Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1118 ATGTACAAGGAGCTGACGAGGACAACCGGAGAGAAATCGGGCTGGGAGATGGACCAAAGAGGCGAAACCGGCAAGTGGGACGGGCCAAAACCGACAAGAAAGCACATGGTCGGCCTCGGTCATGGGCCGAGGCCGAGCCCATCCGGCTCCACTTGGTCCCCACCGCCTCTGGCCGCCTCTGTTCAGCCTGGTTTGTCCCGAAACGCCTCTGAATCCCTAAAAACCCTAGGACACCACACCGGTGTGCAGGTTTTCCGTCTTGCAGGCCACATCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGTCATGGTATTGGGATGGAGAGTTTTGAATTGGATTTGGGTGAGGCCAAAGAAATTAGAGAAGCTTCTAAGACAGCAAGGATTCACTGGAAATTCTTATAGAATTCTCTATGGAGATTCGAAGGAGAGAGCCAAGATGAGGGACCAGGCAATCTCAAAGCCAATGAAGAATTTCTCCAATGATATCGCTCCACGTGTCATTCCTTCCATTTATCAAACCATTCAGAATTATGGGAAGAACTCATTTATGTGGTTGGGCCCCATTCCAAGAGTGCACATCATGGACCCAAAACATCTTAAAACTGTGTTTTCAAAAATGAATGAAATCCAAAGGCCAGTTGGAAACCCCCTTATCAGGCTTGTTGCAGATGGACTTAACAATGATAAAGGAACAAAATGGGCTAACCACAGAAAGATAATTAACCATGCATTCCATTTACAAAAGTTGAAGGATATGGTACCAGCATTCTTTCATAGTTCTAACGAGATGGTTAGCAAATGGGAAAGCATGGTTTCTGAAAATGGATTTTGTGAATTGGATGTGATGCCTCATCTAAGAACGATGGCTGCTGACGTCATTTCTCAAACAGCATTTGGAAGTAGCTATGAGAAAGGAAAAAGGATCTTCGAGCTTCAAACTCAACTCCTTGAATTGGTGTTTAAAACTAACTTAGAGGTTTATATTCCAGGATGGAGTTTTCTACCCACGAAGTCAAACAATAAAATAAAAGAGATTTATAGGGAGATAAAAGCTTTGGTCGAGGGTATGATAAATGAAAGGCAAGAATCTAGGGAGGTAGGTGAAGCTATACACAATGATCTTTTAGGCATTCTCATGGAATCCAATTTCAATGAAATTCGAGAACATGGAGACAGTAAACATGCTGGAATGAGCATAGATGATGTAATTGAAAATTGCAAGCTTTTTTATCTTGCTGGGCAAGAAACTACTGCTACGTTACTAATTTGGACCATGATTTTGTTGAGTTCATATCCAAAATGGCAAGAGCGGGCAAGAGCAGAGGTCCGAGAGATCTTTGGTAACGAAAGACCACATTTCGATGGTTTAAATCGTCTAAAAGTTGTAACTATGATTATAAACGAGGTTCTGAGGTTTTACCCACCGGCAAATTTGATTCACCGTGTTGTGAAAAAGGAAACAAAGCTTGAGAATTTGACATTACCAGCTGGAGTGCTGGTGGCCATACCAACTATTCTCATCCATCGTGAGCGTGAGCTATGGGGTGAAGATGCAGATGATTTCAAACCAGAGAGATTTTCGGAGGGAGTTTCTAAGGCAACAAATAATAATCCACTTGCTTTCTTACCGTTTGGTTGGGGTCCTCAAATATGCCTCGGACAGAACTTCTCCATGATTGAGGCAAAAATAGCAATATCAATGATTCTACAACGCTTTTCATTTGAGCTTTCTTCATCCTACACTCACGCTCCTTCCGCTGATTTCACAATGCAACCTCAACATGGAGCTCATATCATCCTACACAAACTCTAG 1833 42.94 MYKELTRTTGEKSGWEMDQRGETGKWDGPKPTRKHMVGLGHGPRPSPSGSTWSPPPLAASVQPGLSRNASESLKTLGHHTGVQVFRLAGHIFPRSQTNSLSIITWSEVMVLGWRVLNWIWVRPKKLEKLLRQQGFTGNSYRILYGDSKERAKMRDQAISKPMKNFSNDIAPRVIPSIYQTIQNYGKNSFMWLGPIPRVHIMDPKHLKTVFSKMNEIQRPVGNPLIRLVADGLNNDKGTKWANHRKIINHAFHLQKLKDMVPAFFHSSNEMVSKWESMVSENGFCELDVMPHLRTMAADVISQTAFGSSYEKGKRIFELQTQLLELVFKTNLEVYIPGWSFLPTKSNNKIKEIYREIKALVEGMINERQESREVGEAIHNDLLGILMESNFNEIREHGDSKHAGMSIDDVIENCKLFYLAGQETTATLLIWTMILLSSYPKWQERARAEVREIFGNERPHFDGLNRLKVVTMIINEVLRFYPPANLIHRVVKKETKLENLTLPAGVLVAIPTILIHRERELWGEDADDFKPERFSEGVSKATNNNPLAFLPFGWGPQICLGQNFSMIEAKIAISMILQRFSFELSSSYTHAPSADFTMQPQHGAHIILHKL 610
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 8896310 8904111 + Lag0037756.1 Lac2g1118 598382
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1118 610 MobiDBLite consensus disorder prediction 1 63 - -
Lac2g1118 610 PRINTS E-class P450 group I signature 295 313 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 PRINTS E-class P450 group I signature 558 581 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 PRINTS E-class P450 group I signature 408 425 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 PRINTS E-class P450 group I signature 181 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 PRINTS E-class P450 group I signature 428 454 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 PRINTS E-class P450 group I signature 548 558 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 MobiDBLite consensus disorder prediction 1 34 - -
Lac2g1118 610 Pfam Cytochrome P450 181 587 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 SUPERFAMILY Cytochrome P450 172 608 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 PANTHER CYTOCHROME P450 FAMILY MEMBER 108 602 IPR050665 GO:0004497(PANTHER)
Lac2g1118 610 FunFam Cytochrome P450 734A1 120 610 - -
Lac2g1118 610 PRINTS P450 superfamily signature 419 436 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 PRINTS P450 superfamily signature 549 558 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 PRINTS P450 superfamily signature 558 569 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g1118 610 Gene3D Cytochrome P450 162 609 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1029 Lac-Chr1:27017369 Lac2g1118 Lac-Chr2:8896310 1.60E-12 dispersed
Lac2g1114 Lac-Chr2:8800660 Lac2g1118 Lac-Chr2:8896310 5.40E-183 dispersed
Lac2g1118 Lac-Chr2:8896310 Lac2g2843 Lac-Chr2:44657521 2.80E-207 dispersed
Lac2g2748 Lac-Chr2:42793740 Lac2g1118 Lac-Chr2:8896310 5.90E-08 dispersed
Lac2g1117 Lac-Chr2:8885296 Lac2g1118 Lac-Chr2:8896310 2.50E-204 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1118 - - - 0.0