Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1369 ATGGCAAAATTAGGGTTTGCATTTGGGGCTTTGATGTGTGTAATGATGTTGTTGCAGAAAGGAGATGGCACTGAGTTCACAGTTGGAGGAGCAAAGGGTTGGGGAGTTTCAGTGGCACAAAGCTATAATCAATGGGCAGAAGCCAACAGGTTTCAAATTGGAGACTCTTTAGTTTTCAACTATTCTGCTGATCAAGACTCAGTGCTTCAAGTAACCCAAGATGCCTACAACAACTGCAGCATCCAAACTCCAATAAAACAGTATTCTGATGGCCACACTGTTTTCCAATTTGACAAATCTGGGCCTTACTATTTTATCAGTGGAAACAAAGACAATTGCCTAAAAAATCAGAAGCTGGTGGTGGTTGTGTTGGCTGATAGAACCAATTCAAGTTCTAATCAGACCAGCTCTCTGCCTCCTCCAACCTCTGCTCCATCTCCATCCCCATTTCCTTCTCCCTCAAATTCAACTGAGACAACACCTTCTCCTGCACCGGCAAATGATCAAACCGGCGGGCCTTCTCCTCCTCCACCGTCAGGGTCGACTGAGATCACCCCGTCTCCGCCACCTGCTGAGGAAACCAACCCACCTCCTCCTCCACCTGCTGAGGAATTCAATCCATCTCCGACGCCTGCTGGGGAAGAGTCTCCTTCTCCGACTCCGCCTCCAAGGACGGTTGAGATCAACCCTGCACCTCCAAGTTTCGGATCTTCGATCATCCCGAGCAGCATTGGCTCCATTGGAGCATTTGTTGCTGCTGTTATCTTAGCTTTCTAA 777 48.13 MAKLGFAFGALMCVMMLLQKGDGTEFTVGGAKGWGVSVAQSYNQWAEANRFQIGDSLVFNYSADQDSVLQVTQDAYNNCSIQTPIKQYSDGHTVFQFDKSGPYYFISGNKDNCLKNQKLVVVVLADRTNSSSNQTSSLPPPTSAPSPSPFPSPSNSTETTPSPAPANDQTGGPSPPPPSGSTEITPSPPPAEETNPPPPPPAEEFNPSPTPAGEESPSPTPPPRTVEINPAPPSFGSSIIPSSIGSIGAFVAAVILAF 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11549615 11551305 + Lag0038007.1 Lac2g1369 598633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1369 258 Gene3D - 23 129 IPR008972 -
Lac2g1369 258 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055(InterPro)
Lac2g1369 258 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Lac2g1369 258 FunFam Early nodulin-like protein 1 23 128 - -
Lac2g1369 258 Pfam Plastocyanin-like domain 34 116 IPR003245 GO:0009055(InterPro)
Lac2g1369 258 MobiDBLite consensus disorder prediction 168 229 - -
Lac2g1369 258 MobiDBLite consensus disorder prediction 140 158 - -
Lac2g1369 258 PANTHER BLUE COPPER PROTEIN 15 159 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Lac2g1369 258 CDD OsENODL1_like 24 124 IPR041846 -
Lac2g1369 258 MobiDBLite consensus disorder prediction 130 239 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1369 Lac-Chr2:11549615 Lac5g1434 Lac-Chr5:28717383 3.90E-41 dispersed
Lac2g1369 Lac-Chr2:11549615 Lac9g2175 Lac-Chr9:41218947 3.10E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1369 - - - 0.0