Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1269 ATGTCACCGGCGACCGGCGGCGGCAGCGGGCGGTGGCCGCCGGTCGCCGGAGTTAGGAAGAAGAAGAAGGAAGATGAAGGAGATGGAGAAGATGGAGAAAAAGAAAGAGAAGAAAGAGGGTGGGAGAAAAAGAAAGAGAAGAAAGAGGGTAAGGAGCTTGAAGGGCAAGAGGAAGACTTGGAGCTCCCATTATTTGACTTATCAACAATATCAAATGCCACAGAAAAATTTTCAAACTCTAACAAGCTTGGAGAAGGCGGTTTCGGCGCAGTTTTCTGGGGTAGACTTGAAAATGGACAAGAGATTGCTGTAAAGAGGCTTTCTTGCTATTCAAAACAAGGTTCTAATGAATTCAAGAATGAAGTAGTACTTATAACCAAACTTCAACATCGAAATCTGGTAAAGCTTTTGGGTTGCTGCATCCAAGAGGAAGAAAAAATGTTGATTTATGAATACATGCCTAATAACAGCTTGGACTCCTTCATATTTGATTCTACTAGATCAAAACTTTTAGATTGGTCGAAGCGGTTCAATATCATATGTGGAATAGCCAGAGGAATTCTTTATCTTCACCAAGATTCTAGATTGAGGATTATACATAGAGATCTCAAACCAAGCAATGTCTTGCTTGATGTTGATATGAACCCAAAAATCTCAGATTTTGGAATGGCTAGAACTTTTACTGGGAATCAAATAGAAGGAAATACTAGGAGAGTGGTTGGAACATAG 729 40.6 MSPATGGGSGRWPPVAGVRKKKKEDEGDGEDGEKEREERGWEKKKEKKEGKELEGQEEDLELPLFDLSTISNATEKFSNSNKLGEGGFGAVFWGRLENGQEIAVKRLSCYSKQGSNEFKNEVVLITKLQHRNLVKLLGCCIQEEEKMLIYEYMPNNSLDSFIFDSTRSKLLDWSKRFNIICGIARGILYLHQDSRLRIIHRDLKPSNVLLDVDMNPKISDFGMARTFTGNQIEGNTRRVVGT 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10479681 10482769 + Lag0037907.1 Lac2g1269 598533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1269 242 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 43 242 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Lac2g1269 242 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524(InterPro)
Lac2g1269 242 ProSiteProfiles Protein kinase domain profile. 77 242 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1269 242 Gene3D Phosphorylase Kinase; domain 1 36 152 - -
Lac2g1269 242 Pfam Protein tyrosine and serine/threonine kinase 80 229 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1269 242 SUPERFAMILY Protein kinase-like (PK-like) 61 242 IPR011009 -
Lac2g1269 242 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1269 242 MobiDBLite consensus disorder prediction 1 56 - -
Lac2g1269 242 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 153 242 - -
Lac2g1269 242 MobiDBLite consensus disorder prediction 17 56 - -
Lac2g1269 242 SMART serkin_6 77 240 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1269 242 Gene3D Transferase(Phosphotransferase) domain 1 153 242 - -
Lac2g1269 242 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 41 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1269 Lac-Chr2:10479681 Lac2g1333 Lac-Chr2:11174458 5.20E-104 dispersed
Lac2g1269 Lac-Chr2:10479681 Lac2g1328 Lac-Chr2:11106976 1.70E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86018 PF07714 PK_Tyr_Ser-Thr 5.90E-34 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1269 - - - 0.0