Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1158 ATGTGGTTGGCTCGATTTCTCACCGTCGTTTTTCTGATATCTCTCTGCTTCATAAGCCTCGCTTCCGGCGCCGCTCGGCTGCCGGACGACGAAGTTGAGGCGTTGAGGGAGATCGGAAAGACATTGGGGAAGACGGACTGGAATTTCACGGCCGATCCATGCGGCGGTTTGAGTAGCGGTTGGATATCGAGTTCTGCACAGTTCGACCCAAGTTTTTCTAATAACGTCACCTGCAACTGCACGTTTCAGAACAATACAGTCTGTCACGTCACTAACATTCTTCTAAAGGCGCAGAGCCTTCAAGGTACTCTGCCACCGCAAATAGTGAGGTTGCCTTTCCTGCAGGAACTTGATCTCACCCGCAACTATCTCAACGGCTCAATTCCTCCAGAATGGGGTTCCACCAACCTTGTCAAAATTTCCCTTCTTGGAAATCGATTGACTGGCCCAATCCCAAAAGAGATTGGAAACATCAGCACTCTTGTAGAGTTGGTCCTAGAAATGAATCATTTATCTGGAAGTGTACCTCCGGAACTTGGAAATTTGTCCAGCTTATCAAGATTGCTTCTAACCTCAAACAACTTTTCTGGGGAGCTCCCACCCTCACTGGCAAGGATAGCCTCATTGGCGGACTTTCGAATTAGTGATAATCATTTCACAGGGCCAATCCCTACATTTATTCAGAATTGGACGAATCTTGGAAAAGTGGCTATTCAGGCAAGCGGGTTGAGTGGGCCAATTCCCTCTGAAATTGGACTTTTGACAACATTAACTGATGTGAGAATCAGTGACTTGAATGGAGGTTCATCACCCTTTCCACCCCTTAATACTTTGACAAAATTGAAAGTCCTGATATTGAGGAATTGCAATATAACAGGGGAGTTGCCCAAAAATCTTGATGCGTTGACAGCATTGAAAACCTTAGACTTTAGCTTCAACAAAATTACTGGACAAATACCTGCCAGCTTTGAAGCTTTGAAAAAAGTGGATAGCATATATTTAGCTGGAAACATGATAAATGGATCAGTGCCCACTTGGATGCTTCAGCAAGGAGAAAGCATTGATCTCTCTTATAACAAATTTACTCAGAGAAATGGTCAGAACAATGGTTGTCAAACACGAAATTTAAACCTGTTTGCAAGCTCTTCACAGGACAATAATAATTCTGGAACAGTTTCATGTTTAGCGAACACTTGCGGAAAAACTTCGTACTCTCTCCATATCAACTGCGGTGGAAAGGAAGAATTAATTAATGGAACAACCAAATTTGATGGAGACACAAACACTGGAAAATCATCATTGTTTTTTCAAGGTGGAGCAAATTGGGGATTTAGCAACACTGGTAGTTTTATGGATGATGATCGCACAACAGATGACTTTATTGCATTAAATTCATCTGTTCTCTCAATACCGAATCCTGAATTGTACACGAGGGCACGCATTTCTCCAATCTCTCTTACTTATTATGCATATTGCATGGGTACTGGAAACTACACAGTAAGCCTCCATTTTGCTGAGATATCATTTACTAATGACAAATCATACAGAAGCCTTGGCAGACGCTTATTTGATGTCTATATTCAGGGAAAGCTGGAGTTGAAAGATTTTAATATTGCAGATGCAGCAGGTGGTGCTGGCAAACCTTTTGTAAAGAAATTTACTGTTCCTGTGACTGATGGTACTATAGAGATCCGCCTATTTTGGGCTGGGAAGGGGACAAATGCAATCCCTGTGAGAGGAGTTTACGGTCCTTTAATTTCTGCCATTTCTGTTGATCCTGACTTTGTGCCACCATCGGAAGGTGGAAATGCCATATCTGCCGGCACCGTGGTTGGAATTGTGGCTGCTGTGGTCTTTTTTATCATCTTGGTTCTTGGAGTCTTGTGGTGGAGAGGTTGCTTTAGAAAGAAAAGCACACTAGAACAAGAGTTGAAGGGTCTAGATCTCGGAACAGGTTCATTTTCATTAAGACAAATCAGAGCTGCCACTAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGCGGTTTTGGTCCAGTTTACAAGGGTGTTCTTGCAGATGGCACTGTAATTGCAGTGAAGCAACTTTCTTCAAAATCAAAGCAAGGAAATCGTGAATTTGTAAATGAGATAGGCATGATATCTGCATTGCAACACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAAATCAACTTTTACTAATTTATGAGTATTTGGAAAATAATAGCCTTGCTCGTGCCTTATTCGGACCTGAAGAACATCAAATGAAATTGGATTGGCCAACTAGGCACAAGATTTGTGTCGGTATAGCCAGAGGTTTAGCATACCTTCACGAAGAGTCGAGACTTAAGATCGTTCATCGAGACATCAAAGCTACCAATGTTCTGCTCGATAAAAATCTAAACCCCAAGATTTCTGACTTTGGTTTGGCCAAGTTGGATGAAGAAGAAAATACACACATAAGCACCCGGGTTGCTGGAACCTTTGGGTATATGGCACCAGAATACGCCATGCGAGGCTACTTAACTGACAAAGCAGATGTTTATAGCTTTGGGATCGTGGCGTTGGAAATAGTTAGTGGTCGAAGCAACACAAGTTTCCGAACCAAGGATGATTGCTTTTACCTTCTTGACCATGCTAATACTTTAAAAGAGAAAGACAGTTTAATCGAGCTTGTCGATCCACGGTTAGGCTCTGAATTCAACAAAAGAGAGGCGATGGCAATGATCAATATTGCTCTGCAATGCACGAACGTCATTGCTTCGGACAGACCTGCAATGTCATCAGTGGTGAGCATGCTGGAAGGGAAGGTTGCTGTGAAAGAGGTGGTTTCAGATCCTAGTGTCTCAAAACAGGATGTGAATGCAATGTGGAGCCAAATCTATCGCCAGAAAGGGCAAACAGGCGAGAGCCAGACGCAAAGTATGTCAATGGATGGACCATGGACTGGTTCTTCAACTACTGCCAGTGATCTCTATCCCATCAACATGGATTCTAAGTACTTGGAAAATAGGAACTAG 3030 42.71 MWLARFLTVVFLISLCFISLASGAARLPDDEVEALREIGKTLGKTDWNFTADPCGGLSSGWISSSAQFDPSFSNNVTCNCTFQNNTVCHVTNILLKAQSLQGTLPPQIVRLPFLQELDLTRNYLNGSIPPEWGSTNLVKISLLGNRLTGPIPKEIGNISTLVELVLEMNHLSGSVPPELGNLSSLSRLLLTSNNFSGELPPSLARIASLADFRISDNHFTGPIPTFIQNWTNLGKVAIQASGLSGPIPSEIGLLTTLTDVRISDLNGGSSPFPPLNTLTKLKVLILRNCNITGELPKNLDALTALKTLDFSFNKITGQIPASFEALKKVDSIYLAGNMINGSVPTWMLQQGESIDLSYNKFTQRNGQNNGCQTRNLNLFASSSQDNNNSGTVSCLANTCGKTSYSLHINCGGKEELINGTTKFDGDTNTGKSSLFFQGGANWGFSNTGSFMDDDRTTDDFIALNSSVLSIPNPELYTRARISPISLTYYAYCMGTGNYTVSLHFAEISFTNDKSYRSLGRRLFDVYIQGKLELKDFNIADAAGGAGKPFVKKFTVPVTDGTIEIRLFWAGKGTNAIPVRGVYGPLISAISVDPDFVPPSEGGNAISAGTVVGIVAAVVFFIILVLGVLWWRGCFRKKSTLEQELKGLDLGTGSFSLRQIRAATNNFDAANKIGEGGFGPVYKGVLADGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEEHQMKLDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEENTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNTSFRTKDDCFYLLDHANTLKEKDSLIELVDPRLGSEFNKREAMAMINIALQCTNVIASDRPAMSSVVSMLEGKVAVKEVVSDPSVSKQDVNAMWSQIYRQKGQTGESQTQSMSMDGPWTGSSTTASDLYPINMDSKYLENRN 1009
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9264824 9274842 - Lag0037796.1 Lac2g1158 598422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1158 1009 MobiDBLite consensus disorder prediction 968 994 - -
Lac2g1158 1009 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 273 364 - -
Lac2g1158 1009 Pfam Malectin domain 405 589 IPR021720 -
Lac2g1158 1009 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 953 IPR051824 -
Lac2g1158 1009 FunFam Putative LRR receptor-like serine/threonine-protein kinase 742 949 - -
Lac2g1158 1009 SUPERFAMILY Protein kinase-like (PK-like) 650 957 IPR011009 -
Lac2g1158 1009 Gene3D Phosphorylase Kinase; domain 1 633 741 - -
