Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0955 ATGATCTTGGCTATGTGTTCATATTATTATGAGAAACAAGGAGCAGTTAGAGCCATTGATGGTGAAGCAAGAAGAAGATTGATTGGAATAATCACAACTATGGCAGAGAAAAGTCTCCGATGCATAGCCTTCGCCCACAAGTGGAGCGAAGACGAAGAACTCGACGAATCGAGATTGACATTGCTCGGGATAGTCGGTTTGAAGGATCCTTGCAGGCCAGGAGTTAGAGCAGTTGTAGAATCATGTAAAGCTGCAGGAGTGAACATCAAAATGGTGACAGGTGATAATCTGCACACAACAACAGCCATAGCAATTGAATGCGGAATACTAAACCTCGAGGACGCTACGAACGACGAAGTTGTCGTCGAGGGCATAAAATTTAGGCACTTTCCCCACCCCGGAAATGGCCGCCCGTGCCCACGACGTCGCCGCCTTCAGCATCAAAGGCTCCTCCGCCACCCTCAATTTCCCCGACCTCCTCCACCTCCTCCCCCGCCCCGTCTCCCTCGCCCCTCGCGACGTCCAAGCCGCCGCCGCCAAGGCCGCCCACATGCACAACCTCGACCTCAACAACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCTTCCGATTGCCTTCTTCTCGTGTTCCTCGTCAATCGTGGAGGATGGAGATGACCGGAAAAGTGGAAAAGTAGAGAAGAAAATAGAAAGGGCATTTTAG 729 52.26 MILAMCSYYYEKQGAVRAIDGEARRRLIGIITTMAEKSLRCIAFAHKWSEDEELDESRLTLLGIVGLKDPCRPGVRAVVESCKAAGVNIKMVTGDNLHTTTAIAIECGILNLEDATNDEVVVEGIKFRHFPHPGNGRPCPRRRRLQHQRLLRHPQFPRPPPPPPPPRLPRPSRRPSRRRQGRPHAQPRPQQPPLPRRRRPHRDHPTPHPRLPIAFFSCSSSIVEDGDDRKSGKVEKKIERAF 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7534550 7535278 - Lag0037593.1 Lac2g0955 598219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0955 242 MobiDBLite consensus disorder prediction 151 242 - -
Lac2g0955 242 Pfam haloacid dehalogenase-like hydrolase 50 118 - -
Lac2g0955 242 PANTHER CATION TRANSPORTING ATPASE 1 130 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Lac2g0955 242 Gene3D - 1 67 IPR023299 GO:0000166(InterPro)
Lac2g0955 242 MobiDBLite consensus disorder prediction 154 170 - -
Lac2g0955 242 PRINTS P-type cation-transporting ATPase superfamily signature 85 95 - -
Lac2g0955 242 PRINTS P-type cation-transporting ATPase superfamily signature 63 74 - -
Lac2g0955 242 SUPERFAMILY HAD-like 58 122 IPR036412 -
Lac2g0955 242 Gene3D - 68 151 IPR023214 -
Lac2g0955 242 MobiDBLite consensus disorder prediction 223 242 - -
Lac2g0955 242 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 75 IPR023299 GO:0000166(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0955 Lac-Chr2:7534550 Lac6g2759 Lac-Chr6:45313439 1.60E-65 dispersed
Lac2g0955 Lac-Chr2:7534550 Lac1g2669 Lac-Chr1:47943291 4.60E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0955 K01537 - csv:101218531 198.749