Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1049 ATGATTATGGAGCAGTTAAAATGCTGCCTCCTTCAAATCTTTGTTGCTTTCGCTATTTCATTTCTGGTTAGTGCACAGGATCAATCAGGATTCATTAGCATTGACTGTGGGATTCCAAAGAATTCAAGCTACACAGACAGTGTAACAGGCATAAAGTACATTTCTGATGCAAACTTCACAGAAACTGGAGTAAGTAAGAGCATATCATCAGATTTCAATACCACTACTCTTCCACAGCAATTTTGGTATGTTAGAAGCTTTCCTGAAGGGGAGAGAAACTGTCTCATCATAAAGCTTGCTCAAGGTAAGGGTTTCAAGTATTTGATCCGAGCGAGTTTCATGTACGGAAACTATGACGGCGAAGGTAAAGCGCCGGTTTTTGATCTGTACATGGGAGTTAATAAATGGGATTCAGTAGTACTGAACAATGGATCCAGTATCATAACCAAAGAAGTTATACATGCACTTCCTACATCTTCTATATGCATATGTCTGGTGAATACTGGATTTGGATCACCTTTTATATCATCATTGGAGTTTAGGCTTTTGAAAAATGCTAGTTATGTGACCGATTTCGAATTGCTCGCTCTCTACAGACGGTTGGATGTAGGTTCAACTACCAACAGAACTGTCAGGTACAAAGATGATTTTTGTGATAGGATTTGGTTTCCTTTTAACTTTCTTGAGTACAAAATTATAAGCACTTCATCCACTGTTGATTCAGGAGCTAGCAACACTTATAATTTACCAAGAATTGTAATGAGCACTGCTATCACAACCAATAATGCCAGTACTCCTCTAGATTTTCAGTGGGTTCCTGAAGATCCCAGTGCCAAATATCATATATACTTGCACTTTGCTGATTTGGAAAAGCTCCAACCCAACCAATCAAGGGAATTTAGTGTTTTTCAAAATGGGAATCATTTATATGGACCTTTCTCTCCTGATTACATGCAATCAACTACACTGTTTAGCACATTCCCAATGAGTGGAGATGCTATTAGATTTTCATTATCAAAAACCAATGCATCAAATCTTCCACCCATCCTCAATGCTCTTGAAGTCTACAGGGTGCTAGATACATCACAATCGCGCACCGACGAGCAGGACGTTGCAGCTCTGATGAACATCAAATCATTTTATGGAGTGAGAAAGAATTGGCAGGGTGATCCATGCCTGCCAAAATCCTTCTTGTGGAACGGTATCGATTGTAGCTATGACGACCAGAGTCCTAATAGAATCACCTCCTTGAACTTATCTTCAAGTGGATTGGTGGGGGGAATAGCTACTTATGTATCCAAGCTCACATCATTACAATATTTGGATTTATCAAACAATAACTTGAGTGGACCGGTGCCTGGTTTTCTATCCGAGTTGTACTCCTTGAAAGTTTTAGATTTGAGGGGCAACCCCTTTCTTGGTTCTATTCCAAGCGAACTCACGGAAAGATCAAAGAACGGATCCCTTACAATAAGGGTTGGAGGAAATTCAGATCTTTGTGTTTCATCTTCTTGCCCAAAGAAGAAGAAGAGTTACATTATTCCTATTGTAGCAATAGTTTCATCATTGCTCGTCCTTTCAGCAGCAATAGCAGTCTGGATAATAAAATGGAGAAAACGAGCCCGAAAACTGCCAGTCATAAGACTCGGATCACTAGAGCCAAAGAAACAGCAGCTACCTTACTCACAAATACGGCGTATGACAAACAACTTCGAGACGAAAATCGGGGAAGGAGGATTCGCAAAAGTATTCCTTGGTTACTTGGATAACAATCAAGTTGCTGTGAAGGTCCTCAAGTCTTCAGTTCAAGGTTATAAAGAATTTGAAGCAGAGGTTAAACTTTTGCTAAGAATTCATCATACAAACTTGACAAGCCTTGTTGGATACTGCTATGAAAAGAACAACCTGGTTCTTATATATGAGTACATCAATAATGGCAACTTAAAAGAACATCTAACAGGTGGAAATGTTAGAGTTCTCAGTTGGGAGGAAAGGATGCAAATAGCAGTGGATGCAGCACAAGTGGGACCCACCACTCTTGGTTTAGGAGAAAAGAAATCAACAGGCAACAAGATAATAGCTTCTGATACTGAGGCTTACTTATCAAGTCCAGCCAATGACAAATCCCCTCATACTTCGGTTTGCGACCCTACATCGCCTCGGAACAAATTCCATTGGCAAGCTTACCTCCGACCTCCCACATTCCATCATTCCCCCATATTATTCCATCTCCCACAAAAGATGTTACCCCACTACAACAACCATCTAGCTCTCCACCTGAACCATCACCCCTTTCCCTCCCAACATATCTCTGTCATTTAG 