Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0915 ATGTGGTCGATCGGAGTGGATCGCATGGGTGCTGCTTATGGGACTGCAAAGAGTGGAGTTGGAGTGGCTTCCATGGGAGTTATGCGGCCAGAGCTTGTCATGAAATCTATAGTTCCTGTTGTTATGGCTGGAGTGTTGGGTATTTATGGGTTGATCATTGCTGTTATTATTAGTACCGGAATAAACCCGAAAGCAAAGTCTTACTATTTGTTTGATGGGTATGCACATCTATCTTCTGGACTTGCTTGTGGACTTGCTGGTCTCTCTGCTGGAATGGCAATCGGGATTGTTGGTGATGCTGGTGTTCGGGCCAATGCACAACAACCAAAGCTCTTCGTTGGAATGATTCTTATTCTCATCTTTGCTGAAGCACTTGCCCTCTACGGTCTTATTGTTGGAATCATTCTTTCTTCTCGGGCGGGCCAATCTCGTGCAGATTAA 441 46.03 MWSIGVDRMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7186948 7188800 - Lag0037553.1 Lac2g0915 598179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0915 146 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 140 - GO:0016021(PANTHER)
Lac2g0915 146 PRINTS Vacuolar ATP synthase 16kDa subunit signature 88 114 IPR000245 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lac2g0915 146 PRINTS Vacuolar ATP synthase 16kDa subunit signature 115 138 IPR000245 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lac2g0915 146 PRINTS Vacuolar ATP synthase 16kDa subunit signature 11 35 IPR000245 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lac2g0915 146 PRINTS Vacuolar ATP synthase 16kDa subunit signature 37 61 IPR000245 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lac2g0915 146 Gene3D - 1 143 IPR035921 -
Lac2g0915 146 FunFam V-type proton ATPase proteolipid subunit 2 143 - -
Lac2g0915 146 Pfam ATP synthase subunit C 6 57 IPR002379 GO:0015078(InterPro)|GO:0033177(InterPro)|GO:1902600(InterPro)
Lac2g0915 146 Pfam ATP synthase subunit C 78 136 IPR002379 GO:0015078(InterPro)|GO:0033177(InterPro)|GO:1902600(InterPro)
Lac2g0915 146 CDD ATP-synt_Vo_c_ATP6C_rpt1 9 61 - -
Lac2g0915 146 CDD ATP-synt_Vo_c_ATP6C_rpt2 70 137 - -
Lac2g0915 146 NCBIfam V-type ATPase subunit C 8 102 IPR011555 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lac2g0915 146 SUPERFAMILY F1F0 ATP synthase subunit C 68 137 IPR035921 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0915 Lac-Chr2:7186948 Lac6g0479 Lac-Chr6:3967474 7.30E-61 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0915 K02155 - gmx:100798638 241.121