Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1436 ATGGAAATAAGGTATTCTCAATCAAATTTGCGCAGACCCGAATTCCGACGTCCCGGTTTCCGATTCCGATTGATCGACGAACGTTGGTCGCCGGCGGTGGCGGATTGGTACCGTCTTCCCTCTAACCTCTGTATCCCTCCATACAATTGCCCGTACCCCCGCCCGTTGAATTCTCTTCTTTTCCGAACGGGGTATTTTTCGATATGTTTGTTGGTTTGTTCTATGGTATCTGTTGATTTCGGGGTTCGATTCTCCATGGCGTTTACCTCAATTCTCTTTTTTCTGCCAATGGCGTATACTTTGGAATCATGGACGAAGGAATACAGTGAAGCTTTGAAACTCTCTGAAGATATCAATGCCATGATTTCTGAGAGAAATTCACTTGCCGCATCTGGGCCGGAAGCTCAACGTCATGGCTCGGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTGCCCAAGCTTCAAGGAAAGCAACCAATACCAGAGAAAGAGATGAATCGCCGCAGGGATATGATTGCAAATTTGAGATCAAAAGCTAACCAGATGGCTTCAGCTTTGAACATGTCAAACTTTGCGAACCGTGATAGCTTACTTGGTCCAGAAATAAAGCCAGCTGATGTTATGAACAGAACAGCAGGCTTGGACAACCAAGGCCTAGTTGGTTTTCAACGACAAATTATGAGAGAGCAAGATGAAGGACTCGAGAAACTGGAAGGGACTATAATTAGCACAAAACATATTGCATTGGCTGTGAACGAAGAACTTAACCTTCACACGAGACTCATTGATGATTTGGATGAACATGTCGATGTTACTGATTCACGATTACGGCGAGTGCAGAAGAGGCTGGCAATATTGAACAAGCGGACCAAGGGTGGTTGCACTTGCATGTCTATGATTTTATCAGTTGTTGGGATTGTCGTTCTTATCGCTGTCATATGGCTACTCATCAAGTATTTGTAA 990 44.55 MEIRYSQSNLRRPEFRRPGFRFRLIDERWSPAVADWYRLPSNLCIPPYNCPYPRPLNSLLFRTGYFSICLLVCSMVSVDFGVRFSMAFTSILFFLPMAYTLESWTKEYSEALKLSEDINAMISERNSLAASGPEAQRHGSAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASALNMSNFANRDSLLGPEIKPADVMNRTAGLDNQGLVGFQRQIMREQDEGLEKLEGTIISTKHIALAVNEELNLHTRLIDDLDEHVDVTDSRLRRVQKRLAILNKRTKGGCTCMSMILSVVGIVVLIAVIWLLIKYL 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12263020 12266866 + Lag0038074.1 Lac2g1436 598700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1436 329 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 233 295 IPR000727 -
Lac2g1436 329 FunFam syntaxin-51 isoform X2 235 297 - -
Lac2g1436 329 SUPERFAMILY SNARE fusion complex 224 295 - -
Lac2g1436 329 SMART tSNARE_6 228 295 IPR000727 -
Lac2g1436 329 Pfam SNARE domain 270 320 IPR000727 -
Lac2g1436 329 Gene3D - 235 297 - -
Lac2g1436 329 CDD SNARE_Qc 236 293 - -
Lac2g1436 329 PANTHER SYNTAXIN 106 315 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1436 Lac-Chr2:12263020 Lac5g1038 Lac-Chr5:16893392 2.00E-74 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1436 K08503 - csv:101208669 407.142