Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1401 ATGTTAAATCGGGCCGGGCGCCAGCATGCACCCCCGGTTTGGCCCGTTTTACTAAAAGCCCTCCCCACTTGGCCCACTTGGACCGAACCGTCTAGGTTCCTCTCCCGTGGGCCCCACGTCTCCTCTCGGGTCACGAATCTTCCGGGTCGGATCCGATCACGACCGTCCATTACCAATCGTGAACCGTCCACGTCATCACCCAGAAAATTCCAGCTCAATCCTGACTCCCATACGGATACGGATTCGCGGTGGAAACGGACTCTTGCCACCTTCCCCCAAATCTCTATAAATACTTCCGATCCTTTGCTCGATCCTCTCATCGTTCTTCCTTCTTTTTCTCTGTTCTTCTCCTTTTCTCGATCGCTTCGACTCTTTGCGTTCTTTTTCGTTTCGAGCTTTTCGTCCAAACAAGGGTTGATGGTTCAATTAGACCTGGAAATCCCATCTGCTTTCGATCCATTCGCGGACGCCAGGGATTCTGATGCCCCCGGAAGCAAGGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAGGAGTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTGGTCCAAGACAAAGAGTTGGGGAAGATAATTCAACTTCAGGGCGATCAGCGCAAGAACGTCTCCCAGTTCCTGGTTCACGCTGGACTTGTCAAGAAGGATCAGATCAAGATCCATGGGTTCTGA 756 51.32 MLNRAGRQHAPPVWPVLLKALPTWPTWTEPSRFLSRGPHVSSRVTNLPGRIRSRPSITNREPSTSSPRKFQLNPDSHTDTDSRWKRTLATFPQISINTSDPLLDPLIVLPSFSLFFSFSRSLRLFAFFFVSSFSSKQGLMVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11858863 11860196 - Lag0038039.1 Lac2g1401 598665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1401 251 Gene3D - 131 251 - -
Lac2g1401 251 ProSiteProfiles Translation initiation factor SUI1 family profile. 169 239 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Lac2g1401 251 NCBIfam translation initiation factor SUI1 146 251 IPR005874 GO:0003743(InterPro)
Lac2g1401 251 SUPERFAMILY eIF1-like 143 251 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Lac2g1401 251 MobiDBLite consensus disorder prediction 34 81 - -
Lac2g1401 251 CDD eIF1_SUI1 167 250 IPR005874 GO:0003743(InterPro)
Lac2g1401 251 Pfam Translation initiation factor SUI1 166 239 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Lac2g1401 251 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 142 251 - GO:0003723(PANTHER)
Lac2g1401 251 MobiDBLite consensus disorder prediction 38 73 - -
Lac2g1401 251 FunFam Eukaryotic translation initiation factor SUI1 141 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1401 Lac-Chr2:11858863 Lac5g1340 Lac-Chr5:26557174 2.70E-55 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1401 K03113 - csv:101202908 219.55