Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1354 ATGGGTGTTGCAAGAAGGAGATGTTTGGTTCTTCTTGTGATTCTCATCTGTGATTCTTTAGCAACTTGCTTGAAGGACCACGAGGAAGAGGAACTGATTCTGAGTCAACTAGCTGACCCAATTACTGGGGATGTCAACACAGAGATGGCTGAGCTGTTATTGGTTAAGTGCAACTTGGATTTGTTTCAGTTGAAGGAAGCTGTAGATGGTACTGACTCATGCTCTGAAGAAAGACCCGGAAGCACAAATGAAAATAATTTTGAATGTCGGATGCTGACCAAAGAAAAAACAAACAGAATGCTAGGTGCCATGCATCCACATATGAAGCAGTCTCTTTTAGATTGTTTAAGAAAGAATTTTCACGTCTCCGGGAAAGACTACAATTCTGAAGCTTGGTACACCAGATATCTGGAGTCATTGATTTTTATGCCTGGTAGTCTTAGAAGGAAGTTAAGTTCGAGATGGCTTCAAAGTGCTAAAGAAGCTTCGGCTCCTGAATCTTCACCCTCTTCTAAATCACCAAATTTTGATGATTCAAGTCAATCTGCTGATGGAAAGCCTTCAAGAAAAGCTTCTAGCACAAGTGGTCAAAAAGAAAAGAAATCTAATAATAAGCAAACAGTTGTCATTGCTGTTGTTGTAACAGCAACAGTGACTTTTATTATTGTAGCTCTGCTCTTTTTGTGCTTTAATAAGAGTGGCTCCAGAGTGAAGCAAAATGATGAGAATCATGAAAGGCCTCTCCTAAGCTTGAGCTTAAGCTCTTCGCCCAAGTATTCTGCCTTTGGTTCTATGAAGGAAGACAAGCTCATGAATCAATCATCTAGCTTGAGTCACCACCAGAGAGCTCCATCTTTGGATGGTAGCCTGCACATTGGCTCTGATGGTGCACGTACTTCAATTCAGGGACCTCCATCTTTTGGAGCTGCTGGAATTGCCAATAATTCATCTTTTGGATCAACGTATATGGCTGGCGGTACTAATAACTTGCCACCTCCTCCTGGAGCAGTGCGAGTCAACTCGGAGATTATACCTCCTCTAAAGCCTCCTCCTGGCAGGGCTGTTCCCCTGCCTCCTGAACCCCCTTCGTCTTTTAAGCCTCCATCGAGCATAGCTAGTCCTCCTCCTCCTCCTCCACCTCCTGCGCCATCAGCAAGTCCACCATCACCACCACCACCAAGGCCTCCTGGAAACTCAGGTCATGCTCCTGGACCTCCTCCACCTCCACCACCTGTCCGAGGCAACAAGGCAGGCCCAGGCCCTCCCCCACCCCCACCTCCCAAAAGTGGTGCTGGTCCCCCTAGGCCACCTCCATTAGCACCCAAAGGTGCAAATCCACCTCGACCTCCCAAACCTTTTGGAAACTCTGCTTCAGGTGATGATGAAAGTATGGATGATGGTATTCCCAAAGCCAAATTGAAACCATTTTTCTGGGACAAAGTTCTTGCAAACCCTGATCATTCCATGGTCTGGCATCAGTTAAAAGCAGGGTCTTTCCAATTCAACGAGGAGATGATAGAAACTCTTTTTGGATATACACCCGTTGATAAAACCAAATGTGAGGGCAAGAAGGAGTCATCATCACAAGATCCTGCACATCAGTATATTCAGATCATCGATTCAAAGAAAGCCCAAAATCTGTCCATTCTTTTGCGGGCACTAAATGTGACAAAAGAGGAAGTTTGTGATGCGCTTCATGAAGGAGGTGAGCTTCCTTCTGAACTTCTCGAGAACTTACTGAGGATGGCACCAACACCAGAGGAAGAACTCAAGCTTAGACTGTTTAGTGGGGAACTTTCTCAACTTGGAACTGCTGAGCGGTTCCTTAAATCTTTGGTTGATATTCCATTTGCTTTCAAAAGGTTGGAATCACTGCTTTTCATGGGCACTCTTCAGGAGGACATTACCATCACTAAAGAGTCCTTTGTTAACTTGGAGATTGCTTGCAAGGAACTTCGAAGCAGCAGGCTGTTCCTCAAACTTCTAGAAGCTGTTCTTAAGACGGGTAATCGGATGAACGTTGGAACTTTTCGAGGTGGTGCACAAGCATTCAAATTGGACACACTTTTAAAATTGTCAGACGTGAAAGGAAAAGATGGCAAGACTACACTATTGCACTTTGTAGTCCTGGAGATAATTCGCACAGAAGGGATAAGAGCTGCCAGGAATGCCACAGGAAGCCAGAGCTTCTCAAGCACCTCATCAAACGATCTGCTGGATGGAATTTCTAACGACACAGAAGAGCATTACCGCAGCTTGGGTCTTCAGGTCGTCTCGGGGTTAAGTGGTGAACTTCAGAACGTGAAGAAAGCAGCAACCATAGATGCTGATGCCTTGACTGGAACTGTTTCCAAACTTGGCCATGCACTGTTAAAGACAAGAGACTTTGTGAACAAAGACATGCAGGGTCTCGATGAAGATAGTCGATTTCACGAAATCGTGAAAAGCTTTGTGCAGACTGCTGAGGTCGATATCATGGCCCTCTTGGAAGAAGAAAAAAGAATCATGGAATTAGTGAAAAGCACGGGCGATTACTTCCATGGAAATGCAGGAAAAGACGAGGGCTTACGGTTGTTTGTAATAATACGAGATTTCTTAATAATGTTAGATAAGACGTGCCGAGAGGTAAAGGATGCACAGAAAAAACAGGCAAAGGGACACAGAAAGGCAGCATCGTCTTCTGATATCAATCCCCCTCCTTCAAGTTCAACTCCAGTTGTTTCTGATATCAATCCCCTTCCTTCAAGTTCAACTCCAGTTGTTTCTGATATCAATCCCCCTCCTTCAAGTTCAACTCCAGTTGTTTCTGATACCAATCATCCCCCGTCAAGTTCAACTCCAGTTGTTTCTGATACCAATCATCCCCCGTCAAGTTCAACTCCAGTTGTTTCTGATACCAATCATCCCCCTTCTGATATCAAACCCCCTCCTGATATCAATCGCCCGCCCCCGCCCCCGCCCCCACCTTCAGCTCCAGTTGTTTCTGGTCTACGACACCGGCCTTCAGCTCCAGTTGTTTCTGATCTACGACACCCGCCTTCTCCCGATCTGAATCAGCTAATCTTCCCAGCAATTATTGAACGTCGGGTGAGTGACTCAAGTTCAGATGATGAGAGTCCATAG 