Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g1459 | ATGATCACATTTAAACAACAGATCATAATATGGTGGGCTGGGCTAATGAGAGGAGCTGTGTCCATTGCTCTGGCTTTCAAACAGTTCACTTATTCTGGGGTTACATTGGATCCCACCAACGCAACAATGATTACCATCACCACAGTTGTTGTACTCTTCACTACGGTGGTATTTGGGTTTCTAACAAAGCCACTCATAAGATGTCTGCTTCCTCCCAACCAAGCAACTAATAATGCAAACAATTCCACTCCGAAGTTCACCGAAGAGGACATAACTCTCCCTTTGCTCTCCATGGAAGAGTCTGCTGCAACCAATGTCCTCCGTGCAAAGGATAGTTTGTCGATGTTGATAGAGAGGCCTGTTTATACCATACATTTCTTTTGGAGGAAATTTGATGATACCTACATGAGGCCTATATTTGGAGGGCCTCGCAACAACCAACCTGGTGGTTCTCGTTGTTAA | 462 | 43.72 | MITFKQQIIIWWAGLMRGAVSIALAFKQFTYSGVTLDPTNATMITITTVVVLFTTVVFGFLTKPLIRCLLPPNQATNNANNSTPKFTEEDITLPLLSMEESAATNVLRAKDSLSMLIERPVYTIHFFWRKFDDTYMRPIFGGPRNNQPGGSRC | 153 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 12531968 | 12532766 | - | Lag0038097.1 | Lac2g1459 | 598723 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g1459 | 153 | Pfam | Sodium/hydrogen exchanger family | 2 | 67 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Lac2g1459 | 153 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 2 | 145 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g1459 | Lac-Chr2:12531968 | Lac3g2313 | Lac-Chr3:32055108 | 7.50E-32 | dispersed | |
| Lac2g1459 | Lac-Chr2:12531968 | Lac4g2362 | Lac-Chr4:43243000 | 1.50E-24 | transposed |
Pathway information