Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0909 ATGGGAGCTGAAACTGGGCTTGCAATGTTTTGTGGAATGCTTCATAAAATAAAACCCTACTTGGCTATGATCTCCTTGCAATTTGGATATGCAGGGATGTATATTGTCACCATGCTTTGTCTTAAGAAGGGTATGAACCATTACGTTCTTGCCGTGTATCGACACGTCGTTGCCACCATTGTCATCTCCCCCTTCGCTCTCGTCCTCGAAAGGAAAATAAGGCCGAAGATGACATTCCCAATCCTTCTACGAATAATGCTCCTCGGCTTTCTCGAGCCTGTGCTGGATCAAAATCTATACTACGTGGGGTTGAAACTTACCTCAGCAACATTTACATCCGTCACCATCAATATTCTCCCTGCTGTAACTTTCATTATGGCTCTCATTTTCAGACTGGAAAGTGTGAACTTCAAGAAGATTCGTAGCATTGCAAAGGTGCTAGGAACATTGGTGACGATCGGCGGAGCAATGGTAATGACTCTATACAAAGGACCGATCGTCGACATCTTCCACGGCCACGGACGCCACGCCGCCCACCACAGCAGCAGCGAGTCCGCCGACCAGCACTGGGTCCTCGGCACCCTCATGCTCCTGGGCAGCATCGTCGGCTGGTCCGGCTTCTTCATCTTGCAATCATTTACATTAAGGAAGTACCCGGCGGAGTTGTCATTGACCGCCCTGATATGCTTGGCCGGCACGGTGGAGGGCTCCATTGTGACACTTATTATGGAGCGTGACTTTAGCGTGTGGGTCATCGGTTGGGACTCTCGTCTTCTTGCAGCTGTTTATACCGGTGTGATATGTTCTGGGCTTGCTTATTACATACAAGGCGTGGTGATTCGGCAACGTGGCCCAGTCTTTGTTACCTCTTTTACCCCTCTCTGCATGATTATTACAGCCATCCTTGGCTCCATTGTTTTGGCTGAGCAAATTCACCTTGGAAGCATAATCGGAGCCATCTTCATAGTGATGGGGCTATACTTGGTGGTGTGGGGCAAAGCCAAAGACCATCTAAACAAATTAACGAATCCAAAAGGCGGCGCCGCCACAGAATTACCGATCACCGCCGGCGCCACCGAGCCGGCAACCGGCGCCGCCGACGAGCGTTGCTCTACCAAGGCTCCACCGGCGTGA 1134 50.62 MGAETGLAMFCGMLHKIKPYLAMISLQFGYAGMYIVTMLCLKKGMNHYVLAVYRHVVATIVISPFALVLERKIRPKMTFPILLRIMLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLESVNFKKIRSIAKVLGTLVTIGGAMVMTLYKGPIVDIFHGHGRHAAHHSSSESADQHWVLGTLMLLGSIVGWSGFFILQSFTLRKYPAELSLTALICLAGTVEGSIVTLIMERDFSVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIRQRGPVFVTSFTPLCMIITAILGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHLNKLTNPKGGAATELPITAGATEPATGAADERCSTKAPPA 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7137708 7140980 + Lag0037547.1 Lac2g0909 598173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0909 377 PANTHER WAT1-RELATED PROTEIN 21 340 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac2g0909 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Lac2g0909 377 Pfam EamA-like transporter family 23 148 IPR000620 GO:0016020(InterPro)
Lac2g0909 377 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020(InterPro)
Lac2g0909 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g1845 Lac-Chr11:33164855 Lac2g0909 Lac-Chr2:7137708 9.60E-70 dispersed
Lac1g1566 Lac-Chr1:36941275 Lac2g0909 Lac-Chr2:7137708 3.40E-98 dispersed
Lac2g0178 Lac-Chr2:1356589 Lac2g0909 Lac-Chr2:7137708 8.90E-66 dispersed
Lac2g0909 Lac-Chr2:7137708 Lac8g1860 Lac-Chr8:36871754 1.70E-106 dispersed
Lac9g0307 Lac-Chr9:4849982 Lac2g0909 Lac-Chr2:7137708 2.60E-06 dispersed
Lac2g0909 Lac-Chr2:7137708 Lac8g1859 Lac-Chr8:36862403 3.00E-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0909 - - - 0.0