Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1333 ATGGCAACACCCTGGTCTCGGAAAAAGGATCTTTCGAGCTGGGTTTCTTCAGTCTTGGAAGGGTTTCGGCCAAGAGTGCCGGAGAAATGGAGTCTGATGAATTACACTGAAGGGTGTGTTAGAAATAGGCCTCTGAACTGCTCGGATCAAGTTGGTTTTGCTCAGTTTTCGGGAATGAAATTGTCTGACACTAAATTTTCTTGGGTCAACGAAAGCATGAGTTTAAGAGAATGCAAGGAGAAGTGCTTGAGAAATTGTTCTTGTGTGGGGTTTGCCAATACAAATATTAGTGGATCAGGCAGTGGTTGTGCCATTTGGCTTAGTGATCTTATTGATATGAAGGTGGTTCCAAGAGGTGGACAAAACTTATATGTTCGAATGCTCGTTTCCGAGTTAGAGACAAAGAAGACGAGTTCGGTTGTCATTGGCGCTTTAGTTTCATCTGCTGTCCTTATAGTTGCTGGTCTGCTCTTCGTTGGATTTTACATCATCAGAAGCAGGAAAAGCCTCCAAGGTAAGGAGATTGAAGGGCAAGAGGAAGACTTGGAGCTCCCATTATTTGACTTATCAACAATATCAAATGCCACAGACAATTTTTCAAACTCTAACAAGCTTGGAGAAGGCGGTTTCGGCGCAGTTTTCTGGGGTAGACTTGAAAATGGACAAGAGATTGCTGTAAAGAGGCTTTCTTGCTATTCAAAACAAGGTTCTAATGAATTCAAGAATGAAGTAGTACTTATAACCAAACTTCCACATCGAAATCTGGTAAAGCTTTTGGGTTGCTGCATCCAAGAGGAAGAAAAAATGTTGATTTATGAATACATGCCTAGTAACAGCTTGGACTCCTTCATATTTGATTCTACTAGATCAAAACTTTTAGATTGGTCGAAGCGGTTCAATATCATATGTGGAATAGCCAGAGGGATTCTTTATCTTCACCAAGATTCTAGATTGAGGATTATACATAGAGATCTCAAACCAAGCAATGTCTTGCTTGATGTTGATATGAACCCAAAAATCTCAGATTTTAGAATGGCTAGAACTTTTACTGGGAATCAAATAGAAGGAAATACTAGGAGAGTGGTTGGAACATACTTTGGCATTTTACTATTGGAGATTATAAGCGAAAAGAAAAATAAAGGGTTTTACCGTTCGGACCATGCACTTAATCTTATTGGACATGATGGAAAACCATCGGAATGGATTGACCCATCCATGGGAGACTCATATTCTTTGTCTGAAATATTGCGATGCATCCATGTTAGCCTTTTGTGCTTGCAACAACATCCTGAGGATCGACCAACCATGTCAAATGTGGTTCAAATGCTAAATAGTGAGAACTTCTCGATGCAACCGAAACAACCAGGATTCTACCTAGAAGGAGACTCAAGTAAAGTCGATTCTCTTCGAGACAAGAATGAGTTTTCTACCAATAATGAACTAACTATTACCTCTCGGGGCTAG 1464 40.16 MATPWSRKKDLSSWVSSVLEGFRPRVPEKWSLMNYTEGCVRNRPLNCSDQVGFAQFSGMKLSDTKFSWVNESMSLRECKEKCLRNCSCVGFANTNISGSGSGCAIWLSDLIDMKVVPRGGQNLYVRMLVSELETKKTSSVVIGALVSSAVLIVAGLLFVGFYIIRSRKSLQGKEIEGQEEDLELPLFDLSTISNATDNFSNSNKLGEGGFGAVFWGRLENGQEIAVKRLSCYSKQGSNEFKNEVVLITKLPHRNLVKLLGCCIQEEEKMLIYEYMPSNSLDSFIFDSTRSKLLDWSKRFNIICGIARGILYLHQDSRLRIIHRDLKPSNVLLDVDMNPKISDFRMARTFTGNQIEGNTRRVVGTYFGILLLEIISEKKNKGFYRSDHALNLIGHDGKPSEWIDPSMGDSYSLSEILRCIHVSLLCLQQHPEDRPTMSNVVQMLNSENFSMQPKQPGFYLEGDSSKVDSLRDKNEFSTNNELTITSRG 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11174458 11178130 - Lag0037971.1 Lac2g1333 598597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1333 487 SUPERFAMILY Protein kinase-like (PK-like) 183 443 IPR011009 -
Lac2g1333 487 ProSitePatterns Protein kinases ATP-binding region signature. 205 227 IPR017441 GO:0005524(InterPro)
Lac2g1333 487 Gene3D Transferase(Phosphotransferase) domain 1 275 365 - -
Lac2g1333 487 Gene3D Transferase(Phosphotransferase) domain 1 366 455 - -
Lac2g1333 487 SMART ntp_6 48 127 IPR003609 -
Lac2g1333 487 ProSiteProfiles Protein kinase domain profile. 199 487 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1333 487 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 164 274 - -
Lac2g1333 487 Pfam PAN-like domain 47 113 IPR003609 -
Lac2g1333 487 Pfam Protein tyrosine and serine/threonine kinase 202 351 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1333 487 Gene3D Phosphorylase Kinase; domain 1 162 274 - -
Lac2g1333 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g1333 487 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 275 366 - -
Lac2g1333 487 CDD PAN_AP_plant 44 126 - -
Lac2g1333 487 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 457 - -
Lac2g1333 487 SMART serkin_6 199 448 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g1333 487 MobiDBLite consensus disorder prediction 461 487 - -
Lac2g1333 487 ProSiteProfiles PAN/Apple domain profile. 47 128 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1269 Lac-Chr2:10479681 Lac2g1333 Lac-Chr2:11174458 5.20E-104 dispersed
Lac2g1333 Lac-Chr2:11174458 Lac5g1623 Lac-Chr5:33054586 1.30E-157 dispersed
Lac2g1329 Lac-Chr2:11118071 Lac2g1333 Lac-Chr2:11174458 8.10E-177 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86022 PF07714 PK_Tyr_Ser-Thr 3.90E-31 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1333 - - - 0.0