Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g1114 | ATGTCGATCGCCGTTGCCATTTCAATCAGCATTCTGGTAGGCTCTCTTCTGGCATGGGGATGGAGGTTTCTGAACTGGATTTGGCTGAAGCCAAAGAAGCTCGAGAAGCACTTAAGACAGCAAGGCCTCACCGGAAGTTCCTATCGCCTTCTCTATGGCGATTCGAAGGACATGGCGACGGCGATTCGCGAGGCGAGATCGCAGCCGATGAACTTCTCTCATGATATTGCTCATCGCGCCGTCCCTTCCTCTCATATCACCATCAATAAATACGGTAAGAATTCTTTCGTATGGGTTGGCCCAACTCCCAGAGTGTATATAACGGATCCTGAACAACTTAAGGCTGTCTTTTCTCTCATCAATGACATTCGTAAAGCATCTTTGTTTCCTCTTGCAAGAAGACCTGGAGGTGGACTTGTCTCTCTCGAGGGGCCTAAATGGGCTAAACATAGAAAAATCATCAATCCAGCATTTCATACAGAAAAGTTGAAGAATATGTTTCCAGCATTCTCGGAGAGTTGTAATGAGATGATTAGAAAATGGGAAAAGATGGTCTCTGAGAAAGGGTCTTTTGAGTTAGATGTTTGGCCTGATTTGCAAAGTATGACTGCAGATGTGATTTCTCGAACAGCATTTGGGAGTAGCTATGAGGAAGGAAAAAAGATATTCCAATTTTTGAAAAACTGGATTTCCCTATTGGTAACATGTCTAACAAAGGGAGTCTACAATATTCCTGGGTGGAGGTTTATACCAACCAAGTTGAATAGGAAGATGGAAGAGATTACTAGAGAAATACATACTATGGTTTGTGGTATTATAACCAAAAGACAAATGGCTATGGAGGAGGGTGAAGCTTCTAATGCTGATCTATTAGGGATCCTTTTGGAATCCAATTTAAATCAAGTTGGAGAGCAAGAAAATAAGAAAGATGTTGGAATGAGTATGGAAGATATAATTAGTGAATGTAAGCTCTTTTATTTTGCTGGCCAAGAAACCACAGCAGCATTGCTTGTCTGGACAATGGTTCTACTTGGTCGGTATCCAGAATGGCAAGATCGAGCAAGAGCAGAAGTGCTTGAAGTTTTTGGTAATGACAACAAATTGGATTTTGATGGTTTAAGTCGTCTTAAAGTAGTAACCATGATACTAAATGAAGTTCTTAGACTCTATCCTCCCATTGGTATCTTAGCTCGAGCGATTCACAAGGAAACGAAACTTGGGAACTTGTTATTACCGGCCGGAGTGTCGATAGGTATACCGATCATTAACGTCCACCACGACTACCAAATATGGGGTGAAGATGCAAACGAGTTCAAACCAGAGCGGTTTTCGGAGGGAGTTTCCAAAGCAACAAAGAATCAAGTCTGCTTCTTGCCTTTCGGATGGGGTCCTCGGATTTGTGTTGGCCAAAACTTTGCCATGATCGAAGCAAAAATAGCACTGTCAATGATTTTGCAACGATTCTCTTTTGAACTTTCCCCATCTTATACTCATGCTCCTATTTCAAATGTCACTATTCAACCACAACATGGAGCTCATCTCATCCTCCATAAGCTGTAA | 1560 | 41.99 | MSIAVAISISILVGSLLAWGWRFLNWIWLKPKKLEKHLRQQGLTGSSYRLLYGDSKDMATAIREARSQPMNFSHDIAHRAVPSSHITINKYGKNSFVWVGPTPRVYITDPEQLKAVFSLINDIRKASLFPLARRPGGGLVSLEGPKWAKHRKIINPAFHTEKLKNMFPAFSESCNEMIRKWEKMVSEKGSFELDVWPDLQSMTADVISRTAFGSSYEEGKKIFQFLKNWISLLVTCLTKGVYNIPGWRFIPTKLNRKMEEITREIHTMVCGIITKRQMAMEEGEASNADLLGILLESNLNQVGEQENKKDVGMSMEDIISECKLFYFAGQETTAALLVWTMVLLGRYPEWQDRARAEVLEVFGNDNKLDFDGLSRLKVVTMILNEVLRLYPPIGILARAIHKETKLGNLLLPAGVSIGIPIINVHHDYQIWGEDANEFKPERFSEGVSKATKNQVCFLPFGWGPRICVGQNFAMIEAKIALSMILQRFSFELSPSYTHAPISNVTIQPQHGAHLILHKL | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8800660 | 8804500 | + | Lag0037752.1 | Lac2g1114 | 598378 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g1114 | 519 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 11 | 512 | IPR050665 | GO:0004497(PANTHER) | |
| Lac2g1114 | 519 | FunFam | Cytochrome P450 734A1 | 28 | 519 | - | - | |
| Lac2g1114 | 519 | PRINTS | E-class P450 group I signature | 88 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | PRINTS | E-class P450 group I signature | 202 | 220 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | Gene3D | Cytochrome P450 | 85 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac2g1114 | 519 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | PRINTS | P450 superfamily signature | 467 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | SUPERFAMILY | Cytochrome P450 | 87 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1114 | 519 | CDD | CYP72 | 81 | 515 | - | - | |
| Lac2g1114 | 519 | Pfam | Cytochrome P450 | 89 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac13g0396 | Lac-Chr13:2811414 | Lac2g1114 | Lac-Chr2:8800660 | 5.70E-32 | dispersed | |
| Lac13g0397 | Lac-Chr13:2816492 | Lac2g1114 | Lac-Chr2:8800660 | 1.70E-102 | dispersed | |
| Lac2g1114 | Lac-Chr2:8800660 | Lac2g1118 | Lac-Chr2:8896310 | 5.40E-183 | dispersed | |
| Lac2g1114 | Lac-Chr2:8800660 | Lac2g1116 | Lac-Chr2:8877095 | 1.40E-199 | proximal |
Pathway information