Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0944 ATGGCGGAGGGAGCGATGTTCGACGGAGACGCGGCGGAGAGACTGGTGGCGGAACTAAGAGAGAGCTACAATTCCGGCAAGACGAGAAGCTTCGAATGGAGATTCAAGCAACTGAAGAATCTTCTGAAATTGGTCGATGAAAACGAGACACAGATGGTCGATACCGTCCATTCGGATCTTTCCAAACCCGAATTCGAAGCCTTCGCTCACGAGAATCACTCGAATCCATTCTTTTCCTGCAAAATCCTATCGCTCTTTTTATATTCTGATACTTGTCGGCGGCGGCGGCGGCGACTCGCGATGTCGGAGACGGAGGTGTTCGATGCGGCGGAGCTGGTCAAGGAACTGAGAGGAAGTTTTGCCTCCGGCAAGACTCGGAGCTATGAGTGGAGAGTGTCGCAGCTTGAGTGTCTCATGAAGCTCAGCGTTGACCACGAGGAAGATATCTGCGATGCGCTTCGCTCTGACCTCTCCAAGCCTGTGTTGGAATCCATCCTTCACGAGATAGCTTTGTTAAAAAGTTCGTGTAAATTGGCACTTAAAGAACTCAAGCGTTGGATGGCACCAGAAAAGGTTAAAACTTCAATCACCACATTTCCTTCGTCTGCTGCAATTGTACCAGAACCTTTCGGTGTTGTCTTGATCATTTCTGCTTGGAATTATCCATTCTTATTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCTGAAATTTCCCCAGCAACATCATCTTTAATGGCAAAACTTCTAGGGAAATATTTGGATACTTCTGCTGTAAAAGTTGTTGAGGGTGCTGTTGCTGAAACTTCTGCTTTGCTGGAGCAAAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTGGGGCGTATAGTGATGGCAGCTGCTGCCAAGCACCTTACACCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAATAGTTGATTCAAAAATCAATTTACAAGTTGCGAGTAGGCGGATTATTGTTGGTAAGTGGGGTTGTAACAATGGGCAAGCATGCATTGCACCTGATTATATCATAACGACGAAAGAATTTGCTCCAAAATTGGTGGAGTCTATGAAAAAAGAACTGGAGAGGTTTTATGGAAAGAATCCGTTCGAATCTAAAGATTTATCTCGCATTGTGAATGCTAACCACTTTGCTCGCTTGTCAAAGCTCTTAGACGATGATAAAGTTTCTGGCAAGATTGTGCATGGAGGTGAAAAGGACAAAGACAAATTACAGATTACTCCAACCCTCTTATTGGATGTCCCTCGAGACTCTCTGATTATGACGGAGGAGATCTTTGGTCCCTTACTTCCCATTCTCACGGTCGACAAACTGGAGGACAGTTTCGAAGTAGTGAACTCGGGCACAAAGCCACTTGCAGCATATCTATTTACCAACAACAAAAGGCTCAAGGAACAGTTCGTGGCTTGTATCTCTGCAGGGGGTGTGGCCATCAATGACACCACCTTACATCTTGCAGTTAGCACACTACCATTTGGAGGAGTTGGGGAGAGTGGAATGGGAGCTTACCATGGGAAGTTCTCTTTTGATGCATTTAGCCATAAGAAGGCTGTTCTTTACCGAAGTTTCGCAGGCGACGCGCCGATGAGATACCCGCCGTACACAAAGGGAAAGCTGAGAATTCTCAAGGCTATTCTTGGAGGTGACATATGGGGACTCATTCGTGCTCTTCTTGGATTGTCATAA 1746 45.76 MAEGAMFDGDAAERLVAELRESYNSGKTRSFEWRFKQLKNLLKLVDENETQMVDTVHSDLSKPEFEAFAHENHSNPFFSCKILSLFLYSDTCRRRRRRLAMSETEVFDAAELVKELRGSFASGKTRSYEWRVSQLECLMKLSVDHEEDICDALRSDLSKPVLESILHEIALLKSSCKLALKELKRWMAPEKVKTSITTFPSSAAIVPEPFGVVLIISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEISPATSSLMAKLLGKYLDTSAVKVVEGAVAETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVIVDSKINLQVASRRIIVGKWGCNNGQACIAPDYIITTKEFAPKLVESMKKELERFYGKNPFESKDLSRIVNANHFARLSKLLDDDKVSGKIVHGGEKDKDKLQITPTLLLDVPRDSLIMTEEIFGPLLPILTVDKLEDSFEVVNSGTKPLAAYLFTNNKRLKEQFVACISAGGVAINDTTLHLAVSTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKAILGGDIWGLIRALLGLS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7442545 7450062 + Lag0037582.1 Lac2g0944 598208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0944 581 SUPERFAMILY ALDH-like 108 553 IPR016161 GO:0016491(InterPro)
Lac2g0944 581 Pfam Aldehyde dehydrogenase family 108 538 IPR015590 GO:0016491(InterPro)
Lac2g0944 581 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 118 536 IPR016162 GO:0016491(InterPro)
Lac2g0944 581 FunFam Aldehyde dehydrogenase 117 321 - -
Lac2g0944 581 PANTHER ALDEHYDE DEHYDROGENASE 109 578 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
Lac2g0944 581 FunFam Aldehyde dehydrogenase 318 518 - -
Lac2g0944 581 CDD ALDH_F3FHI 109 540 - -
Lac2g0944 581 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 318 518 IPR016163 GO:0016620(InterPro)
Lac2g0944 581 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 314 321 IPR029510 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0944 Lac-Chr2:7442545 Lac5g2068 Lac-Chr5:39221682 1.50E-133 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0944 K00128 - csv:101219569 810.061