Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1329 ATGGAATGTCACGTCAGAAATCAGAAGATGGTGTGCTTTTTACATGTTACGAGCGCTGGTGAAGATGAAGTAAAGCAATGTTGCAGTTCATATTTCTTATTGGAGTTAATTCATGTCACAAGCGGCGAGATTTGGTTTCTTAGGAATTCGGAGGCGTTTTGGGACGAACCAGGCGAAATCGGGGCGACCAGAGACAGCAGGGACCGAACGGAAGCGAGCGGACTCGGCCCCAAGGCCGAGGCCGACCATATGGGGCCAAGTTGGCCCGACCCTTTGGTCTGGTCTTCCACTGGGTCGGTTTCTTGGTCCTGTCTCTACCCGGTTGTCCCGGAGGACTGGAGGAGAATGCTTTGGAGAGGCAGAACCAAAATGACCAGACAACCAGTCAAGTCGTTGGCAAAACCGAACGAAGCCCAATGCAGGATGGCAAATTTTTCTCTGATATCCTTCGTTGCTGCAACAGTATTTTTATGTTCTTCTTTCAATCTCTCTGTAGCTGCTGATTTCTTAACAGCTTCTCAAAACCTCAGCAATGGCAACTCTTTGGTCTTGGAAAAAGGAATTTTCGAGCTGGGTTTCTTTCGTCCAGGAATTTCTAACAACCTTTACTTGGGAATTTGGTACAAAATCATCCCAATTCCCACTGTTGTTTGGGTCGCCAACAGAGAAACCCCGCTTGAAGATTCGTCCGGTATTCTGACAATAAATACCACAGCTAACAACATTGTTCTCATCCAGAACGATACTGTTGTTTGGTCAGCAAAGTCGTTAAAACCAGTGGAAAGTCCCAGGCTACAGCTCTTGGACACTGGAAATTTAGTCCTGAAAGATGGAAACTCGGAGGAGTTTTTGTGGCAAAGCTTCGATCATCCAACTGATACATTGTTGCCAGGAATGAAGCTGGGATGGGATTTTAAAAATGGCATGAACAGACGATTATCATCTTGGAAAAACTCAGACGACCCATCTCCTGGAACCTTGACCATGGAAATGGAGAATCATAGCTACCCAGAACTCGCCATGTGGAACGGTACCCAAGAGTTCGTGAGAACTGGACCTTGGAATGGGGTTCGGTTCAGCGCCAAATCCGCTCCTGGTCTCCCAATTTTGGTCTACCACTACGTGAATAATAAAGAAGAGCTTTATTTCAGCTACCAGCTCATTAACAACTCTTTGATTGGAAGAATGACGTTGAACCAATCGAGTTTCAGGAGAGAGGTCTTATTGTGGTCAGAAACTGAGAAAAACTGGAAGGTTTATGCTACTATACCGAGGGATGACTGTGACAGATACAACTCCTGTGGTGCCTTTGGGAACTGTGACATCGAAACTATGCGTGCTTGTCAATGTCTGAAAGGATTTCGGCCAAGGGTGCCGGAGAAATGGAATGTCATGGATTATACAGAAGGGTGTGTCAGAAATAAGCCTCTGAATTGCTCGGATGAAGTTGGCTTTGCGCAGTTACCAGGGCTGAAATTGCCCGACACTAAATTTTCCTGGGTTAATGAAAGCACGAGTTTAAATGAATGCAGGGAAAAGTGCTTGAGAAATTGTTCTTGTATGGCGTTTGCAAATACAAATATCAGAGGATCAGGTAGTGGTTGTGCCATTTGGCTTGGTGATCTTATTGATATTAAAGTGGTTTTAAAAGGTGGACAAGACTTATATAAAGAAGGCGAGTTCGGTTGTCATTGGCGTTATAGTTTCTGCTACTGTCCTTATAATTGCCGGCCTGCTTTTGGTTGTATTTTACATTATCAAAAGCAGGAAAATCCTCAAATTAAACCATATAAATCTGATGGAATCTCAACAGGTAAGGAACTTGAGGGGCAAGAGGAAGCCTTGGAGCTCCCATTATTTGACTTATCAACAATATCAAATGCCACAGACAATTTTTCAAACTCTAACAAGCTTGGAGAAGGTGGCTTCGGTGCAGTATTCCGGGGTAGACTCACAGATGGACAAGAAATTGCTGTAAAGAGGCTTTCCAACTATTCTAGACAAGGAACCAACGAATTCAAGAATGAAGTAATACTTATAGCCAAACTTCAGCATCGGAATCTTGTAAAGCTTCTGGGTTGCTGCATCCAAGAGGAAGAAAAAATGTTGATTTATGAATACATGCCTAATAAGAGCTTGGATTCCATCATATTTGATCCTAATGGAAGGAAACTCTTAGATTGGGCGAAACGATTCAATATCATATGTGGAATAGCTAGAGAGATTCTTTATCTTCATGAAGATTCTAGATTGAGGATTATACATAGAGATCTTAAACCAAGTAATGTCTTACTTGATATTGATTTGAATCCAAAAATCTCAGATTTTGGAATGGCTAGAACTTTTGTGGAGACCAGACGGAAGGAAGTACTAAAAGAGTCGTTGGAACATAGTAATGGATATATGGTGCCAGAGTATGCAATCGATGGACAATTTTCTATTAAGTTAGATGTATTTAGTTTCAGGATTTTATTGTTGGAGATTATAAGCGGAGAGAAAAATAGAGGATTTTATCGTCTAAACCATACTCTCAATCTTATTGGATATGCATGGAAGTTATGGAAGGAAGGAAGACCATTAGAATTGATCGACCCCTCCATCGGGGACTCATATGCTTTATCTGAAGTATTGCGGTGCATCCATGTTAGTCTTTTATGCTTGCAACAAAATCCCGATGATAGACCAATCATGTCAAATGTGATTCTAATGCTAAGTAGTGAGACTGTCTTAGCACAACCACAACAACCGATATATTACATGGAAAGAGATTCATTTAAAGAGGATTCTCTTTCGAGTAAGAATGAATCTTCTATCGCCAATGAATTAACTGTTACTCTTGTAGGGGCTAGATAA 2853 41.85 MECHVRNQKMVCFLHVTSAGEDEVKQCCSSYFLLELIHVTSGEIWFLRNSEAFWDEPGEIGATRDSRDRTEASGLGPKAEADHMGPSWPDPLVWSSTGSVSWSCLYPVVPEDWRRMLWRGRTKMTRQPVKSLAKPNEAQCRMANFSLISFVAATVFLCSSFNLSVAADFLTASQNLSNGNSLVLEKGIFELGFFRPGISNNLYLGIWYKIIPIPTVVWVANRETPLEDSSGILTINTTANNIVLIQNDTVVWSAKSLKPVESPRLQLLDTGNLVLKDGNSEEFLWQSFDHPTDTLLPGMKLGWDFKNGMNRRLSSWKNSDDPSPGTLTMEMENHSYPELAMWNGTQEFVRTGPWNGVRFSAKSAPGLPILVYHYVNNKEELYFSYQLINNSLIGRMTLNQSSFRREVLLWSETEKNWKVYATIPRDDCDRYNSCGAFGNCDIETMRACQCLKGFRPRVPEKWNVMDYTEGCVRNKPLNCSDEVGFAQLPGLKLPDTKFSWVNESTSLNECREKCLRNCSCMAFANTNIRGSGSGCAIWLGDLIDIKVVLKGGQDLYKEGEFGCHWRYSFCYCPYNCRPAFGCILHYQKQENPQIKPYKSDGISTGKELEGQEEALELPLFDLSTISNATDNFSNSNKLGEGGFGAVFRGRLTDGQEIAVKRLSNYSRQGTNEFKNEVILIAKLQHRNLVKLLGCCIQEEEKMLIYEYMPNKSLDSIIFDPNGRKLLDWAKRFNIICGIAREILYLHEDSRLRIIHRDLKPSNVLLDIDLNPKISDFGMARTFVETRRKEVLKESLEHSNGYMVPEYAIDGQFSIKLDVFSFRILLLEIISGEKNRGFYRLNHTLNLIGYAWKLWKEGRPLELIDPSIGDSYALSEVLRCIHVSLLCLQQNPDDRPIMSNVILMLSSETVLAQPQQPIYYMERDSFKEDSLSSKNESSIANELTVTLVGAR 950
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11118071 11122815 + Lag0037967.1 Lac2g1329 598593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1329 950 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 163 288 - -
Lac2g1329 950 MobiDBLite consensus disorder prediction 58 84 - -
Lac2g1329 950 Pfam S-locus glycoprotein domain 350 457 IPR000858 GO:0048544(InterPro)
Lac2g1329 950 Pfam Protein tyrosine and serine/threonine kinase 635 843 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1329 950 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 167 916 - -