2322 40.44 MIMEQLKCCLLQIFVAFAISFLVSAQDQSGFISIDCGIPKNSSYTDSVTGIKYISDANFTETGVSKSISSDFNTTTLPQQFWYVRSFPEGERNCLIIKLAQGKGFKYLIRASFMYGNYDGEGKAPVFDLYMGVNKWDSVVLNNGSSIITKEVIHALPTSSICICLVNTGFGSPFISSLEFRLLKNASYVTDFELLALYRRLDVGSTTNRTVRYKDDFCDRIWFPFNFLEYKIISTSSTVDSGASNTYNLPRIVMSTAITTNNASTPLDFQWVPEDPSAKYHIYLHFADLEKLQPNQSREFSVFQNGNHLYGPFSPDYMQSTTLFSTFPMSGDAIRFSLSKTNASNLPPILNALEVYRVLDTSQSRTDEQDVAALMNIKSFYGVRKNWQGDPCLPKSFLWNGIDCSYDDQSPNRITSLNLSSSGLVGGIATYVSKLTSLQYLDLSNNNLSGPVPGFLSELYSLKVLDLRGNPFLGSIPSELTERSKNGSLTIRVGGNSDLCVSSSCPKKKKSYIIPIVAIVSSLLVLSAAIAVWIIKWRKRARKLPVIRLGSLEPKKQQLPYSQIRRMTNNFETKIGEGGFAKVFLGYLDNNQVAVKVLKSSVQGYKEFEAEVKLLLRIHHTNLTSLVGYCYEKNNLVLIYEYINNGNLKEHLTGGNVRVLSWEERMQIAVDAAQVGPTTLGLGEKKSTGNKIIASDTEAYLSSPANDKSPHTSVCDPTSPRNKFHWQAYLRPPTFHHSPILFHLPQKMLPHYNNHLALHLNHHPFPSQHISVI 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8379646 8384036 + Lag0037687.1 Lac2g1049 598313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1049 773 SUPERFAMILY Protein kinase-like (PK-like) 552 674 IPR011009 -
Lac2g1049 773 Gene3D Ribonuclease Inhibitor 369 493 IPR032675 -
Lac2g1049 773 Gene3D Transferase(Phosphotransferase) domain 1 541 676 - -
Lac2g1049 773 Pfam Malectin-like domain 34 358 IPR024788 -
Lac2g1049 773 FunFam Leucine-rich repeat receptor-like kinase 369 502 - -
Lac2g1049 773 Pfam Protein tyrosine and serine/threonine kinase 571 674 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1049 773 ProSitePatterns Protein kinases ATP-binding region signature. 575 596 IPR017441 GO:0005524(InterPro)
Lac2g1049 773 SUPERFAMILY L domain-like 390 480 - -
Lac2g1049 773 ProSiteProfiles Protein kinase domain profile. 569 773 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1049 773 PANTHER OS07G0107800 PROTEIN-RELATED 24 673 - -
Lac2g1049 773 Pfam Leucine rich repeat 413 471 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1049 Lac-Chr2:8379646 Lac4g2949 Lac-Chr4:47826956 4.70E-159 dispersed
Lac2g1049 Lac-Chr2:8379646 Lac4g2937 Lac-Chr4:47700412 2.70E-138 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86001 PF12819 Malectin_like 4.00E-111 CL0202 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1049 - - - 0.0