Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1151 ATGTTTGTGGGTCGATTCCTCGCCGTGGTTTTCCTCTTCTCCCTCGCTTCCGACGGCGCTCGGCTGCCGGACGAGGAAGTGGAGGCGCTGAAGGAGATCGGAAAGACATTGGGGAAGGCGGACTGGAATTTCTCGGCCGATCCATGCGGCGGTTTGAGTAGCGGTTGGATATCGGATTCTTCATTATTCGACGCTAATTTTGTTAATAATGTCACCTGCAGCTGCACCTTCCACCCAAATACACTCTGTCACGTCACTAACATTCTTCTAAAGGGGCAGAGCCTTCAAGGTACTCTGCCACCGCAAATAGTGAGGTTGCCTTTCCTGCGGGAACTTGATCTCACCCGCAACTATCTCAGCGGCTCAATTCCTCCAGAATGGGGTTCCACCAAGCTCGTCAAGATTTGCCTTCTTGGAAATCGATTGACGGGTTCAATCCCAAAAGAGATTGCAAACATCAGCACTCTTACAGAGTTGGTCCTGGAAATGAATCACTTCTCTGGAACAGTACCTCCCGAACTTGGAAATTTGACCAGGTTATCAAGATTACTTCTTACCTCAAACAACTTTTATGGGGAGCTCCCACCTTCACTGGCAAGGATAACCTCATTGACGGACTTCCGCATCACTGATAATAACTTCACAGGGCCAATACCCAAGTTTATACAGAATTGGACGAATCTTCAAAGAATAAATATTCAGGCAAGCGGGTTGAGTGGGCCAATTCCTTCTGAAATTGGACTTTTGACAGGATTAACCGATCTGAGAATTAGTGACTTGAATGGAGATTCATCACCCTTTCCACCCCTTGCTAATTTGACAAAATTGAAAAACCTGATATTGAGGAGTTGCAATATAATTGGGGAACTGCCCGACAATCTGGATGGGTTGACATCATTGAAACTCTCAGACTTCAGCTTCAACAAAATTACTGGACCAATACCTGCCAGCTTTGAAGCTTTGAAAGGAGGGGATAATATGTTTTTAACTGGAAACTTGCTAAATGGTTCCGTGCCCACTTGGATGCTACTAGATCAAGGAATAAACATTGATCTCTCTTATAACAGATTTACTCAGACAAATGATCTGAACGCTGGTTGTCAACAACAAAGAGTAAACCTTTTTGCGAGCTCTTCAGAGGACAGTAATTCGAGTGGAACGGTTTCTTGCCTAGCAAGCGCTTGTCCAGAACCTTGGTACTCTGTCCATATCAACTGCGGTGGGAATGATGAAATAATCGACGGAACCTTTTTTAATGGAGACAATAATGCTGGCACATCATCATTGTTTTTTCAAGAACGTGGAGCAAATTGGGGATTTAGCAACACTGGTAGTTTTATGGACAATGGTCTCGCAGCAGACTACTTTATTGCACTAAATTCATCTGCTCTCTCAATGCCAAATCCTGGATTCTACACGAGGGCACGCATTTCTCCCATCTCTCTTACTTATTATGCATATTGCATGGGTAATGGAAACTACACAGTAAGCCTCCATTTTGCCGAGATAATGTTTACTGATGACAAATCATACGGAAGCCTTGGCAGACGCGTATTTGATGTCTACATTCAGAGAAAGCTGGAGTTGAAGGATTTTAATATTGCTGATGCAGCAGGTGGTGTTGGCAAACCTATTGTAAAGAAATTCACTGTTTCTGTGACTGATGGTACAATAGAGATCCGTCTATTTTGGACCGGGAAGGGGACAAATGCAATCCCTGTTAGAGGAGTTTATGGTCCTCTAATTTCAGCCATTTCTATTGATCCTGACTTTGTTCCACCATCAGAAGGTGGAGGAAATAGCTTATCTGCTGGTGTAGTGGTTGGAATTGTGGCTGTTGTGGTCTTTATTATCATCTCAGTTCTTGGAGTCTTGTGGTGGGGAGGCTGCCTAAGAAAGAATGGCAAACTCGAACTAGAGTTGAACGGTCTAGATCTAGGAACACGTTCATTTTCATTAAGGCAAATTAGAGCCGCCACTAATAATTTTGATGGTGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGTGTTCTTGTAGATGGCACCGTAATTGCAGTGAAGCAACTTTCTTCAAAATCAAAGCAAGGAAATCGTGAATTTGTAAATGAGATAGGTCTGATATCTGCATTGCAACATCCTCATCTAGTGGAACTTTATGGATGTTGTATTGAAGGAAATCAACTTTTGCTAATATACGAGTATATGGAAAATAATAGTCTTGCTCGTGCCTTATTTGGACCGGAAGAATGTCAACTAAAATTGGATTGGACAACTAGGCACAAGATCTGTGTTGGTATAGCTAGAGGTTTAGCATACCTTCACGAGGAGTCAAGACTTAAAATTGTTCATCGAGACATCAAAGCTACCAATATTCTTCTTGATAAAAATCTCAACTCCAAGATTTCTGACTTCGGTTTGGCCAAGTTGGATGACGAAGAAGAAAATACACACATTAGCACCCGTGTTGCTGGAACCTATGGGTATATGGCACCAGAATACGCCTTGAGAGGCTACTTAACTGACAAAGCAGATGTTTATAGCTTTGGCATCGTGGCGTTGGAAATAGTTGGTGGTCGAAGCAACTTAAGTTTCCAAGCCAAGGCAGATTGCTTTCACCTTCTTGACCATGCAATTGCTTTAAAAAAGAGAGACAGTTTATTAGAGTTTGTCGATCCACGATTAGGCTCTAAATTCAACAAGAAAGAGGCAATGGCGATGATCAATATTGCTCTCCAATGCACAAACGCCACTCCTGCAGACAGACCAACCATGTCATCAGTGGTGAGCATGCTGGAAGGGAAGGTTGTTGTGAAGGAGGTGGTTTCAAGTCCTTGCGTCTCGAAACAAGATGAGAATGCAAGGTGGCGCCAAATTTGTCGCCTGAAAGAGCAAACGGCAGGCAAGAGCCCAACGCAAAGTGTGGCGACAGAAGGACCATGGACTGGTTCTTCGAATACTGACAGTGATATATATCCCATCCTCTTAGATTCTAAATACTTGGAGAGTAGGAACTAG 3027 43.31 