Lac2g1329 950 ProSitePatterns Protein kinases ATP-binding region signature. 638 660 IPR017441 GO:0005524(InterPro)
Lac2g1329 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 753 765 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1329 950 Gene3D Transferase(Phosphotransferase) domain 1 708 919 - -
Lac2g1329 950 ProSiteProfiles PAN/Apple domain profile. 479 563 IPR003609 -
Lac2g1329 950 Pfam D-mannose binding lectin 215 317 IPR001480 -
Lac2g1329 950 ProSiteProfiles Bulb-type lectin domain profile. 167 288 IPR001480 -
Lac2g1329 950 SMART serkin_6 632 902 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1329 950 SMART ntp_6 480 559 IPR003609 -
Lac2g1329 950 SUPERFAMILY Protein kinase-like (PK-like) 616 904 IPR011009 -
Lac2g1329 950 Gene3D Phosphorylase Kinase; domain 1 600 707 - -
Lac2g1329 950 SUPERFAMILY alpha-D-mannose-specific plant lectins 216 322 IPR036426 -
Lac2g1329 950 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 708 912 - -
Lac2g1329 950 Pfam PAN-like domain 479 545 IPR003609 -
Lac2g1329 950 ProSiteProfiles Protein kinase domain profile. 632 910 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1329 950 CDD PAN_AP_plant 476 556 - -
Lac2g1329 950 Gene3D Hepatocyte Growth Factor 476 570 - -
Lac2g1329 950 MobiDBLite consensus disorder prediction 58 76 - -
Lac2g1329 950 Gene3D - 162 289 IPR036426 -
Lac2g1329 950 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 707 - -
Lac2g1329 950 SMART blect_4 173 291 IPR001480 -
Lac2g1329 950 CDD B_lectin 176 291 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0779 Lac-Chr10:6135944 Lac2g1329 Lac-Chr2:11118071 9.20E-67 dispersed
Lac2g1329 Lac-Chr2:11118071 Lac5g1623 Lac-Chr5:33054586 1.00E-256 dispersed
Lac2g1332 Lac-Chr2:11140824 Lac2g1329 Lac-Chr2:11118071 1.80E-62 dispersed
Lac2g1329 Lac-Chr2:11118071 Lac2g1333 Lac-Chr2:11174458 8.10E-177 proximal
Lac2g1328 Lac-Chr2:11106976 Lac2g1329 Lac-Chr2:11118071 1.9e-312 tandem
Lac2g1329 Lac-Chr2:11118071 Lac2g1330 Lac-Chr2:11127507 3.30E-15 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86021 PF07714 PK_Tyr_Ser-Thr 2.70E-40 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1329 - - - 0.0