Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g1401 | ATGTTAAATCGGGCCGGGCGCCAGCATGCACCCCCGGTTTGGCCCGTTTTACTAAAAGCCCTCCCCACTTGGCCCACTTGGACCGAACCGTCTAGGTTCCTCTCCCGTGGGCCCCACGTCTCCTCTCGGGTCACGAATCTTCCGGGTCGGATCCGATCACGACCGTCCATTACCAATCGTGAACCGTCCACGTCATCACCCAGAAAATTCCAGCTCAATCCTGACTCCCATACGGATACGGATTCGCGGTGGAAACGGACTCTTGCCACCTTCCCCCAAATCTCTATAAATACTTCCGATCCTTTGCTCGATCCTCTCATCGTTCTTCCTTCTTTTTCTCTGTTCTTCTCCTTTTCTCGATCGCTTCGACTCTTTGCGTTCTTTTTCGTTTCGAGCTTTTCGTCCAAACAAGGGTTGATGGTTCAATTAGACCTGGAAATCCCATCTGCTTTCGATCCATTCGCGGACGCCAGGGATTCTGATGCCCCCGGAAGCAAGGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAGGAGTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTGGTCCAAGACAAAGAGTTGGGGAAGATAATTCAACTTCAGGGCGATCAGCGCAAGAACGTCTCCCAGTTCCTGGTTCACGCTGGACTTGTCAAGAAGGATCAGATCAAGATCCATGGGTTCTGA | 756 | 51.32 | MLNRAGRQHAPPVWPVLLKALPTWPTWTEPSRFLSRGPHVSSRVTNLPGRIRSRPSITNREPSTSSPRKFQLNPDSHTDTDSRWKRTLATFPQISINTSDPLLDPLIVLPSFSLFFSFSRSLRLFAFFFVSSFSSKQGLMVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF | 251 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 11858863 | 11860196 | - | Lag0038039.1 | Lac2g1401 | 598665 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g1401 | 251 | Gene3D | - | 131 | 251 | - | - | |
Lac2g1401 | 251 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 169 | 239 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Lac2g1401 | 251 | NCBIfam | translation initiation factor SUI1 | 146 | 251 | IPR005874 | GO:0003743(InterPro) | |
Lac2g1401 | 251 | SUPERFAMILY | eIF1-like | 143 | 251 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Lac2g1401 | 251 | MobiDBLite | consensus disorder prediction | 34 | 81 | - | - | |
Lac2g1401 | 251 | CDD | eIF1_SUI1 | 167 | 250 | IPR005874 | GO:0003743(InterPro) | |
Lac2g1401 | 251 | Pfam | Translation initiation factor SUI1 | 166 | 239 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Lac2g1401 | 251 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 142 | 251 | - | GO:0003723(PANTHER) | |
Lac2g1401 | 251 | MobiDBLite | consensus disorder prediction | 38 | 73 | - | - | |
Lac2g1401 | 251 | FunFam | Eukaryotic translation initiation factor SUI1 | 141 | 251 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g1401 | Lac-Chr2:11858863 | Lac5g1340 | Lac-Chr5:26557174 | 2.70E-55 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac2g1401 | K03113 | - | csv:101202908 | 219.55 |