Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1349 ATGGACTCTCATCAACTGTTTGGATTTGGGGTCAATAGTGCAGCTGCAGGTCTTTCTTATACATCGTCTTATTCCTCTGTTCCATCTTTACCTAATAGTTTGCTTGGACCCTTGAAATTTAATCTGAGAAATTCCCCGGTTTCGCCGTCGCTTTTTTCGTCACATTTCGAATCGGATTCCTTTACGACGACGACTGTGAGTGATAGTCAGGATCAGAGGAACTCCCCTGAGAATCTCTCTGGACTTAGCCCTTCTTGTAATTCCTCGTTTGAAACGAATAGCTTTAATCAAATAGCCTCGTCGTATTTGGACCATTTTGAGGACGAGAGTCGACAAGTCTATTCGGGGTCGAATGCGTTTCTTTACGATGGATGCTCGACCGAGAACATAAGCTACGCGTTGAAACGATTGGAGAGTGCTCTGATGGGGCCTGATAATGAGGAAGTTGTGAGCAAGCCTGATGCTTCGTTTGGAGAGAGTAGCAGGCCACAGATGATGGGGCAGAGGTCCTACTCATGGAGCCAAGATCGACGTGGTGGGTCGTATCTTGTCCAGTCTCAGACGTCGCCGCCGGTGTCGAGAAGCCAGCAATCTGAAGCTGTTCACTTGGGGAAACGCCAAAAATCCATGGATGAATCGATGTTCCAGCAGGGAGGATTTCCATCGGATAATTTGAAGGAGTTGCTGATTGCTTGTGCAAAAGCTTTAGCTGAAAACAGGATGGAGGATTTTGATAACTTGGTTGCTACAGCAAGAGGTGCTGTGTCTATTAGCGGAGAACCGATCCAACGTCTCGGCGCTTACATGGTGGAAGGATTGGTGGCGAGGAAGGAGGAATCGGGGGCGAATATATACCGTGCTCTAAACTGTAGAGAGCCTGCAAGTAATGATTTGCTATCTTATATGCATATGCTATATGAAATCTGCCCCTACTTGAAGTTCGGTTACATGGCAGCGAACGGGGCGATCGCTGAAGCCTGCAGAAACGAAGACCGCATCCACATCATAGACTTCCAGATTACTCAGGGGACGCAATGGTTAACTCTTCTTCAGGCACTTGCAGCAAGGCCCAGTGGGGCTCCCCATGTGAGGATAACTGGTATCGACGACCCTGTTTCTAAATATGCCCGTGGCGATGGGTTGGAGGTCGTTGAGAGACGGTTGGCTGAAATCTCCAGGAAGTATGGAATACCAGTGGAGTTTCATGGAGTCCCCGTCTTCGCTCCAGACATCACGCGTGATATGCTCGACATCAGACCAGGGGAGGCTCTGGCTGTAAACTTCCCATTGCAACTTCATCATACCCCAGACGAGAGCGTCGACGTGAACAATCCACGCGACGGTCTGCTGAGAATGGTGAAGTCATTATCTCCAAAGGTAGTAACACTGGTAGAGCAAGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTGTGGAAACTTTAGATTACTACTTGGCAATCTTTGAGTCCATTGATGTCACTCTACCAAGGAACAACAAGAAGCGCATCAACGTGGAGCAACATTGTTTGGCGAAAGATATCGTCAATGTCATCGCTTGCGAAGGGAAGGAACGAGAAGAGCGCCACGAGCTCTTCGGCAAGTGGAAATCGAGGTTGACAATGGCAGGGTTCCGCCAGTTCCCGTTGAGCTCTTACGTCAACGCCGTCATCAGGAGCCTGCTCAGATGTTATTCAGAACATTACACTCTCGTCGAAAAAGATGGAGCAATGCTGCTGGGATGGAAAAACAGGAACCTGATATCTGCCTCGGCCTGGTACTAA 1788 48.49 MDSHQLFGFGVNSAAAGLSYTSSYSSVPSLPNSLLGPLKFNLRNSPVSPSLFSSHFESDSFTTTTVSDSQDQRNSPENLSGLSPSCNSSFETNSFNQIASSYLDHFEDESRQVYSGSNAFLYDGCSTENISYALKRLESALMGPDNEEVVSKPDASFGESSRPQMMGQRSYSWSQDRRGGSYLVQSQTSPPVSRSQQSEAVHLGKRQKSMDESMFQQGGFPSDNLKELLIACAKALAENRMEDFDNLVATARGAVSISGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPASNDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEVVERRLAEISRKYGIPVEFHGVPVFAPDITRDMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLPRNNKKRINVEQHCLAKDIVNVIACEGKEREERHELFGKWKSRLTMAGFRQFPLSSYVNAVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWY 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11330182 11331969 - Lag0037987.1 Lac2g1349 598613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1349 595 MobiDBLite consensus disorder prediction 63 84 - -
Lac2g1349 595 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 204 594 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Lac2g1349 595 MobiDBLite consensus disorder prediction 157 203 - -
Lac2g1349 595 ProSiteProfiles GRAS family profile. 216 595 IPR005202 -
Lac2g1349 595 MobiDBLite consensus disorder prediction 145 208 - -
Lac2g1349 595 Pfam GRAS domain family 225 594 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1349 Lac-Chr2:11330182 Lac9g1970 Lac-Chr9:39446838 6.90E-134 dispersed
Lac2g1349 Lac-Chr2:11330182 Lac3g0856 Lac-Chr3:6861724 2.20E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23504 PF03514 GRAS 2.30E-128 CL0063 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1349 K27748 - csv:101216606 1030.01