Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1250 ATGAAGGAAAAAGTTGGGCTGGGTTCGTCGGATCCAGACTCTGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACGCATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATGTGGTTGCAGAGTTTAAGCAAGTGGATCATCATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATGCTATCCCTGATTATTTACAGTCGCATTTATTTTCTAATATAATAAATGAGCCCGATTTCTGGGTCGATCCAAAGAATGCAATCAGGAAAGCATACAGGGAAACTGACACTTACATTTTAGAGAAGGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACAGCCATATTGATCGACTGTAAGAAACTAGTAGTGGGCAATGTGGGGGATTCCCGTGCAGTTATCTGTAAGAAGGGTAAGGCCAGTCAATTATCAGTCGATCATGAGCCGAGCGCTGAAAGAAAAATCATCGAGGACAGAGGTGGTTTTGTAACAAGCTTTCCTGGTGATGTTCCACGTGTTGATGGGCAGTTGGCCGTTGCAAGGGCGTTTGGTGATAGGAGCTTGAAGAAACACTTGAGCTCAGAGCCTGATGTGGTAGAGGAGACGATAGATGACGAGACCGAGTTTGTTATCTTGGCAAGCGATGGATTGTGGAAGGTGATGTCGAACGAAGAAGCCGTAGAGTCTATCAGGCAAATAAAAGACGCTCATGCAGCTGCCAAGCATTTGACAGAGGAGGCTCTCAAGAGGAAGAGCAAAGATGATATTTCTTGTATAGTTGTGAGATTTCACTGA 831 44.16 MKEKVGLGSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKQVDHHHHELGLFAIFDGHLSNAIPDYLQSHLFSNIINEPDFWVDPKNAIRKAYRETDTYILEKAVDFSHGGSTAVTAILIDCKKLVVGNVGDSRAVICKKGKASQLSVDHEPSAERKIIEDRGGFVTSFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPDVVEETIDDETEFVILASDGLWKVMSNEEAVESIRQIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10223345 10226079 + Lag0037888.1 Lac2g1250 598514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1250 276 FunFam Probable protein phosphatase 2C 39 16 276 - -
Lac2g1250 276 MobiDBLite consensus disorder prediction 1 22 - -
Lac2g1250 276 ProSiteProfiles PPM-type phosphatase domain profile. 26 275 IPR001932 -
Lac2g1250 276 Pfam Protein phosphatase 2C 37 268 IPR001932 -
Lac2g1250 276 SMART PP2C_4 22 273 IPR001932 -
Lac2g1250 276 SUPERFAMILY PP2C-like 22 276 IPR036457 -
Lac2g1250 276 PANTHER PROTEIN PHOSPHATASE 22 273 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lac2g1250 276 CDD PP2Cc 34 275 IPR001932 -
Lac2g1250 276 Gene3D - 9 276 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3597 Lac-Chr1:55182928 Lac2g1250 Lac-Chr2:10223345 5.90E-83 dispersed
Lac2g1250 Lac-Chr2:10223345 Lac5g2701 Lac-Chr5:45472452 7.30E-78 dispersed
Lac2g1250 Lac-Chr2:10223345 Lac2g0725 Lac-Chr2:5585682 9.50E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1250 K17506 - csv:101215129 485.337