Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1155 ATGAAGAAGGTAACAGGCGGCGGCGTCGACGGCATGGGCGGCGTCGACGGCATGGGCGGCGGCTACGATAGCATGGGCGGCGGCGACAAGGGAAAGGAGGGAGAGAGGAATGAAAGGGGAGTGTTTCGGGCCAACTGGTCTTCTTCTTCATTCACCAGCGGGCTTCTTCTTCAATCACACCGGCGGCCGCCGGCCGCCGCTCGCCGACGACCGGTAAGTTTTTTTGTCCTCTTTATTTCTCTCTCCCTCACCGTCTCCTTCTCTCTCACAGTCCCTCTCTCTCTCACTGCCTTTCTGAAACCCTTTCCGGCGAGATCTAGGCTTGGGTTCGAGCTCGACGGGCGTGACCTGAATCGCGGCGAGATCTACCTACTCGAGCTTGAAATAGAAGAGAACGAAGAGGACGGAGGAAGATCGACTTGCCGGCGAAGAATAGACGCGAGGGAGAGAGAACGAGCGGGTTCAGCCAGATCTCGTGGGTACAGACGCGAGCTGTGGGTTTTCCGTTTAGAGACTCGTCTCGGTTCGAGGTCTGTTAGAGTTGCCGGCGTGGGTATTGCAACAGTCGCCGGTGTGGGTCTTGTAGCTGTCGCCGGCGTGGTTCCCTCCCTCTTTCGTTTTTTTTTTAAAAAAGAAAAACAGAAGTATTGGGAAAAGAAGAAAAGAGAAGAAGAAGAGAATAAACTTTCAAAAAAAAAAAAAGAAGTTGCCGGCGGCGACGGCCGGCCGCCGGCGAACGGCGGTCGACGGTGGCCGACGGCTGCCGACGATAGGGTTACAAGGAAGATGAAGATAAGGTCTCCTAAAGGCGCAGAGCCTTCAAGTGATCTCACCCGCAACTATCTCAGCGGCCCAATTCCTAAAGAATGGGGTTCCACCAAGCTTGTCATCATTTCCCTTCTTGGAAATCGATTGACTGGTCCAATCCCAAAAGAGATTGGAAACATCAGCACTCTTACACAGTTGGTCCTGGAAATGAATAATTTTTCTGGAACAATACCTCCCGAACTTGGAAATTTGACCAGCTTATCAAGATTACTTCTTACCTCAAATAACTTTTATGGGGAGCTCCCACCTTCACTGGCAAAGATAACCTCATTGACGGACTTCCGCATCACTGATAATAACTTCACAGGGCCAATACCCAAGTTTATACAGAATTGGACGAATCTTCAAAGAATACTTATTCAGGCAAGCGGGTTGAGTGGGCCAATTCCTTCTGAAATTGGACTTTTGACAGAATTAACAGACGTGCGAATTAGTGACTTGAATGGAGGTTCATCATCCTTTCCACCCCTTGCTGATTTGACAAAATCGAAAACCCTGATATTGAGGAGTTGCAATATAATTGGGGAGCTGCCCGACAATCTTGATGGGTTGAAAGAATTGGTAACTTTAGACTTCAGCTTCAACAAAATTACCGGACCAATACTTGGTCGCTTTAGGGAGTTGACAAAATTGGATAGCATAGAGTTCTTTGCTGTTTTTCCAATATTCCTCCAGTCCATTTCCTTTATTCTTCTTCAATGGCGGGAGATTCTACTAATCACTCTGATCCAGTTTCTTCTTCTTCAGCGAACCAAACTTCTGTCCAACCTACCAATCAATCTGTTATCGATCTGTACGAGATACCAGCGAAAGAATAGATCGAGAGTTTTCCAATTACGGCGAGAAATCTCTAATTTGAGCCAAGATCAACAAACTGTCACTCAGTACTTTGCAAAACTAAAGACCCTATGGAACGAGCTTGTTTCTTACCGTCCTTCGTGTTCTTGCGGGCGTTGCAACTGTGGTGGTGTAAAGGAATTCATTCAGTATTTTCAAACTGAGCACGTCATGCGTGCCTCAATTGTTCCTGTCACTTCTAATGAAGTAAATGCTGCTGCTCTTCTTGCCAAAACCTCACAAAAGGGTAGCCACCATTTCTTCGCATCCGCTTGTCAAACCGAATCAAATTCAGCAACTTTACCAGGCCTCTCTGCAGAACAGTGTCAAGGACTTTTGACAATGTTACAGTCACATCTTGCTGCTGTCAAAGTAGATTCTGAATCAACCTCTGCTGTTAATTCACAGTATCAAGGACTTTTGACAATGTTACAGTCACATCTTGCTGCTGTCAAAGTAGATTCTGAATCAACCTCTGCTGTTAATTCACATGTAGCAGTTGATGACTTTTCTCGATACATCTGGACGTTTCTAATGAAGAGTAAATCAGATGCTTTGAAGATTGTTCCACAGTTTTTTGTGAGTTATCCACCAATTTTCTCGTGTGGAGTGCCCCCAACAAAACTCTATCGTGGAAAGGAAGCATCAACATCTCCTAAATGTTGCACGCTCATTACTCTTCCAGTCCAGAATACCTATCATCTTTTGGAATTGAAATTTCATCCCAGGGCTATTCCAGCTGTGTTTGTCGGATATCCTCAAGGTACAAAGGGATACAAGCTTTATGATATACAAAATAAACGATTTTTTGTGTCTCGCAATGTGATATTCCATGAGAATATCTTTCCGTTTCATCAGACCACACTGCAGGGCGATATTGTTGATTTGTTCCCTAACTTAGTCTTGCCGAAGTCCTTCAATTATGATGGCATTCCTTCTGTGCCTACTCTTCATGTGAATGTTCCAAATCCTTCACATGATCTGGCCACACTCACTAATTGTGATCCTGCTCAAATTAGTGCTTCTGAGTCTTCTGAATCTAATGAAGCCTCTAATATCGAAAGACCATCCAATGTTGAAGTTTCTCTCAATCGTCCAAGGAGATCCACTCAAAAAACGAAACAACCTTCTTATTTGAAGGACTTTCATTGCAGCCTACTTGAGACAAACACATGCCTTCCTACTAGCAACAAGTTTCCCTTGCAGAAATATTTGTCATATGAACAGTTGTCTCCACAATATAAGAAGTTTGTCCTCAACATTTCAACTTCTTATGAACCTCAATATTATCATCAAGCAGTGTCGTTTGAACATTGGAGAGATGCTATGACTGCCGAGTTGAAAGCTATGGAGACTAATAGAACCTGGTCGGTTGTACCATTACCCAAAGGAAAGCATTCAATTGGCTGCAAGTTGATCTCCAAGATCAAACACAAAGCAAATGGGTCCATTGAACGTTACAAGGCTCGTCTTGTAGCCAAAGGTTACACACAACCAGAAGGGATAGATTACATTGAAACCTTTTCCCCCGTGGCAAAGTTGGTAACCATTAAAGTTTTATTAACTCTAGTTGTCTCTTTTCAATGGCCCTTGGTTCAATTAGATGTAAACAATGCTTTTCTTCACGGCGACCTGTTTGAGGAAGTATATATGGATTTGCCACTTGGATACAAACATGGTATTACTTCTTCCCAAAGTGATCGCCTAGACAGGGAATTTTCTTGCCTGCATCTAACTCCCTTTAGATACGTGCCTTTGGCTGATGCCGATTGGGCATCATGTCCTGAATCCAGAAAATCTACCACTGGATTTTGTATATTTTTGGGAGATGATTTAGTTTCTTGGAAATCTAAGAAACAGAACACAGTATTGCGTTCCTCAGCTAAAGCTGAATACCTAGCCTTAGCAGCTGTGTCTTTGATCTCTCTTATAACAAATTTACTCAGAGAAATGATCAGAACACTGGTTGTCAACGGCAAAGAGTCTTGGTACTCTGTCCATATCAACTGCGGTGGGAATGAAATAATCAGTGGAACGACTAAATTTGATGGAGACACAAATCCTGGCACATCTTCATTTTTTTTTCAAGAACGTGGAGCAAATTGGGGATTTAGCAACACTGGTAGTTTTATGGACAATAATCTCGAAGCAGACTACTTTATTGCACGAAATTCATCTGCTCTCTCAATGCCAAATCCTGAATTGTACACGAGGGCACGCATTTCTCCCATCTCTCTTAGTTATTATGCATATTGCATGGGTAGTGGAAACTATACAGTAAGCCTCCATTTTGCTGAGATAGTGTTTACTAATAACATGTCATACAAAAGCCTTGGTAGGCGCGTATTTGATGTCTACATTCAGGGAAAGCTGGAGTTGAAGGATTTTAATATTGCAGATGCAGCGGGGGGTGTTGGCAAACCTATTGTAAAGAACTTCACTGTTTCTGTTACTGATGGTACTATAGAGATCCGCCTATTCTGGGCTGGGAAGGGGACATATGCAATCCCTGTTAGAGGAGTTTATGGTCCTCTAATTTCAGCCATTTCTATTGATCCTGACTTTGTACCACCATCAGAAGGTGGAAGTGGCATATCTGCCGGTGCAGTGGTTGGAATTGTGGCTGCTGTGGTCTTTATTATCATCTCAGTTCTTGGAGTCTTGTGGTGGAGAGGTTGTTTAAGAAAGAAAAGCACACTAGAACAAGAGTTGAAGGGTCTAAATCTAGGAGCATCTTCATTTTCATTAAGGCAGATCAGAGCTGCCACTAACAACTTTGATGTTGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTTCAAGGGTGTTCTTGCGGATGATACCGCAATTGCAGTGAAACAACTTTCTTCAAAATCAAAGCAAGGAAATCGTGAATTTTTGAATGAGATAGGCATGATATCAGCATTGCAGCATCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAAATCAACTTTTGCTAATATATGAGTATATGGAAAATAATAGCCTTGCTCGTGCCTTATTCGGACCTGAAGAATGTCAATTGAAATTGGATTGGATAACTAGGCACAAGATATGTGTTGGTATAGCCAGAGGTTTAGCATACCTTCACGAGGAGTCAAGACTTAAAATCGTTCATCGAGACATCAAAGCTACCAATGTTCTACTTGATAAAGACCTCAACCCCAAGATTTCTGACTTTGGTTTGGCCAAGCTCGATGAAGAAGAAAATACACACATCAGCACCCGGATTGCTGGAACCTATGGGTATATGGCACCAGAATATGCCATGCGAGGCCACTTAACTGACAAAGCAGATGTTTATAGCTTTGGTATCGTGGCATTGGAAATAGTCAGTGGTCGAAGCAACACAGTTTTCCGAACCAAGGATGATTGCTTTTACCTTCTTGACCATGTGAGTGAATTCCATCTTTTACTCCTTATGGTTATCTATTTTGTTCTATAA 5142 43.12 MKKVTGGGVDGMGGVDGMGGGYDSMGGGDKGKEGERNERGVFRANWSSSSFTSGLLLQSHRRPPAAARRRPVSFFVLFISLSLTVSFSLTVPLSLTAFLKPFPARSRLGFELDGRDLNRGEIYLLELEIEENEEDGGRSTCRRRIDARERERAGSARSRGYRRELWVFRLETRLGSRSVRVAGVGIATVAGVGLVAVAGVVPSLFRFFFKKEKQKYWEKKKREEEENKLSKKKKEVAGGDGRPPANGGRRWPTAADDRVTRKMKIRSPKGAEPSSDLTRNYLSGPIPKEWGSTKLVIISLLGNRLTGPIPKEIGNISTLTQLVLEMNNFSGTIPPELGNLTSLSRLLLTSNNFYGELPPSLAKITSLTDFRITDNNFTGPIPKFIQNWTNLQRILIQASGLSGPIPSEIGLLTELTDVRISDLNGGSSSFPPLADLTKSKTLILRSCNIIGELPDNLDGLKELVTLDFSFNKITGPILGRFRELTKLDSIEFFAVFPIFLQSISFILLQWREILLITLIQFLLLQRTKLLSNLPINLLSICTRYQRKNRSRVFQLRREISNLSQDQQTVTQYFAKLKTLWNELVSYRPSCSCGRCNCGGVKEFIQYFQTEHVMRASIVPVTSNEVNAAALLAKTSQKGSHHFFASACQTESNSATLPGLSAEQCQGLLTMLQSHLAAVKVDSESTSAVNSQYQGLLTMLQSHLAAVKVDSESTSAVNSHVAVDDFSRYIWTFLMKSKSDALKIVPQFFVSYPPIFSCGVPPTKLYRGKEASTSPKCCTLITLPVQNTYHLLELKFHPRAIPAVFVGYPQGTKGYKLYDIQNKRFFVSRNVIFHENIFPFHQTTLQGDIVDLFPNLVLPKSFNYDGIPSVPTLHVNVPNPSHDLATLTNCDPAQISASESSESNEASNIERPSNVEVSLNRPRRSTQKTKQPSYLKDFHCSLLETNTCLPTSNKFPLQKYLSYEQLSPQYKKFVLNISTSYEPQYYHQAVSFEHWRDAMTAELKAMETNRTWSVVPLPKGKHSIGCKLISKIKHKANGSIERYKARLVAKGYTQPEGIDYIETFSPVAKLVTIKVLLTLVVSFQWPLVQLDVNNAFLHGDLFEEVYMDLPLGYKHGITSSQSDRLDREFSCLHLTPFRYVPLADADWASCPESRKSTTGFCIFLGDDLVSWKSKKQNTVLRSSAKAEYLALAAVSLISLITNLLREMIRTLVVNGKESWYSVHINCGGNEIISGTTKFDGDTNPGTSSFFFQERGANWGFSNTGSFMDNNLEADYFIARNSSALSMPNPELYTRARISPISLSYYAYCMGSGNYTVSLHFAEIVFTNNMSYKSLGRRVFDVYIQGKLELKDFNIADAAGGVGKPIVKNFTVSVTDGTIEIRLFWAGKGTYAIPVRGVYGPLISAISIDPDFVPPSEGGSGISAGAVVGIVAAVVFIIISVLGVLWWRGCLRKKSTLEQELKGLNLGASSFSLRQIRAATNNFDVANKIGEGGFGPVFKGVLADDTAIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLYGCCIEGNQLLLIYEYMENNSLARALFGPEECQLKLDWITRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNTVFRTKDDCFYLLDHVSEFHLLLLMVIYFVL 1713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9229236 9244383 - Lag0037793.1 Lac2g1155 598419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1155 1713 FunFam Lectin-domain containing receptor kinase A4.3 1557 1705 - -
