Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1468 ATGCTAGAGAATGAAAGTCGCTGTGTTGTTACAGAGCCACGTTTAGTGGCTAGAAAGTTTCTGGCTAGGCCTCAGCATGAAGGGTTGGGCGCCATTGTTAGAAGGAGCATTGGAAGGTTTGAGCTGAAATACTTTGACCCTTTTCTGGTTTTGGATGAATTTTCAGTGACTGCCCCAGCTGGTTTCCCAGATCATCCACATAGAGGATTTGAGACAGTTACCTACATGTTACAGGGAAGTTTAACACATGAAGATTTTGAAGGCCACAAGGGAACAATAAGTGCAGGTGACTTGCAATGGATGACTGCAGGTAAAGGAATTGTACATTCAGAAATGCCTGCAGCCCAAGGCACCCAAAAAGGCCTCCAACTATGGATCAACCTCTCTTCCAAGAATAAAATGATTGAGCCAAATTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTACAAAAGATGGAGTGAGAGTGAAAGTCATAGCTGGTGAGTCATTGGGAGCAAAATCACCAATCTACACAAGAACTCCAACCATGTACTTGGACTTCACTCTCAAGCCAAAAGCTCATCTCCAACAGCCGATCCCGTCGTCCTGGAACGCTTTCCTTTACATTCTAGAAGGTGAAGGTGTGTTTGGCAGTTCGAAGGCGACGTCGACGACGGCGCATAACCTTCTTCTGCTCGGGCTCGGGGACGGTTTAGAGGTATGGAATAAGTCAGCCAAGCCTCTAAGGTTCATTTTGGTGGGAGGTGAACCATTGAGTGAGCCTGTTGAGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACAATTGATGATTTTGATAACTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCAATTTCACTTGGGTTCTAA 906 44.92 MLENESRCVVTEPRLVARKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSLTHEDFEGHKGTISAGDLQWMTAGKGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPNYQEVSSKEIPEATKDGVRVKVIAGESLGAKSPIYTRTPTMYLDFTLKPKAHLQQPIPSSWNAFLYILEGEGVFGSSKATSTTAHNLLLLGLGDGLEVWNKSAKPLRFILVGGEPLSEPVEQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAAISLGF 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12608190 12611396 + Lag0038106.1 Lac2g1468 598732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1468 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Lac2g1468 301 CDD cupin_pirin_N 33 128 - -
Lac2g1468 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Lac2g1468 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Lac2g1468 301 FunFam pirin 27 164 - -
Lac2g1468 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Lac2g1468 301 CDD cupin_pirin_C 176 252 - -
Lac2g1468 301 PANTHER PIRIN-RELATED 10 294 IPR012093 -
Lac2g1468 301 Pfam Pirin 33 126 IPR003829 -
Lac2g1468 301 PIRSF Pirin 12 292 IPR012093 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1468 Lac-Chr2:12608190 Lac5g1007 Lac-Chr5:15945760 2.60E-137 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1468 K06911 - csv:101216351 559.681