MFVGRFLAVVFLFSLASDGARLPDEEVEALKEIGKTLGKADWNFSADPCGGLSSGWISDSSLFDANFVNNVTCSCTFHPNTLCHVTNILLKGQSLQGTLPPQIVRLPFLRELDLTRNYLSGSIPPEWGSTKLVKICLLGNRLTGSIPKEIANISTLTELVLEMNHFSGTVPPELGNLTRLSRLLLTSNNFYGELPPSLARITSLTDFRITDNNFTGPIPKFIQNWTNLQRINIQASGLSGPIPSEIGLLTGLTDLRISDLNGDSSPFPPLANLTKLKNLILRSCNIIGELPDNLDGLTSLKLSDFSFNKITGPIPASFEALKGGDNMFLTGNLLNGSVPTWMLLDQGINIDLSYNRFTQTNDLNAGCQQQRVNLFASSSEDSNSSGTVSCLASACPEPWYSVHINCGGNDEIIDGTFFNGDNNAGTSSLFFQERGANWGFSNTGSFMDNGLAADYFIALNSSALSMPNPGFYTRARISPISLTYYAYCMGNGNYTVSLHFAEIMFTDDKSYGSLGRRVFDVYIQRKLELKDFNIADAAGGVGKPIVKKFTVSVTDGTIEIRLFWTGKGTNAIPVRGVYGPLISAISIDPDFVPPSEGGGNSLSAGVVVGIVAVVVFIIISVLGVLWWGGCLRKNGKLELELNGLDLGTRSFSLRQIRAATNNFDGANKIGEGGFGPVYKGVLVDGTVIAVKQLSSKSKQGNREFVNEIGLISALQHPHLVELYGCCIEGNQLLLIYEYMENNSLARALFGPEECQLKLDWTTRHKICVGIARGLAYLHEESRLKIVHRDIKATNILLDKNLNSKISDFGLAKLDDEEENTHISTRVAGTYGYMAPEYALRGYLTDKADVYSFGIVALEIVGGRSNLSFQAKADCFHLLDHAIALKKRDSLLEFVDPRLGSKFNKKEAMAMINIALQCTNATPADRPTMSSVVSMLEGKVVVKEVVSSPCVSKQDENARWRQICRLKEQTAGKSPTQSVATEGPWTGSSNTDSDIYPILLDSKYLESRN 1008
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9204393 9215068 - Lag0037789.1 Lac2g1151 598415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1151 1008 Gene3D - 400 589 - -
Lac2g1151 1008 Gene3D Transferase(Phosphotransferase) domain 1 739 950 - -
Lac2g1151 1008 Gene3D Ribonuclease Inhibitor 223 372 IPR032675 -
Lac2g1151 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 739 947 - -
Lac2g1151 1008 MobiDBLite consensus disorder prediction 968 991 - -
Lac2g1151 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 399 590 - -
Lac2g1151 1008 CDD STKc_IRAK 669 935 - -
Lac2g1151 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 945 IPR051824 -
Lac2g1151 1008 SUPERFAMILY Protein kinase-like (PK-like) 647 936 IPR011009 -
Lac2g1151 1008 Pfam Protein tyrosine and serine/threonine kinase 667 935 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1151 1008 SUPERFAMILY L domain-like 72 341 - -
Lac2g1151 1008 Gene3D Ribonuclease Inhibitor 155 222 IPR032675 -
Lac2g1151 1008 Gene3D Ribonuclease Inhibitor 28 154 IPR032675 -
Lac2g1151 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1151 1008 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 23 261 - -
Lac2g1151 1008 Pfam Leucine Rich Repeat 109 128 IPR001611 GO:0005515(InterPro)
Lac2g1151 1008 Pfam Leucine Rich Repeat 156 177 IPR001611 GO:0005515(InterPro)
Lac2g1151 1008 SMART serkin_6 663 935 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1151 1008 Pfam Malectin domain 401 585 IPR021720 -
Lac2g1151 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 632 738 - -
Lac2g1151 1008 ProSiteProfiles Protein kinase domain profile. 663 941 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1151 1008 Gene3D Phosphorylase Kinase; domain 1 632 738 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1151 Lac-Chr2:9204393 Lac2g1158 Lac-Chr2:9264824 0.00E+00 dispersed
Lac2g1150 Lac-Chr2:9184255 Lac2g1151 Lac-Chr2:9204393 0.00E+00 tandem
Lac2g1151 Lac-Chr2:9204393 Lac2g1152 Lac-Chr2:9216780 1.40E-45 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86009 PF07714 PK_Tyr_Ser-Thr 4.50E-49 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1151 - - - 0.0