Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1312 ATGATGTTATCCGCATCGCCTTCGACGATAGCTCGGAGCTCACTCGAGGAAATGCTTGATTCCCTTCGACGAAGGGATGAGATTGATAAGCCTAAAGACTTACCGCCTGCATTGCCGTCTCGTCCCACTTCGAATGCTCGGATTCCTCCGGTGAGACGGGCTTTACCGGTCAATTTCAGGGTTAATGATGATGGTTCCCCAGAGTGCTCTATCAAGGGCTGTAATGGAAGGGAAGATGCAATGAGGAAGGAGAATGGTTTCGGTAACTTTGCAGTCAAGAGAATGAAGAGAGATGAAAACGAGGAATCGCCTTACATGTTAGCTTCAGAAAATGATAATAAGGATCAAGTGAATGACTTGAATGGTGCTTTAATGTCAAATATTCAAGGGTCTCACTGGGAGGACAATGTCAGTTATTTCCTTCACAAGAAACTTCGTGTTTGGTGCCAACTTCCAAATGGACAATGGGAGTTAGGAACTATACAGTCAAGCACTGGTGCGGATGCATCTGTCTTGCTCTCAAACAAAAAGGTTATTAAAGTTTCGACTGTAGATCTTTTACCTGCTAATCCAGATATAGTGGAGGGGGTTGATGATCTTGTGCAGCTTGGTTATTTGAACGAGCCTTCAGTTATTCACAGTCTCCAGCGAAGATTCTCTCGGGATAAAATTTATAGTAATGCAGGGTCAGTTTTGATTGCTGTCAACCCGTTGAAAGACACCAAACAGTATGGGAATGAAATTGTTACAGCCTATAGACAAAGAGTCATAAACAGCCCTCATGTTTATGCTACAGCAAATGCTGCCTATTCTGGCATGATGCAAGATGAAGTTAATCAATCGATTATCATCAGTGGCGAAAGTGGAGCAGGGAAAACTGAGACGGCAAAAGTTGCACTTCAGTACTTGACTGCTCTTGGTGGTGGCAGTGGCATAGATGATAGAATCCCACGGGCAAATGTTATACTGGAAGCATTTGGGAATGCTAAAACCTCCAGGAACAACAATGCCAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATCTGGTGCTGTAATCCAGACTTTTCTGTTGGAAAAGTCAAGAGTTGTTCAGCTGGTCAATGGTGAGAGATCATTCCATGTCTTCTATCAACTTTGTGCTGGAGCACCATCTACACTTAAAGAGAAATTGAATATCAGAGTGGCCAGTGAGTACAGTTATCTCAATCACAGTGAATGCCTGGTGATTGGTGGTGTGGATGATGCACGGAAATTTCATACTCTTGTGGAAGCCCTAGATACACTTCAATTCACAAAGGAAGATCAAGAGCATGCATTTGGTTTGCTTGCTGCAGTTTTGTGGATAGGAAACATCACGTTTCAAACAATTGATAGTGAAAATCATGTGGAGGTCATGGCTAATGAAGCGGTTGCAAATGCTGCCAAGCTGATGGGTTGCAGTGCTAATGAGCTTAAGTTAGTTTTGTCAACCCACAAAGAACAATCTGGCAGGGATAGTGCTAAAAAATTGACATTACGACAGGCAACCGATACAAGAGATGCACTGGCAAAGTTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAAGTCACTTAAACCAGGAAGGGAGCATTCTGGAAGATCCATAAATATCCTCGACATCTATGGGTTTGAGTCATTTAAGAAGAATGGCTTCGAACAATTTTGTATCAATTATGCAAACGAGAGACTGCAGCAGCATTTTATGCGACATCTATTCAAACTTCAGCAGGAGGACTATGAATTTAACGGGGTTGATGGCACAAAAGTCAACTTTGAAGACAATCAAGAGTGTTTGAATCTTATTGAGAAGAGGTCTCTAGGAGTACTAGCTTTGCTGGACGAAGAGTTAACTTTTCCTAAGGCTACAGATCTGACATTTGCTAATAAACTTAAGCAACACTTTAAATCTCATCCTCGCTTTAAAGCGGAAAGAGGTAGGGCTTTTGGTGTTCGCCATTATGCTGGAGAGGTTGTATACGATACAAATGGGTTTTTGGAGAAGAATAGAGATTTGCTGCATTCAGACTCCATCCAACTCTTTTCATCATGTACTTGCAAGCTATTGCAATTATTTGCCTCCAAAATCATTAACCATTCCCACAAACCTACAGTTTCAATGGGCTCTACAGAAGCAGTAGAATCCCTTGAGCCAGGTCTTGGTACCAAGTACAAGGTTCTACTATTTGACCTATTTCATAAATTGGAAAGCACCAGCCATCACTTCATTTGTTGCATAAGACCGAACAGAAATCAAGTTTGTGGCTTGTTTGAGGATGACCTTGTTTTACAACAGCTTAGGTACTGTGGAATTTTGGAGGTTGTTAGGATTTCAAGATCTGGATATCCTATCAGAATGACGCATCAAGAATTTGCTGGAAGGTATGGATTCTTCGTTAAAGAATCTGGTGTATCTCAAGATCCATTGAGTATATCAATTGCTGTTCTGCAACAATTTAATGTCCACCCCGAGATGTACCATGTTGGTTTTACCAAACTATTTTTCAGAACTGGGCAGATTAGGGCATTGGAGGAAAGGAGGACACAGTTTGTGCAAGGCATCCTAGGGGTTCAAAAGTACTTCCGTGGTTGCCATTCCCGTGGCCACTTCCATGAACTTAAGCAAGCCGCCGCTACCTTACAATCATTTATTCGTGGTGAAAATGCCAGAAGGAGATGTTCTGGTAAGGTGAAGAGGTTCTCATTTGTTGTGTACGCTTTCAATGTTCCTAAGAAGGTTTATGAACTGCAGGCAATCATACGATTACAGTCTGTAATACGTGGTTCGTTGGCTCGAAAGAGCATGTGTGATTCGAAGGGGTTTTCTCCTGTAAACAGAAAATCTAAACCAAACACAGGCAGGAGACTTTCAGAGGATAAATTTCAAGCCTTGCCTACAACTCTGACTGAGCTTCAAAAGAGGGTCCTTGCGGCAGAAGCAACCATAGAGAAAAAGGAAGAGGAAAATGCTGCACTGCGAGACCAAGTAAAGCAATTCGAGGCTAGGCGGTTAGAATATGAAGCCAAGATGAAGTCTATGGAGGATAAGTGGCAAAAGCAGATGGCATCTTTGCAAACGAGTCTTGCTGCTGCTAAAAAGACTCTTGCTACTGAAAATGTTGCCTGTCCACCTGGAAGAGTTGATGCTGGTAACTCACCACCTCGCTCTTATGATTCTGAGGATACAACGTCAATGGAATCTCGAACTCCTGGTGCTACGACACCTATAAAAGTTTCTGGAATTTCTGAAGCTGGAGCAGGCAAAGAAATGAATGGTACAGTTGCTGCAGTGAACAATCTTGTAAAGGAATTTGAACAGCGACGAAATGCATTTGATGATGATGCCAAAGCTTTAACTGAAGCAAAGGCACAGACAGGGGCTAATGTAAATCCAGGTGAAGAATACCGTAAAATTAAAGTCCGATTTGAAGCATGGAAGAAGGAGTACAAGGCAAGATTACGGGAAACAAAAGTTAAGTTGATTCAGTTCAGCCATGTGAATGGATGGAGAGCTCTTGAAAAGAAGGGAGAGAACATTGTCAAGTTGTCTTCTTTTGACAACTCGTGGGGTGTTGAAGCTGAACCTGACAAAGCCGAGAAGTGCATCGTGCGTTCGCAGGATGGAGGAGAGTGTTCAGAAGCATTGTGTATAGCTAAATAG 3711 42.28 MMLSASPSTIARSSLEEMLDSLRRRDEIDKPKDLPPALPSRPTSNARIPPVRRALPVNFRVNDDGSPECSIKGCNGREDAMRKENGFGNFAVKRMKRDENEESPYMLASENDNKDQVNDLNGALMSNIQGSHWEDNVSYFLHKKLRVWCQLPNGQWELGTIQSSTGADASVLLSNKKVIKVSTVDLLPANPDIVEGVDDLVQLGYLNEPSVIHSLQRRFSRDKIYSNAGSVLIAVNPLKDTKQYGNEIVTAYRQRVINSPHVYATANAAYSGMMQDEVNQSIIISGESGAGKTETAKVALQYLTALGGGSGIDDRIPRANVILEAFGNAKTSRNNNASRFGKLIEILFSRTGKISGAVIQTFLLEKSRVVQLVNGERSFHVFYQLCAGAPSTLKEKLNIRVASEYSYLNHSECLVIGGVDDARKFHTLVEALDTLQFTKEDQEHAFGLLAAVLWIGNITFQTIDSENHVEVMANEAVANAAKLMGCSANELKLVLSTHKEQSGRDSAKKLTLRQATDTRDALAKFIYASLFDWLVEQINKSLKPGREHSGRSINILDIYGFESFKKNGFEQFCINYANERLQQHFMRHLFKLQQEDYEFNGVDGTKVNFEDNQECLNLIEKRSLGVLALLDEELTFPKATDLTFANKLKQHFKSHPRFKAERGRAFGVRHYAGEVVYDTNGFLEKNRDLLHSDSIQLFSSCTCKLLQLFASKIINHSHKPTVSMGSTEAVESLEPGLGTKYKVLLFDLFHKLESTSHHFICCIRPNRNQVCGLFEDDLVLQQLRYCGILEVVRISRSGYPIRMTHQEFAGRYGFFVKESGVSQDPLSISIAVLQQFNVHPEMYHVGFTKLFFRTGQIRALEERRTQFVQGILGVQKYFRGCHSRGHFHELKQAAATLQSFIRGENARRRCSGKVKRFSFVVYAFNVPKKVYELQAIIRLQSVIRGSLARKSMCDSKGFSPVNRKSKPNTGRRLSEDKFQALPTTLTELQKRVLAAEATIEKKEEENAALRDQVKQFEARRLEYEAKMKSMEDKWQKQMASLQTSLAAAKKTLATENVACPPGRVDAGNSPPRSYDSEDTTSMESRTPGATTPIKVSGISEAGAGKEMNGTVAAVNNLVKEFEQRRNAFDDDAKALTEAKAQTGANVNPGEEYRKIKVRFEAWKKEYKARLRETKVKLIQFSHVNGWRALEKKGENIVKLSSFDNSWGVEAEPDKAEKCIVRSQDGGECSEALCIAK 1236
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 10928078 10937690 + Lag0037950.1 Lac2g1312 598576
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1312 1236 Gene3D - 377 433 - -
