Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1368 ATGGGATTAGGCCTGGCCCAATCCTTTTGGCCTTGGCCTAATCCCCTCGGCCCATCTCTCCTTCGGAGTTTGCTTCCTAGTCATGTCTTCAGGTTAAGAAACAGCACACTTCCGATTCCGCCGCCCACTTTTGCCGGAATTTTTTCAATTCATCCTTTGACTCAGTCCTCTTCCGTTCCGATTACCCTTTCCTCTTCCCTTTCTTTTACACCCCATCTCTCTCTCTCTCTCTCACCTCCACCTCCGCCGCCATTCCGTCTGCAACTGGAAGTTTCCGACCATGCGATACTTGATTCACATACCCTTTTGGCTGTTTTTGTGTTGGTGTTCAATTTCGAGCTCTGTTTTGGACAGGATTACAACATTGGCGATGACACTCCGGCGGCGCCGCCGCCGGAGCAAGAAAACTGTAATGGGATTTTCTTAACGTACACTTTCATTTCGAGGGAGAGGGAGTTTCCCTATGTGAAGAATGTCTCTGCTCAGGCTTGGGCGTTTAAAGCTCAGGCCACTGTGCTGAACGCCGGTGACACGGAGCTCGTGGCTTGGAAGATGTACATTGGGTTCCAACACCGGGAGATTTTGGTGTCGGCCGATGGCGCTGTGTTGCTCGACGGTTCGGATTTCCCCGCCCCGGTCGGCAATGGGACGACGTTGGCGGGGTCTACTCAAACAGACTTGAAAACCTCCATTGAAACCGCCGGAGATTACGACCAAATTCAGGTGAGGATCGATATCACCGGAACGCAGTTCGGCGTCAAGAAGAACGGCATTCCGATGCCGAAGACGATTCGCCTTGCCAATGATGGCTATAAGTGCCCTCAGCCTCGACGCCGCGGCAAAAGCTATATGCACATATGCTGCAAGAAAGACCCCAAATTCAAGCCAAAGCCAAAACCAGTAAAGAAGACGAAGTTCTTACCGAGACAGAACGGCGATCTCTCGCTCACCTACGACGTCCTCCAAGCTTATGGGAACAACTACCTTGCACAAGTCACCATCGACAACAACAATCCGCTCGGCCGCCTCGACCATTGGAACTTAACTTGGGAATGGATGAGAGGAGAATTCATTTCCACAATGCGAGGAGCTTACACTCACAAACTGGACTACTTTAGCTGCATCTATGGCCCTGCAGGGCAATACTATCAAGATCTCGACTTCTCGCAGATCATGAACTGCGAGAAGAACCCCGTCATCGCCGACCTCCCCGCCGACCGAGCCAACGATTCCAAAGTCGGGAAGTTACCGTTTTGCTGCAAGAACGGCACGATCCTACCGTCGTTGATGGATGAAAGCAAAGCAAGATCCATTTTTCAGCTACAAGTGTATAAGCTTCCCCCTGACTCCAACAGAACAGCCTTGTACCCTCCTCAGAAATGGAAGATCAATGGCAATCTTAACCCCAATTACATATGTGGAGCTCCCATAAGAGTGGAACCAACACATTTTCCAGACCCAAATGGACTTCAAGCCACAAGCACAGCCATTGCAAGTTGGCAAGTGGTCTGCAACATCACAGCTCCAAAAGCCAAGCGATCAAGATGTTGTGTTTCATTCTCTGCTTATTACAATGACTCTGTTATTCCTTGCAACACTTGTGCTTGTGGGTGTGATGAAAATGAAACTTGCAACCCAAATTCTTCCCCAATGCTTCTTCCAGCAGAGGCCCTTTTAGTTCCATTTGCCAACAGAACTAGAAAGGCAAAAGCTTGGGCCAGAATCAAACACTTTCCAATCCCCAAAAGGCTCCCTTGTCCTGACAATTGTGGGGTTAGCATAAATTGGCATGTAAACTCAGATTATACCAGTGGTTGGACTGCTAGAATCACCCTTTTCAATTGGGAAGATTACCCTTTTGAGGATTGGTTTGCTGCTGTTCAATTGAACAGAGCTGCTAAAGGGTATGAAGATGTCTACTCCTTCAATGGGACAAAACTTCCACCAGATGTGATTAAGAATACCATCATGTTCCAAGGCTTGGAGGGTCTGAACTACCTCATGGGGGAGGTGAATGGGACGGACCCGAAATTCGATCCGAGAGTACCGGGAAAGCAGCAGTCAGTGATCTCTTTCTCTAAGAAGAATATGAGGAACCTCAATATAAGGGGAGGAGATGGATTTCCTACAAAAGTGTACTTCAATGGAGAAGAGTGTGCTCTTCCTCCACATTTTCCTTTAGGAAATGGTGCTGCTCATAGTCTCCATCTCAGCAATGAACTTCTGGTGCTGCTGCTCACAGTTATGACCTTTTTCATTCTCTTCACAGATGGCTTTCCTTGA 2283 48.49 MGLGLAQSFWPWPNPLGPSLLRSLLPSHVFRLRNSTLPIPPPTFAGIFSIHPLTQSSSVPITLSSSLSFTPHLSLSLSPPPPPPFRLQLEVSDHAILDSHTLLAVFVLVFNFELCFGQDYNIGDDTPAAPPPEQENCNGIFLTYTFISREREFPYVKNVSAQAWAFKAQATVLNAGDTELVAWKMYIGFQHREILVSADGAVLLDGSDFPAPVGNGTTLAGSTQTDLKTSIETAGDYDQIQVRIDITGTQFGVKKNGIPMPKTIRLANDGYKCPQPRRRGKSYMHICCKKDPKFKPKPKPVKKTKFLPRQNGDLSLTYDVLQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFISTMRGAYTHKLDYFSCIYGPAGQYYQDLDFSQIMNCEKNPVIADLPADRANDSKVGKLPFCCKNGTILPSLMDESKARSIFQLQVYKLPPDSNRTALYPPQKWKINGNLNPNYICGAPIRVEPTHFPDPNGLQATSTAIASWQVVCNITAPKAKRSRCCVSFSAYYNDSVIPCNTCACGCDENETCNPNSSPMLLPAEALLVPFANRTRKAKAWARIKHFPIPKRLPCPDNCGVSINWHVNSDYTSGWTARITLFNWEDYPFEDWFAAVQLNRAAKGYEDVYSFNGTKLPPDVIKNTIMFQGLEGLNYLMGEVNGTDPKFDPRVPGKQQSVISFSKKNMRNLNIRGGDGFPTKVYFNGEECALPPHFPLGNGAAHSLHLSNELLVLLLTVMTFFILFTDGFP 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11544127 11548732 + Lag0038006.1 Lac2g1368 598632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1368 760 Pfam COBRA-like protein 328 507 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Lac2g1368 760 PANTHER COBRA-LIKE PROTEIN 7 103 752 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1368 Lac-Chr2:11544127 Lac5g1439 Lac-Chr5:28836221 2.70E-300 dispersed
Lac2g1368 Lac-Chr2:11544127 Lac3g0547 Lac-Chr3:4181393 5.00E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1368 - - - 0.0