Lac2g1155 1713 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 1450 1556 - -
Lac2g1155 1713 SUPERFAMILY Protein kinase-like (PK-like) 1466 1695 IPR011009 -
Lac2g1155 1713 Gene3D Phosphorylase Kinase; domain 1 1447 1556 - -
Lac2g1155 1713 ProSiteProfiles Protein kinase domain profile. 1481 1713 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1155 1713 MobiDBLite consensus disorder prediction 220 278 - -
Lac2g1155 1713 Pfam Leucine Rich Repeat 319 340 IPR001611 GO:0005515(InterPro)
Lac2g1155 1713 Gene3D - 1218 1408 - -
Lac2g1155 1713 FunFam Leucine-rich repeat receptor protein kinase EMS1 273 358 - -
Lac2g1155 1713 Gene3D Transferase(Phosphotransferase) domain 1 1557 1704 - -
Lac2g1155 1713 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1218 1409 - -
Lac2g1155 1713 Pfam Protein tyrosine and serine/threonine kinase 1483 1680 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1155 1713 CDD RNase_HI_RT_Ty1 1143 1206 - -
Lac2g1155 1713 SMART serkin_6 1481 1711 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1155 1713 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1238 1686 IPR051824 -
Lac2g1155 1713 Gene3D Ribonuclease Inhibitor 272 495 IPR032675 -
Lac2g1155 1713 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 359 424 - -
Lac2g1155 1713 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 1008 1132 IPR013103 -
Lac2g1155 1713 MobiDBLite consensus disorder prediction 1 35 - -
Lac2g1155 1713 SUPERFAMILY L domain-like 276 491 - -
Lac2g1155 1713 MobiDBLite consensus disorder prediction 254 269 - -
Lac2g1155 1713 MobiDBLite consensus disorder prediction 894 931 - -
Lac2g1155 1713 MobiDBLite consensus disorder prediction 220 239 - -
Lac2g1155 1713 Pfam Malectin domain 1220 1404 IPR021720 -
Lac2g1155 1713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1603 1615 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g0339 Lac-Chr1:7351277 Lac2g1155 Lac-Chr2:9229236 8.20E-46 dispersed
Lac2g1155 Lac-Chr2:9229236 Lac5g2414 Lac-Chr5:42790269 3.30E-168 dispersed
Lac2g1663 Lac-Chr2:14964376 Lac2g1155 Lac-Chr2:9229236 6.80E-47 dispersed
Lac2g1155 Lac-Chr2:9229236 Lac2g1158 Lac-Chr2:9264824 1.20E-08 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86010 PF07714 PK_Tyr_Ser-Thr 2.50E-46 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1155 - - - 0.0