Lac2g1312 1236 ProSiteProfiles Myosin motor domain profile. 195 865 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lac2g1312 1236 ProSiteProfiles IQ motif profile. 890 918 - -
Lac2g1312 1236 MobiDBLite consensus disorder prediction 1072 1093 - -
Lac2g1312 1236 Gene3D - 564 755 - -
Lac2g1312 1236 Gene3D - 799 866 - -
Lac2g1312 1236 MobiDBLite consensus disorder prediction 1 15 - -
Lac2g1312 1236 Coils Coil 1118 1138 - -
Lac2g1312 1236 CDD MYSc_Myo8 209 853 IPR036022 -
Lac2g1312 1236 MobiDBLite consensus disorder prediction 1057 1094 - -
Lac2g1312 1236 Coils Coil 985 1033 - -
Lac2g1312 1236 Pfam Myosin head (motor domain) 197 853 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lac2g1312 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 911 IPR027417 -
Lac2g1312 1236 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 142 191 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lac2g1312 1236 FunFam Myosin heavy chain 377 433 - -
Lac2g1312 1236 Gene3D Kinesin motor domain 194 798 IPR036961 -
Lac2g1312 1236 SMART MYSc_2a 189 866 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lac2g1312 1236 PRINTS Myosin heavy chain signature 225 244 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lac2g1312 1236 PRINTS Myosin heavy chain signature 279 304 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lac2g1312 1236 PRINTS Myosin heavy chain signature 605 633 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lac2g1312 1236 PRINTS Myosin heavy chain signature 321 348 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lac2g1312 1236 PRINTS Myosin heavy chain signature 552 580 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lac2g1312 1236 SMART iq_5 866 888 IPR000048 GO:0005515(InterPro)
Lac2g1312 1236 SMART iq_5 889 911 IPR000048 GO:0005515(InterPro)
Lac2g1312 1236 SMART iq_5 931 953 IPR000048 GO:0005515(InterPro)
Lac2g1312 1236 MobiDBLite consensus disorder prediction 1 52 - -
Lac2g1312 1236 Gene3D - 871 916 - -
Lac2g1312 1236 Gene3D Myosin VI head, motor domain, U50 subdomain 434 541 - -
Lac2g1312 1236 ProSiteProfiles IQ motif profile. 932 960 - -
Lac2g1312 1236 Pfam IQ calmodulin-binding motif 934 951 IPR000048 GO:0005515(InterPro)
Lac2g1312 1236 Pfam IQ calmodulin-binding motif 892 910 IPR000048 GO:0005515(InterPro)
Lac2g1312 1236 PANTHER MYOSIN 146 1199 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Lac2g1312 1236 MobiDBLite consensus disorder prediction 17 34 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0849 Lac-Chr13:6846640 Lac2g1312 Lac-Chr2:10928078 2.40E-303 dispersed
Lac2g1312 Lac-Chr2:10928078 Lac7g0513 Lac-Chr7:4083896 1.10E-149 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1312 K10357 - csv:101210624 1947.94