Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0965 ATGCGGTCTAGATCTGTTACGCCTTTTTCTTTTCCTTCACCCGGTTATAGATTATTGCCTTCAAACTCCCCGTCTCGTCTCACCGAGAGGCTTGTTGTGAACCTTATGCTCATTATTGTAATCCTTATTGACCTTCCTTTTGCTGCCAAAGTTTATAGCTACGACTTGAACACGTCTCGAACATTGCCGTATCTCCTCCGAGTCATAAGTGACCAAATTTTTTGTCATCTGCAGCGGCATAAAGTTAGAATGCATCAAAGCCAAACACCATCGACCAAACATGACAGTCAACTGAACGCCACCGTCCTCTTCCTCCATCTCCCTTTTGATTTCCTCTCTGTTTCACTTCTCGATTCGATCCTTTTCTCTACGAGTTTGATCGGAATTTTAACCTGTCGACGGCCGGCGGCGAGAGGCATGGCGGCAGTGGTCGGAGGAGGTGGTGGTAACGGAGGCGGTTTGATGATCGGCGGTGGAGATGTGTCGAAGGCGCATGCGGCTATGGCTTTGGTCCAAGTAATCAATGGAGGTTATCATGTTATCACCAAAGTCGCCCTCAATGTTGGGATGAACCAGCTCGTCTTTTGTCTCTTCCGCGACTTGTTGGCGCTCGCGATTCTTGCCCCTGTTGCTTATGTTCGTGAGAAACGGATTCGTTTGCCTATGACTAGAGACCTCCTCTTATCGTTCTTCATTCTTGGTTTAACGGGGATTTTCGGTAACCAGCTTCTTTTTCTTGTTGGACTTGGCTACACTAATCCAACTTATGCTGCTGCCATACAGCCTGCCATTCCAGTTTTTACGTTCCTATTTGCTGTCATGATGGGCACAGAGACTGTGAATTTCCTCAAACTGGAAGGACAGGCAAAGGTTGGAGGTACACTCGTTTGTGTCTCTGGTGCCATATTGATGGTTTTATTCCGTGGTCCAGCTTTGGTTGGAAACACTGAATCTGACTTCATGTTGCATAGTGAAATAAGTGCAAAGGGTCAGCCAGAGCCTGCTGGATGGCTATTGTCTAACTTTCTGGAGTATGGATTGGATCATTTTCATGTTGGGGTATTATGCTTGATTGGGAACTGTATGTGCATGGCTGCTTTCTTGGCTATCCAGGCACGGGTGTTGAAGAAGTATCCTGCCAACTTATCGGTCACGGCATATTCTTATTTCTTTGGTGTTATATTGATGGTGATCACATCTTTCTTCATGACCAACGAATCAACAGACTGGAGTTTAACGCAATCAGAGTTTTTTGCTGTCCTTTATGCTGGAATTTTTGCTTCTGCCATCAATTATGGACTCCTGACATGGTGCAATAAAATATTGGGGCCAGCGTTGGTCGCTCTTTACAACCCACTTCAACCTGCATTATCTGCGCTGTTGTCAAGAGTTTTTATAGGAAGCCCTATTTTCCTAGGAAGTGTTATGGGAGGATCACTTATAATTGCTGGTCTTTATTTGGTTACTTGGGCGTCGCATAGGGAACGACAAGCAACTACAGTTTTGATACCTCATTCAACCAGGTCCTCCGAACCACTCATTCACAAAGATGCATTGACTAACAAGTTTGCATATCAGATAGGACACATTTTCTCAGGGTCTGCCTCATCACCCAAATCTGTAGATTAG 1629 45.24 MRSRSVTPFSFPSPGYRLLPSNSPSRLTERLVVNLMLIIVILIDLPFAAKVYSYDLNTSRTLPYLLRVISDQIFCHLQRHKVRMHQSQTPSTKHDSQLNATVLFLHLPFDFLSVSLLDSILFSTSLIGILTCRRPAARGMAAVVGGGGGNGGGLMIGGGDVSKAHAAMALVQVINGGYHVITKVALNVGMNQLVFCLFRDLLALAILAPVAYVREKRIRLPMTRDLLLSFFILGLTGIFGNQLLFLVGLGYTNPTYAAAIQPAIPVFTFLFAVMMGTETVNFLKLEGQAKVGGTLVCVSGAILMVLFRGPALVGNTESDFMLHSEISAKGQPEPAGWLLSNFLEYGLDHFHVGVLCLIGNCMCMAAFLAIQARVLKKYPANLSVTAYSYFFGVILMVITSFFMTNESTDWSLTQSEFFAVLYAGIFASAINYGLLTWCNKILGPALVALYNPLQPALSALLSRVFIGSPIFLGSVMGGSLIIAGLYLVTWASHRERQATTVLIPHSTRSSEPLIHKDALTNKFAYQIGHIFSGSASSPKSVD 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7629148 7635308 - Lag0037603.1 Lac2g0965 598229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0965 542 SUPERFAMILY Multidrug resistance efflux transporter EmrE 199 307 - -
Lac2g0965 542 PANTHER WAT1-RELATED PROTEIN 166 503 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac2g0965 542 SUPERFAMILY Multidrug resistance efflux transporter EmrE 390 495 - -
Lac2g0965 542 Pfam EamA-like transporter family 166 287 IPR000620 GO:0016020(InterPro)
Lac2g0965 542 Pfam EamA-like transporter family 353 489 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0965 Lac-Chr2:7629148 Lac3g0449 Lac-Chr3:3424358 9.30E-61 dispersed
Lac2g0965 Lac-Chr2:7629148 Lac2g0178 Lac-Chr2:1356589 1.60E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0965 - - - 0.0