Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0989 ATGCCCCATTCTCAATTCCCAAGCATCTCTTCAACATTCCACTCTCACTCTTTCACTCTTTCACTCTCTCTCTCTCTCTCTCATCATCAGAAACGGACAGGAATCTTACAACTATCACAAGCTCACGGCGATTTTTGGTTTTTCTTAGCGTCACATTCACCGATTCATCTGCATTTCACGCTTGCTGGATCTTGGATCGGTTTGCAGGCGTTGTTTTCCTTCCAGCAGCTCGTGGTTACCAGATTACTATATGTTCAAGAAAACCATTCCAGTATTTGGTATCTCAGATGGTTTGTTGTAATTGGATTATGCTTGACTGGTGCCACCATGGGCTTCTATACGGTAAAATGGCAATGGCTACTGATTCTTCACATTGTACCGCTTTGCATGATAATGAACAGAAGCAGTGGTATTAGTTCTGATGGCGAGGCACTTTTGAGCTTCAAAGCAGCAATTCTTGATTCTGATGGTGTTCTTCTTCAATGGAAGCCAGAGGAACCCCATCCTTGTAAATGGAAAGGAGTAACGTGTGATCCAAAAACTAAGAGAGTGATATATCTGAGTCTTCCTGATCACAAACTTAGTGGATCTTTATCCCCTGAACTTGGAAAGCTTGACCACCTAAAAATTTTAGCTCTACATGACAATAACTTTTATGGGACAATTCCATCAGAATTAGGGAATTGCTCGCAGTTGCAGGGAGTGTTCCTTCAGGGTAATTACTTTAGTGGGTTCATTCCCAATGAATTGGGGAATCTTTCGGCACTTAAAAATTTAGATATTTCAAGTAACTCACTCGGTGGAAATATTCCCATCTCGCTGGGGAAGTTGAGCAAGCTTATTACTCTAAACGTGTCTGCCAATTTTCTGGTTGGATCAATACCGAATGTTGGCGTGCTAATAAATTTCTCGGAAAGCTCATTTCTTGGAAATCGTGGCTTGTGCGGGAAGCAAATAAATGTTATGTGCAAAGATGACAAAGAGGGACCAGGAACAAATGAGTCACCATTCTCAGTGGAAAATCAAATTGGGAGGAAGAAGTACTCTGGCCGACTACTTATAAGTGCTTCGGCAACTGTGGGTGCTTTACTGCTGGTTGCCCTTATGTGTTTCTGGGGTTGCTTTCTGTATAAAAAGTTCGGCAAAAATGAAAGTAAAGGTCTAGTGCTGGACGTTTGTGGAGGTGCTTCGGGTGTAATGTTTCACGGAGACTTGCCATACTCATCTAAAGATATTATTAAGAAATTTGAGTCATTGAATGAAGAACACATAATAGGATGTGGGGGCTTTGGAACCGTGTACAAGCTTGCAATGGATGATGGCAATATTTTTGCCTTGAAAAGAATTGTAAAATTGAATGAAGGCTTTGATCGTTTCTTTGAGAGAGAACTCGAAATCCTTGGAAGCATAAAACACAGGTTCCTTGTCAATTTGCGAGGATATTGCAATTCGCCTACATCAAAGCTGTTAATTTATGATTTCCTTCCTGGAGGCAGCCTTGATGAGGCACTACACGGTGTCCGTACTGAAGTATCTGAGCAACTGGACTGGGATGCACGCTTAAATATTATCATGGGAGCTGCAAAGGGACTTGCATATTTGCATCATGATTGCTCTCCACGGATCATTCACCGAGACATAAAATCAAGCAATATTTTACTTGATGCAAATTTGGAGGCTCGAGTTTCTGATTTTGGACTTGCGAAACTTTTAGAGGATGAAGAATCACATATCACAACTATTGTTGCAGGAACATTTGGTTATCTGGCTCCTGAGTATATGCAAAGTGGTAGAGCTACTGAAAAGACTGATGTATACAGTTTTGGGGTATTGGTACTTGAAGTGTTGAGCGGCAAACGCCCCACCGATGCGTCATTCATTGAGAAGGGGCTAAACATTGTTGGTTGGTTAAACTTTCTGGTCACAGAGAATCGACAACGAGAAATTGTTGACGCACAGTGCGAGGGCATGCAAACAGAGAGCCTCGACGCACTGCTTTCAGTTGCCATCCAATGTGTTTCGTCGAGTCCTGAGGATCGACCAACCATGCACAGGGTGGTCCAAATACTGGAATCTGAGGTTATGACTCCATGCCCAAGTGATTTCTACGATACAGATTAA 2121 42.2 MPHSQFPSISSTFHSHSFTLSLSLSLSHHQKRTGILQLSQAHGDFWFFLASHSPIHLHFTLAGSWIGLQALFSFQQLVVTRLLYVQENHSSIWYLRWFVVIGLCLTGATMGFYTVKWQWLLILHIVPLCMIMNRSSGISSDGEALLSFKAAILDSDGVLLQWKPEEPHPCKWKGVTCDPKTKRVIYLSLPDHKLSGSLSPELGKLDHLKILALHDNNFYGTIPSELGNCSQLQGVFLQGNYFSGFIPNELGNLSALKNLDISSNSLGGNIPISLGKLSKLITLNVSANFLVGSIPNVGVLINFSESSFLGNRGLCGKQINVMCKDDKEGPGTNESPFSVENQIGRKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNESKGLVLDVCGGASGVMFHGDLPYSSKDIIKKFESLNEEHIIGCGGFGTVYKLAMDDGNIFALKRIVKLNEGFDRFFERELEILGSIKHRFLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHGVRTEVSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDANLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLVTENRQREIVDAQCEGMQTESLDALLSVAIQCVSSSPEDRPTMHRVVQILESEVMTPCPSDFYDTD 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7826581 7836071 - Lag0037627.1 Lac2g0989 598253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0989 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g0989 706 SUPERFAMILY Protein kinase-like (PK-like) 405 690 IPR011009 -
Lac2g0989 706 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 180 296 IPR051564 GO:0016020(PANTHER)
Lac2g0989 706 Pfam Leucine Rich Repeat 207 229 IPR001611 GO:0005515(InterPro)
Lac2g0989 706 Pfam Leucine Rich Repeat 256 277 IPR001611 GO:0005515(InterPro)
Lac2g0989 706 Pfam Leucine rich repeat N-terminal domain 139 178 IPR013210 -
Lac2g0989 706 Gene3D Phosphorylase Kinase; domain 1 396 494 - -
Lac2g0989 706 SMART serkin_6 419 695 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0989 706 SUPERFAMILY L domain-like 138 298 - -
Lac2g0989 706 Pfam Protein kinase domain 421 688 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0989 706 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 495 701 - -
Lac2g0989 706 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 393 494 - -
Lac2g0989 706 ProSiteProfiles Protein kinase domain profile. 419 695 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0989 706 Gene3D Ribonuclease Inhibitor 138 325 IPR032675 -
Lac2g0989 706 ProSitePatterns Protein kinases ATP-binding region signature. 425 451 IPR017441 GO:0005524(InterPro)
Lac2g0989 706 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 138 300 - -
Lac2g0989 706 Gene3D Transferase(Phosphotransferase) domain 1 495 698 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0989 Lac-Chr2:7826581 Lac5g2273 Lac-Chr5:41421748 1.10E-234 dispersed
Lac2g0989 Lac-Chr2:7826581 Lac10g0377 Lac-Chr10:2941527 2.40E-133 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86000 PF00069 Pkinase 2.00E-45 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0989 - - - 0.0