Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g1467 | ATGAGTTGCTCGAAGAAGATTCCGGCAATGTCTTCTTCTTACAGCACTCACCTTCTTCTGTTTCCTCTCCTTCTTCACTCGTTCGTCGCGCTGGTCTCTGCTCAGGGATCTAATAATACTGCTCCATGGCAGACTCTGAGTGGAGGTGCTCCTTTTGTTGTGGCTCGTGGTGGATTTTCAGGGCTGTTTCCTGATTCGAGTGGACTTGCCTATAATCTTGCACTTTCGCTTAGTGTTCCTGATGTGATCTTATGGTGCGATGTGCAATTAACTAAGGATGGAGTTGGAATTTGTCTCCCGGATCTGAGGCTTGACAACGCTACTGACGGTGTGAACATTCTGGGGCCAAACCGCAGCAACGTCTATCTTGTTAATGGAGTCCCTACTAAGGGATTGTTTACGGTCGATGTCGATTCCCAAGATCTGGCAAATGTTTCTCTTATTCAAGGTGTCTATTCTCGAACTAATAAGTTTGATGGCAATGCTCTTGTTATTCTCACTCCTGAAGATGTTAAAAATCAGTTCAAGCCACCAGGACTTTGGCTGAATATTCAGCATGATGCATTCTTCACACAACAAAACTTGAGCATGAGGAACTTTGTACTTTCTGTATCCAGACGCATCGGTGTTAACTATATATCATCACCAGAGGTGGGATTTCTTAGGAGTATAGCTGCAAGATTTAATCCCCGCTCGACAAAGTTGATCCTTCGGTTCTTAGAACCAACTAATATTGAGGTTACCACCAATCAGACGTATGACTCTCTCTTACGCAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTCTCGTTCCCAAGACTTATATATGGCCCATTGATAAAGATGGTTACATACAACCTCAAACCTCTCTTGTTTCTGATGCTCATAAAGCACAGCTGGAAGTTTTTGCATCCGAGTTCTATAGTGACCTTCCACTAGGCTTCAACTACAGTTATGATCCCATTACTGAATACCTGTCTTACATCGACAATGGCAAATTTTCAGTCGATGGTGTGCTCACCGATTTCCCTATTAGTCCATCTTCAGCTATTGATTGTTTTGCTCATTTGGATAAGAATGCAAAAACTCAAGCTAAGCCTGTGGTTATTTCAAAATTTGGTGCTAGTGGAGACTACCCTGGTTGTACAGACTTGGCGTATTCCAATGCTATTTTAGATGGTGTAGAGGTGCTTGATTGTCCTGTTCAAATATCAAAAGATGGAACACCATTTTGCATGAGCTCAATCAATCTTATAGAAAGCACAACAATAGCTCAAACACAATTCACTTCTCGTTCAAAAAAAATTCCCGCAATTGGTCCTAATGACGGAATTTTTGCTTTTGACTTAACGTGGGAAGAGATTCAAGGCCTGACCCCATCAATATTGAGCCCTTATTCAAAGTTCACATTGTTCCGAAACCCAAGGTTCCGAAACAGTGGGAAATTCTTAACGCTACCTGATTTCTTGGCCATGGCAAAGAATGCAAGCACTCTTTCTGGTGTCTTGATCCATATTGAGAATGCAGCCTACCTTGCCGAGGAGCAGGGTTTAAGTGTAACTGATGCGGTCATTGATTCCTTGAGCAAAGCTGGTTATGATAATCAGATAGCCCTGAAAGTATTGATTCAATCTCCTAATAGCCCTGTCCTTATAAAATTTAAACAGGAAAATAAAAATTACGAGCTTGTTTATGAAGTTACAGAGCCAATTAGTGATGTGCTTAATGCAACTGTTGTGGACATCAAGAGTTTTGCCAACTCTGTGACTATCACCAAGGAATCTGTCTTTCCTGTAAATGAGCTATTTCTCACTGGATCTACAGATGTTGTGAACAAGCTGAAATCACATAATCTCTCCGTATATGTGGAAACCTTCAACAATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCAGATGCAACAGTAGAGATCAACTCATTTGTAATGGGAGCCGAGATTGATGGAGTTGTCACTGACTTTCCAAAGACATCTGCTAGATATAAAAAGAACCGGTGTCTAACAATGAAAGAACCACCTTTCTATATGAGCCCTGTCGCCCCTGGTAGCTTAATGCAACTGATTACTCCTGATTACTTGCCTGCAAAGAAAGCTCCGAACCTGGTTCTGAACAACACAGAGGTAACCGAGCCACCATTGCCTCCGGTATCGGCCAGGGCGCCACCACCTGCAGAGGGAGGTGGCACTGCAGCAACACCTCCAGCTTCTGCACCCAATGGACAACCTAAGCTTGGAGCTGGGGCAGGCTTCTTGCTGTTGAACCTGGCCATACTTTGCATTGCTCTTCTTCCATTCTGA | 2322 | 42.85 | MSCSKKIPAMSSSYSTHLLLFPLLLHSFVALVSAQGSNNTAPWQTLSGGAPFVVARGGFSGLFPDSSGLAYNLALSLSVPDVILWCDVQLTKDGVGICLPDLRLDNATDGVNILGPNRSNVYLVNGVPTKGLFTVDVDSQDLANVSLIQGVYSRTNKFDGNALVILTPEDVKNQFKPPGLWLNIQHDAFFTQQNLSMRNFVLSVSRRIGVNYISSPEVGFLRSIAARFNPRSTKLILRFLEPTNIEVTTNQTYDSLLRNLTFIKTFASGILVPKTYIWPIDKDGYIQPQTSLVSDAHKAQLEVFASEFYSDLPLGFNYSYDPITEYLSYIDNGKFSVDGVLTDFPISPSSAIDCFAHLDKNAKTQAKPVVISKFGASGDYPGCTDLAYSNAILDGVEVLDCPVQISKDGTPFCMSSINLIESTTIAQTQFTSRSKKIPAIGPNDGIFAFDLTWEEIQGLTPSILSPYSKFTLFRNPRFRNSGKFLTLPDFLAMAKNASTLSGVLIHIENAAYLAEEQGLSVTDAVIDSLSKAGYDNQIALKVLIQSPNSPVLIKFKQENKNYELVYEVTEPISDVLNATVVDIKSFANSVTITKESVFPVNELFLTGSTDVVNKLKSHNLSVYVETFNNEFVSQAWDFFSDATVEINSFVMGAEIDGVVTDFPKTSARYKKNRCLTMKEPPFYMSPVAPGSLMQLITPDYLPAKKAPNLVLNNTEVTEPPLPPVSARAPPPAEGGGTAATPPASAPNGQPKLGAGAGFLLLNLAILCIALLPF | 773 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 12594358 | 12602452 | + | Lag0038105.1 | Lac2g1467 | 598731 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g1467 | 773 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 375 | 665 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Lac2g1467 | 773 | SUPERFAMILY | PLC-like phosphodiesterases | 367 | 669 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Lac2g1467 | 773 | SUPERFAMILY | PLC-like phosphodiesterases | 50 | 346 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Lac2g1467 | 773 | FunFam | Glycerophosphodiester phosphodiesterase GDPDL3 | 49 | 351 | - | - | |
| Lac2g1467 | 773 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 366 | 669 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Lac2g1467 | 773 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 50 | 348 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Lac2g1467 | 773 | ProSiteProfiles | GP-PDE domain profile. | 368 | 670 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Lac2g1467 | 773 | CDD | GDPD_SHV3_repeat_1 | 51 | 351 | - | - | |
| Lac2g1467 | 773 | CDD | GDPD_SHV3_repeat_2 | 368 | 669 | - | - | |
| Lac2g1467 | 773 | MobiDBLite | consensus disorder prediction | 714 | 748 | - | - | |
| Lac2g1467 | 773 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 19 | 743 | - | GO:0008889(PANTHER) | |
| Lac2g1467 | 773 | ProSiteProfiles | GP-PDE domain profile. | 51 | 352 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Lac2g1467 | 773 | FunFam | Glycerophosphodiester phosphodiesterase GDPDL3 | 366 | 670 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac1g2887 | Lac-Chr1:49784813 | Lac2g1467 | Lac-Chr2:12594358 | 3.10E-158 | dispersed |
Pathway information