Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g1118 | ATGTACAAGGAGCTGACGAGGACAACCGGAGAGAAATCGGGCTGGGAGATGGACCAAAGAGGCGAAACCGGCAAGTGGGACGGGCCAAAACCGACAAGAAAGCACATGGTCGGCCTCGGTCATGGGCCGAGGCCGAGCCCATCCGGCTCCACTTGGTCCCCACCGCCTCTGGCCGCCTCTGTTCAGCCTGGTTTGTCCCGAAACGCCTCTGAATCCCTAAAAACCCTAGGACACCACACCGGTGTGCAGGTTTTCCGTCTTGCAGGCCACATCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGTCATGGTATTGGGATGGAGAGTTTTGAATTGGATTTGGGTGAGGCCAAAGAAATTAGAGAAGCTTCTAAGACAGCAAGGATTCACTGGAAATTCTTATAGAATTCTCTATGGAGATTCGAAGGAGAGAGCCAAGATGAGGGACCAGGCAATCTCAAAGCCAATGAAGAATTTCTCCAATGATATCGCTCCACGTGTCATTCCTTCCATTTATCAAACCATTCAGAATTATGGGAAGAACTCATTTATGTGGTTGGGCCCCATTCCAAGAGTGCACATCATGGACCCAAAACATCTTAAAACTGTGTTTTCAAAAATGAATGAAATCCAAAGGCCAGTTGGAAACCCCCTTATCAGGCTTGTTGCAGATGGACTTAACAATGATAAAGGAACAAAATGGGCTAACCACAGAAAGATAATTAACCATGCATTCCATTTACAAAAGTTGAAGGATATGGTACCAGCATTCTTTCATAGTTCTAACGAGATGGTTAGCAAATGGGAAAGCATGGTTTCTGAAAATGGATTTTGTGAATTGGATGTGATGCCTCATCTAAGAACGATGGCTGCTGACGTCATTTCTCAAACAGCATTTGGAAGTAGCTATGAGAAAGGAAAAAGGATCTTCGAGCTTCAAACTCAACTCCTTGAATTGGTGTTTAAAACTAACTTAGAGGTTTATATTCCAGGATGGAGTTTTCTACCCACGAAGTCAAACAATAAAATAAAAGAGATTTATAGGGAGATAAAAGCTTTGGTCGAGGGTATGATAAATGAAAGGCAAGAATCTAGGGAGGTAGGTGAAGCTATACACAATGATCTTTTAGGCATTCTCATGGAATCCAATTTCAATGAAATTCGAGAACATGGAGACAGTAAACATGCTGGAATGAGCATAGATGATGTAATTGAAAATTGCAAGCTTTTTTATCTTGCTGGGCAAGAAACTACTGCTACGTTACTAATTTGGACCATGATTTTGTTGAGTTCATATCCAAAATGGCAAGAGCGGGCAAGAGCAGAGGTCCGAGAGATCTTTGGTAACGAAAGACCACATTTCGATGGTTTAAATCGTCTAAAAGTTGTAACTATGATTATAAACGAGGTTCTGAGGTTTTACCCACCGGCAAATTTGATTCACCGTGTTGTGAAAAAGGAAACAAAGCTTGAGAATTTGACATTACCAGCTGGAGTGCTGGTGGCCATACCAACTATTCTCATCCATCGTGAGCGTGAGCTATGGGGTGAAGATGCAGATGATTTCAAACCAGAGAGATTTTCGGAGGGAGTTTCTAAGGCAACAAATAATAATCCACTTGCTTTCTTACCGTTTGGTTGGGGTCCTCAAATATGCCTCGGACAGAACTTCTCCATGATTGAGGCAAAAATAGCAATATCAATGATTCTACAACGCTTTTCATTTGAGCTTTCTTCATCCTACACTCACGCTCCTTCCGCTGATTTCACAATGCAACCTCAACATGGAGCTCATATCATCCTACACAAACTCTAG | 1833 | 42.94 | MYKELTRTTGEKSGWEMDQRGETGKWDGPKPTRKHMVGLGHGPRPSPSGSTWSPPPLAASVQPGLSRNASESLKTLGHHTGVQVFRLAGHIFPRSQTNSLSIITWSEVMVLGWRVLNWIWVRPKKLEKLLRQQGFTGNSYRILYGDSKERAKMRDQAISKPMKNFSNDIAPRVIPSIYQTIQNYGKNSFMWLGPIPRVHIMDPKHLKTVFSKMNEIQRPVGNPLIRLVADGLNNDKGTKWANHRKIINHAFHLQKLKDMVPAFFHSSNEMVSKWESMVSENGFCELDVMPHLRTMAADVISQTAFGSSYEKGKRIFELQTQLLELVFKTNLEVYIPGWSFLPTKSNNKIKEIYREIKALVEGMINERQESREVGEAIHNDLLGILMESNFNEIREHGDSKHAGMSIDDVIENCKLFYLAGQETTATLLIWTMILLSSYPKWQERARAEVREIFGNERPHFDGLNRLKVVTMIINEVLRFYPPANLIHRVVKKETKLENLTLPAGVLVAIPTILIHRERELWGEDADDFKPERFSEGVSKATNNNPLAFLPFGWGPQICLGQNFSMIEAKIAISMILQRFSFELSSSYTHAPSADFTMQPQHGAHIILHKL | 610 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8896310 | 8904111 | + | Lag0037756.1 | Lac2g1118 | 598382 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g1118 | 610 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
| Lac2g1118 | 610 | PRINTS | E-class P450 group I signature | 295 | 313 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | PRINTS | E-class P450 group I signature | 558 | 581 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | PRINTS | E-class P450 group I signature | 408 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | PRINTS | E-class P450 group I signature | 181 | 200 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | PRINTS | E-class P450 group I signature | 428 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | PRINTS | E-class P450 group I signature | 548 | 558 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Lac2g1118 | 610 | Pfam | Cytochrome P450 | 181 | 587 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | SUPERFAMILY | Cytochrome P450 | 172 | 608 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 108 | 602 | IPR050665 | GO:0004497(PANTHER) | |
| Lac2g1118 | 610 | FunFam | Cytochrome P450 734A1 | 120 | 610 | - | - | |
| Lac2g1118 | 610 | PRINTS | P450 superfamily signature | 419 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | PRINTS | P450 superfamily signature | 549 | 558 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | PRINTS | P450 superfamily signature | 558 | 569 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | PRINTS | P450 superfamily signature | 471 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g1118 | 610 | Gene3D | Cytochrome P450 | 162 | 609 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac1g1029 | Lac-Chr1:27017369 | Lac2g1118 | Lac-Chr2:8896310 | 1.60E-12 | dispersed | |
| Lac2g1114 | Lac-Chr2:8800660 | Lac2g1118 | Lac-Chr2:8896310 | 5.40E-183 | dispersed | |
| Lac2g1118 | Lac-Chr2:8896310 | Lac2g2843 | Lac-Chr2:44657521 | 2.80E-207 | dispersed | |
| Lac2g2748 | Lac-Chr2:42793740 | Lac2g1118 | Lac-Chr2:8896310 | 5.90E-08 | dispersed | |
| Lac2g1117 | Lac-Chr2:8885296 | Lac2g1118 | Lac-Chr2:8896310 | 2.50E-204 | tandem |
Pathway information