Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1245 ATGTCTGACGTGGCGAGTATAGCAGAGGCAGTGGCAGCAAGGTTTAGTTCTTTGGAGCTTATTGGAAGAGGTTCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAGCTTAACAAAGAAGTTGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAGGATATTCAGAAGGAAATTTCTGTTTTGTCACAATGTCGATCGCCCTACATTACTGAGTACTATGGTTCTTATCTCCACCAGACGAAGCTATGGATAATAATGGAATATATGGCTGGTGGCTCTGTTGCAGATCTGCTGCAGTCTGGGCCACCGCTTGATGAAATGTCAATTGCATGCATTCTACGGGATTTGCTGCATGCAATTGATTATTTGCACACTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCGCCAGAGGTAATTCAGAATTCTGAAGGATACAATGAGAAGGCAGACATCTGGTCTCTTGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCGCCACTTGCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAATCCACCTCAGTTGGATGAACATTTTTCTCGCCCTATGAAAGAATTAGTGTCACTGTGTCTGAAGAAAATACCTGCTGAGAGACCCAGTGCCAAAGAGCTTCTGAAGCATCGATTCATTAAGAATGCCAGGAAGAGTCCTAGGCTTCTGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGAAGATGAAGATGCAGAAACACCAACTAATGGTTCTAGAGCTATGGGTGAAACATCGGATACTGTGAAAGTATCAAGAAATGTAAGGGAGGAAACTGTTCGTGCCAGCAACCAGAGTAAAACTCCAAAGAATGCTGGATGGGACTTTAGCATTGGGGGGCCAAATAGTACAGGTACTGTTCGAAGTGTAGTAAAACCACCTCAAATTAGGGAAAGAAAACCAGAAATTCCTTATGGTCAGGCTGCACCTAGTAGAGTTGCAGAGAGTGGTAACTGGCCGACTGCATCTGGAAATGCACCTCGTGACATAGCAGAAAATGCTAGAAATTCGTACAATATGGGGGATGCTAGTGAAGATGAAGAGTTATCTGTAAGTGGTTCAGGAACCATTGTGATCCGGTCTCCCAGGGGGTCTCACGGATCTACTCAATTTCAAAATGAAAGCAGTCCGTCTGAAAGTGCACAAGCATATTTTGAGGACACATCTTTTAGTGGTACTGTTGTTATGCGTGGTCAACGTGATGATTCGGACTCTCCTCGGACTCCAAGATCCAGATTGGGAACTCAAGAAAGGACTTCAAGTTTGTCTCCTGAAGATAGTGCATTAAACCTTGCGGAGGCAAAGGCTGCAATGCAAGCAGCATTGAAGAAAGCTAATGTAAGGGAAAGACCGGCTCTCAATAAACTCAATGACAGGAAGGAAAATAGAAGAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCGAGGCATTCTCGTGAATTCTTTGATGCACCAAGAGCATTGCCAAAACCATCTCCATCAATTGATGAAGAAGAAAGTGCAAAAATAGCATTGTCTTCTGCACCTTTATCGATTTTGTTTATGTCAACCTTGAAAGAGGTAGTTGCGGATGATTCGGAAGGATCACCTGCTCGTTCTGTAATTAATGCACTTATAAATATGGAACACCGAAAACCTGGATCATGTGAGGTTCTTGTTACCAAGTTGCTTCAGAAATTGGCCAGTTCCAATGATTCTTCACTGAAAGATTTACAAGACTTGGCAACTCGCATATTCTCCAAGGCAAAGACAGTTCCCGAAGATACTCAAAATGTCGCAGATTCTGATAGCAGCAAAAAGCAACCAAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCACGGGATCTCAGTCCAGCTTAA 2091 42.52 MSDVASIAEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIKNARKSPRLLERIRERPKYQIKEDEDAETPTNGSRAMGETSDTVKVSRNVREETVRASNQSKTPKNAGWDFSIGGPNSTGTVRSVVKPPQIRERKPEIPYGQAAPSRVAESGNWPTASGNAPRDIAENARNSYNMGDASEDEELSVSGSGTIVIRSPRGSHGSTQFQNESSPSESAQAYFEDTSFSGTVVMRGQRDDSDSPRTPRSRLGTQERTSSLSPEDSALNLAEAKAAMQAALKKANVRERPALNKLNDRKENRRTEQTVSSSDSSRHSREFFDAPRALPKPSPSIDEEESAKIALSSAPLSILFMSTLKEVVADDSEGSPARSVINALINMEHRKPGSCEVLVTKLLQKLASSNDSSLKDLQDLATRIFSKAKTVPEDTQNVADSDSSKKQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSPA 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10155119 10175197 - Lag0037883.1 Lac2g1245 598509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1245 696 Coils Coil 41 68 - -
Lac2g1245 696 Gene3D Transferase(Phosphotransferase) domain 1 12 303 - -
Lac2g1245 696 MobiDBLite consensus disorder prediction 320 352 - -
Lac2g1245 696 CDD STKc_MST3_like 14 287 - -
Lac2g1245 696 MobiDBLite consensus disorder prediction 510 529 - -
Lac2g1245 696 MobiDBLite consensus disorder prediction 419 444 - -
Lac2g1245 696 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1245 696 MobiDBLite consensus disorder prediction 648 672 - -
Lac2g1245 696 MobiDBLite consensus disorder prediction 456 487 - -
Lac2g1245 696 MobiDBLite consensus disorder prediction 278 391 - -
Lac2g1245 696 SUPERFAMILY Protein kinase-like (PK-like) 13 319 IPR011009 -
Lac2g1245 696 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1245 696 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524(InterPro)
Lac2g1245 696 SMART serkin_6 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1245 696 MobiDBLite consensus disorder prediction 506 557 - -
Lac2g1245 696 MobiDBLite consensus disorder prediction 471 487 - -
Lac2g1245 696 FunFam serine/threonine-protein kinase dst1 isoform X1 12 302 - -
Lac2g1245 696 MobiDBLite consensus disorder prediction 278 297 - -
Lac2g1245 696 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 13 661 IPR050629 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g2201 Lac-Chr12:39118102 Lac2g1245 Lac-Chr2:10155119 1.30E-19 dispersed
Lac13g0383 Lac-Chr13:2705705 Lac2g1245 Lac-Chr2:10155119 3.60E-70 dispersed
Lac2g1245 Lac-Chr2:10155119 Lac8g2588 Lac-Chr8:43528216 1.00E-56 dispersed
Lac2g1245 Lac-Chr2:10155119 Lac11g0043 Lac-Chr11:370305 1.00E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86017 PF00069 Pkinase 6.40E-68 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1245 K08838 - csv:101214412 1234.17