Lac2g1158 1009 Pfam Protein tyrosine and serine/threonine kinase 669 937 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1158 1009 Gene3D Ribonuclease Inhibitor 194 267 IPR032675 -
Lac2g1158 1009 Gene3D - 404 593 - -
Lac2g1158 1009 Gene3D Transferase(Phosphotransferase) domain 1 742 958 - -
Lac2g1158 1009 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 28 266 - -
Lac2g1158 1009 ProSiteProfiles Protein kinase domain profile. 666 952 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1158 1009 SUPERFAMILY L domain-like 80 362 - -
Lac2g1158 1009 Pfam Leucine rich repeat 280 339 IPR001611 GO:0005515(InterPro)
Lac2g1158 1009 SMART serkin_6 666 937 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1158 1009 CDD STKc_IRAK 672 939 - -
Lac2g1158 1009 Pfam Leucine Rich Repeat 114 133 IPR001611 GO:0005515(InterPro)
Lac2g1158 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1158 1009 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 594 - -
Lac2g1158 1009 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 741 - -
Lac2g1158 1009 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Lac2g1158 1009 Gene3D Ribonuclease Inhibitor 268 403 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0842 Lac-Chr12:8764084 Lac2g1158 Lac-Chr2:9264824 1.30E-228 dispersed
Lac2g1141 Lac-Chr2:9079483 Lac2g1158 Lac-Chr2:9264824 0.00E+00 dispersed
Lac2g1149 Lac-Chr2:9169844 Lac2g1158 Lac-Chr2:9264824 1.10E-299 dispersed
Lac2g1150 Lac-Chr2:9184255 Lac2g1158 Lac-Chr2:9264824 0.00E+00 dispersed
Lac2g1151 Lac-Chr2:9204393 Lac2g1158 Lac-Chr2:9264824 0.00E+00 dispersed
Lac2g1152 Lac-Chr2:9216780 Lac2g1158 Lac-Chr2:9264824 9.30E-50 dispersed
Lac2g1158 Lac-Chr2:9264824 Lac5g2414 Lac-Chr5:42790269 3.60E-207 dispersed
Lac2g1155 Lac-Chr2:9229236 Lac2g1158 Lac-Chr2:9264824 1.20E-08 proximal
Lac2g1158 Lac-Chr2:9264824 Lac2g1159 Lac-Chr2:9315876 3.70E-212 tandem
Lac10g0993 Lac-Chr10:7965531 Lac2g1158 Lac-Chr2:9264824 8.50E-225 transposed
Lac10g3206 Lac-Chr10:46198050 Lac2g1158 Lac-Chr2:9264824 2.90E-88 transposed
Lac1g2119 Lac-Chr1:42658159 Lac2g1158 Lac-Chr2:9264824 2.60E-75 transposed
Lac5g1091 Lac-Chr5:18042631 Lac2g1158 Lac-Chr2:9264824 2.40E-92 transposed
Lac10g0962 Lac-Chr10:7697711 Lac2g1158 Lac-Chr2:9264824 1.40E-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86011 PF07714 PK_Tyr_Ser-Thr 1.60E-48 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1158 - - - 0.0