTCATTCTAGCAAATCCGGGGCCCGTGGTGATCGACAAGCTTCATGCATCGAAGTTTGTAGATTTGATAGGCCAAGACAATATCTTCCTCACAGTTGCAGATGCAGTCTCATCTTGTAATCCAAAGATAATGAACGACGTTTGA 1986 43.3 MSDKRENSTDEGLETKEMDEGSSSLDDQAHDDRYIHKVGVPPKQKLYKEIKSAVKETFFPDDPLRSFKDQTKRRKFLLGIQAVFPILEWGRHYNLTKLRGDVIAGFTIASLCIPQDIGYAKLANLAPEYGLYSSFVPPLIYALMGSSRDIAIGPVAVVSLLLGTLLQAEIDSTTNAAEYRRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKKTDIISVMQSVFGTIRHGWNWQTIVIAATFLCFLLFAKFIGKRNKRLFWVPAIAPLISVVLSTLLVYLTRADKQGVAIVKHIEKGINPPSVQELYFSGQYLLKGFKIGVVAGMVALTEAVAIGRTFASMKDYQIDGNKEMVAMGVMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSVVVLLTLAFMTPLFKYTPNAILSAIIISAVINLIDLHAAKLIWKIDKFDFVACMGAFFGVIFFSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATKVSGVLIVRVDSAIYFSNSNYIKERILRWLVDEEELTKKSYQNKIQFLIVEMSPVTDIDTSGIHALEELHGSLKKREIQLILANPGPVVIDKLHASKFVDLIGQDNIFLTVADAVSSCNPKIMNDV 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6864122 6867516 + Lag0037509.1 Lac2g0871 598135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0871 661 PANTHER SULFATE TRANSPORTER 54 653 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Lac2g0871 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Lac2g0871 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Lac2g0871 661 MobiDBLite consensus disorder prediction 1 33 - -
Lac2g0871 661 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Lac2g0871 661 Pfam Sulfate permease family 98 479 IPR011547 GO:0016020(InterPro)
Lac2g0871 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Lac2g0871 661 NCBIfam sulfate permease 85 649 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Lac2g0871 661 Coils Coil 566 586 - -
Lac2g0871 661 FunFam Sulfate transporter 31 510 656 - -
Lac2g0871 661 Pfam STAS domain 531 649 IPR002645 -
Lac2g0871 661 Gene3D STAS domain 510 656 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0871 Lac-Chr2:6864122 Lac4g2246 Lac-Chr4:42165358 2.20E-205 dispersed
Lac5g2005 Lac-Chr5:38503155 Lac2g0871 Lac-Chr2:6864122 6.20E-184 transposed
Lac8g2474 Lac-Chr8:42657755 Lac2g0871 Lac-Chr2:6864122 5.90E-108 transposed
Lac2g0871 Lac-Chr2:6864122 Lac8g1915 Lac-Chr8:37413485 1.20E-301 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0871 K17470 - csv:101207370 1163.29