Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1495 ATGAGCAGGATCTTCTCTTTCCATTCTCATGGGTTTTTTCTGCTGATTCTTGTTCTTCTTCTCTTGGCTTTCGCCGGAGAGAGCTCCGGCGGCGGCGGTGCTGTTGCAGCAGGGAGATCGTATTCCATGATCGGTTGGGATGATTTGCACGTGGATCCTCACGTGCGGCCGGGGCTGAACTCCGGCGGGTTCGAGAATGGGAGTAGGATAATTGTGGTGGATAAGAATGGCTCCGGCGACTCCACGACGGTGCAAGGGGCGGTCGACTTGGTTCCTCATAATAATAAACAGAGAGTTAAGATTTATATTCTTCCTGGAATTTACAGGGAGAAGGTATTTATCCCCATCACCAAGCCATATATTTCATTCATCGGAAACACGCAACGAGTTTCGGACACCGTTATTACATGGAACGACAAGGCGTCGGATAGAGATATCAATGGAATGGAACTCGGGACGTATAGAACGGCGACCGTTGCGATCGAATCCGACTATTTTTGTGCGACGGGAATCACATTCGAGCAGAATACAGTTGTTGCAGCTCCTGGAGATAAAGGAAGACAAGCTGTGGCTCTAAGGATTTCAGGAGAGAAGGCCATGTTTTATAAAGCCAAATTCTTAGGAGGACAAGATACACTTTTGGATGACATGGGCACTCACTATTTCTATCAATGTCACATTTATGGAAGTGTCGATTTCATATTTGGTAACGCTAAATCACTCTACGAGCAATGTGTAATAACTTCCACAGCAGAAAGCTCTGGAGCAATAGCAGCACATCATCGATCCTCGCCGAACGATGACACCGGGTTCTCTTTTGTGCGCTGCGTAGTCAATGGAAGTGGCAAGGTACTCCTGGGAAGAGCATGGGGAAACTATTCAAGAACAATATATGCTTACTGTTACATTGAAGATATAATAACTCCATTAGGATGGAGTGACTGGAACGACCCAGCAAGACAAAGGACAGTAGTTTTTGGGCAATATAATTGCAGAGGCAGTGGAGCCAACACACAAGGTTGGGTGCCATGGGCAAGGACTTTTAGCTCCGAGGAAGTGAGACCTTTTGTAGATAAGAAATTCATCAATGGAGAACAATGGCTTAACTTATGA 1113 46.09 MSRIFSFHSHGFFLLILVLLLLAFAGESSGGGGAVAAGRSYSMIGWDDLHVDPHVRPGLNSGGFENGSRIIVVDKNGSGDSTTVQGAVDLVPHNNKQRVKIYILPGIYREKVFIPITKPYISFIGNTQRVSDTVITWNDKASDRDINGMELGTYRTATVAIESDYFCATGITFEQNTVVAAPGDKGRQAVALRISGEKAMFYKAKFLGGQDTLLDDMGTHYFYQCHIYGSVDFIFGNAKSLYEQCVITSTAESSGAIAAHHRSSPNDDTGFSFVRCVVNGSGKVLLGRAWGNYSRTIYAYCYIEDIITPLGWSDWNDPARQRTVVFGQYNCRGSGANTQGWVPWARTFSSEEVRPFVDKKFINGEQWLNL 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12937640 12940920 + Lag0038133.1 Lac2g1495 598759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1495 370 Gene3D - 65 370 IPR012334 -
Lac2g1495 370 SUPERFAMILY Pectin lyase-like 69 369 IPR011050 -
Lac2g1495 370 ProSitePatterns Pectinesterase signature 2. 227 236 IPR033131 -
Lac2g1495 370 FunFam Pectinesterase 66 370 - -
Lac2g1495 370 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 369 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Lac2g1495 370 Pfam Pectinesterase 71 364 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2284 Lac-Chr11:38916533 Lac2g1495 Lac-Chr2:12937640 6.80E-81 dispersed
Lac2g1495 Lac-Chr2:12937640 Lac4g2556 Lac-Chr4:44735763 3.60E-72 dispersed
Lac2g1495 Lac-Chr2:12937640 Lac9g0505 Lac-Chr9:9587043 2.40E-44 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1495 K01051 - csv:101209316 568.926