3123 45.34 MGVARRRCLVLLVILICDSLATCLKDHEEEELILSQLADPITGDVNTEMAELLLVKCNLDLFQLKEAVDGTDSCSEERPGSTNENNFECRMLTKEKTNRMLGAMHPHMKQSLLDCLRKNFHVSGKDYNSEAWYTRYLESLIFMPGSLRRKLSSRWLQSAKEASAPESSPSSKSPNFDDSSQSADGKPSRKASSTSGQKEKKSNNKQTVVIAVVVTATVTFIIVALLFLCFNKSGSRVKQNDENHERPLLSLSLSSSPKYSAFGSMKEDKLMNQSSSLSHHQRAPSLDGSLHIGSDGARTSIQGPPSFGAAGIANNSSFGSTYMAGGTNNLPPPPGAVRVNSEIIPPLKPPPGRAVPLPPEPPSSFKPPSSIASPPPPPPPPAPSASPPSPPPPRPPGNSGHAPGPPPPPPPVRGNKAGPGPPPPPPPKSGAGPPRPPPLAPKGANPPRPPKPFGNSASGDDESMDDGIPKAKLKPFFWDKVLANPDHSMVWHQLKAGSFQFNEEMIETLFGYTPVDKTKCEGKKESSSQDPAHQYIQIIDSKKAQNLSILLRALNVTKEEVCDALHEGGELPSELLENLLRMAPTPEEELKLRLFSGELSQLGTAERFLKSLVDIPFAFKRLESLLFMGTLQEDITITKESFVNLEIACKELRSSRLFLKLLEAVLKTGNRMNVGTFRGGAQAFKLDTLLKLSDVKGKDGKTTLLHFVVLEIIRTEGIRAARNATGSQSFSSTSSNDLLDGISNDTEEHYRSLGLQVVSGLSGELQNVKKAATIDADALTGTVSKLGHALLKTRDFVNKDMQGLDEDSRFHEIVKSFVQTAEVDIMALLEEEKRIMELVKSTGDYFHGNAGKDEGLRLFVIIRDFLIMLDKTCREVKDAQKKQAKGHRKAASSSDINPPPSSSTPVVSDINPLPSSSTPVVSDINPPPSSSTPVVSDTNHPPSSSTPVVSDTNHPPSSSTPVVSDTNHPPSDIKPPPDINRPPPPPPPPSAPVVSGLRHRPSAPVVSDLRHPPSPDLNQLIFPAIIERRVSDSSSDDESP 1040
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11379705 11386675 - Lag0037992.1 Lac2g1354 598618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1354 1040 MobiDBLite consensus disorder prediction 344 453 - -
Lac2g1354 1040 MobiDBLite consensus disorder prediction 272 308 - -
Lac2g1354 1040 PANTHER FORMIN-RELATED 405 911 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Lac2g1354 1040 SMART it6_source 463 883 IPR015425 -
Lac2g1354 1040 MobiDBLite consensus disorder prediction 970 994 - -
Lac2g1354 1040 Pfam Formin Homology 2 Domain 469 869 IPR015425 -
Lac2g1354 1040 SUPERFAMILY Formin homology 2 domain (FH2 domain) 534 890 - -
Lac2g1354 1040 MobiDBLite consensus disorder prediction 879 1017 - -
Lac2g1354 1040 MobiDBLite consensus disorder prediction 324 468 - -
Lac2g1354 1040 MobiDBLite consensus disorder prediction 894 967 - -
Lac2g1354 1040 Gene3D Formin, FH2 domain 468 897 IPR042201 -
Lac2g1354 1040 MobiDBLite consensus disorder prediction 161 204 - -
Lac2g1354 1040 ProSiteProfiles Formin homology-2 (FH2) domain profile. 463 895 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1354 Lac-Chr2:11379705 Lac9g1078 Lac-Chr9:25485814 1.00E-103 dispersed
Lac13g0243 Lac-Chr13:1734633 Lac2g1354 Lac-Chr2:11379705 6.30E-77 transposed
Lac2g1354 Lac-Chr2:11379705 Lac9g2080 Lac-Chr9:40406557 1.60E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1354 K28090 - csv:101213072 842.417