Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1050 ATGGAATGTTTGACAGCAAAATTTGGTTGTAAGCAGGGTTCATGGCCTTCCACATATTTGGGGCTTCCTTTGGGAGGTAGTTCGAAAGGTTCTCAGTTTTGGCAGCCTGTTATTGAACGGATCCAACATAAGCTTCATAACTGGAAATACTCTTTTATTTCCAAAGGTGGTAGGCACACCCTCATCCAATCTACTCTCTCAAGTATGCCCACATATTACTTATCCTTATTTAAATTACCTTCTAAGGTTGCAAAATCTCTGGATAAGCTTATTCGAGATTTTTTTTGGGAGGGCTCCAGAGGCGAGGGCGGCATGCATAATGTAAATTGGGAGACAACTCAGCTTCCAAAATTTATGGGTGGAGTAGGCATTGGAAATTTCCATCACCGTAATTTGGCTCTCTTATCAAAATGGATTTGGAGGTTTTTACATGAAGATCTTGTTGCTAGTCGTATTCAGAGACGGCTTGGAAATGGTTGTTCCACCCTTTTTTGGCATGATTCTTGGCTAAGTTGTGGAGTCTCGTCTGAGGCTTTCCCTCGTCTTTATAGATTATCTAATCGCTCGGAAGGTACAGTTGCTGACTTTTGGGTTTCATTGAATTCGGCTTGGGATTTGAGTTTTCGTCGAAATTTAAATGATTCGGAGACAAATGAGTGGGCTAGTCTCTCTCATCTGCTTTCTTCCATCAGAATTCGAGTTATTGATGACACTTGGTCTTGGCCTATTGATTCGTCTAATGCATTCACAGTTAAATCTCTTATGGGAGATATGGTTGGTGATTCTGACCCCACATCGAGCAAATTATATAATGTGGTGTGGAAAGACGTTTATCCAAAGAAGATCAAAATTTTTATCTGGGAGCTTAGTCTTGGAGCTATTAATACGTCTGATCGACTTCAAAGGCGAATGCCTTATTTGCACCTTTCTCCATCCTGGTGTGTTATGTGTTGTTCTGATGCTGAAAATACTTGTCATCTATTTGTGCATTGCTCCTTTGCTTCCCGTTATTGGTCTACAATCTTCAATGCCTTTGAGTGGTCCTTGGCTCTACCAAACAACATTTATGATGTTCTTGCTTCCATTTTTGTGGGACATCCCTTCCATGGATTGGAGTATCTGCATCATGGTTGTAAGCCACCAATTGTTCACAGAGATGTGAAGTCTGCAAACATCCTTTTGAATGAAAAGTTCCAGGCCAAAATAGCTGATTTTGGTCTGTCCAAGAGTTTCCCGACCGAAAATCATACTCATTTGACGACCGTTGTTGCAGGAACCGATGGTTATCTCGATCCTGAGTATTATGCAACTGGCTGGTTGACCGAGAAAAGTGATGTATACAGTTTCGGAGTTCTTGCATTGGAAATAATCACTTCTCGCCCCGTTCTCAAAATTGATAGAGCTTCTTCAGAAAAATACCATATAGGCCCATGGGTTATGCAGTTGATGAAAACAGGTGATATAAGGAGCATTGTTGATGAAAGGTTAAGAGGAAACTTTGACTTGAGTTCTGCTTGGAAGGCTGTGGAGATTGCTATGACATGTTTGTCACTTGACTCTATTGAGAGGCCAAGTATGAAAGAGGTGGTTATGGAGTTGAGTGAGTGTTTGAAATTAGAGAGAGCTCGGAAAAGAAGAAACATCGATTTTAATACGAGAAAATCAAATGTAGTTAGTAGGAATTTCAGAGACAGTGAAGTAACACCTCGTGCTAGATAG 1719 40.78 MECLTAKFGCKQGSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWETTQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDLVASRIQRRLGNGCSTLFWHDSWLSCGVSSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVIDDTWSWPIDSSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHGLEYLHHGCKPPIVHRDVKSANILLNEKFQAKIADFGLSKSFPTENHTHLTTVVAGTDGYLDPEYYATGWLTEKSDVYSFGVLALEIITSRPVLKIDRASSEKYHIGPWVMQLMKTGDIRSIVDERLRGNFDLSSAWKAVEIAMTCLSLDSIERPSMKEVVMELSECLKLERARKRRNIDFNTRKSNVVSRNFRDSEVTPRAR 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8386436 8389174 + Lag0037688.1 Lac2g1050 598314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1050 572 Pfam Protein kinase domain 368 530 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1050 572 Pfam zinc-binding in reverse transcriptase 249 338 IPR026960 -
Lac2g1050 572 Gene3D Transferase(Phosphotransferase) domain 1 359 561 - -
Lac2g1050 572 FunFam Lectin-domain containing receptor kinase A4.3 359 550 - -
Lac2g1050 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1050 572 PANTHER OS07G0107800 PROTEIN-RELATED 371 541 - -
Lac2g1050 572 SMART serkin_6 265 537 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1050 572 ProSiteProfiles Protein kinase domain profile. 182 537 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1050 572 SUPERFAMILY Protein kinase-like (PK-like) 369 533 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0905 Lac-Chr10:7215968 Lac2g1050 Lac-Chr2:8386436 1.20E-15 dispersed
Lac2g1050 Lac-Chr2:8386436 Lac3g0439 Lac-Chr3:3358857 5.90E-223 dispersed
Lac2g1050 Lac-Chr2:8386436 Lac7g2422 Lac-Chr7:41338531 5.90E-215 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86002 PF00069 Pkinase 1.20E-25 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1050 - - - 0.0