Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1502 ATGGCTTGCGAAGAAGCGAGACAGCCACTGCTACCAACATCATCTAATACTATTGGAACAAGGTTAATAGATATTCCTAGAAGCAAAGGACGATTGAGGCGCACTAAGAGTGCTCCCCATGCAGATTCTCCTCATACAGAGACCACCGGCACTGGCACTGGCACGGCCACTGGTCCAGTTCCACGTTCAGGATTAGTTTTTGGAAACCTACACCCAAGTTTCAGAAGAGTAGCCTTAGTTTTAATGATATACTTGGGTATAGGAACTTTGTGTTTTTACCTTGTCAGGGACCAAATCAGAGGGGAAAAAACAAACGGAATAGTTGATGCCATTTATTTCACTATTGTGACAATGACAACTGTTGGATACGGAGATCTTGTCCCAAACAGTCCCTCCACAAAGCTACTAGCTTGTGCTTTTGTTTTCACAGGAATGGCCGTAGTTGGTCTAATACTAAGCAATGCAGCTGATTATTTGGTAGAGAAGCAGGAAATCTTGCTATTTAAGGCCTTGCATGAGCACCAAAATGCTGGATCTTGTGACATCACAAAAGAATTTGATACTAATAAAGCTAGAAACAAGTGTATAGTGGTGTTTCTCTTTCTTCTTTTGTTCATCATTTCTGGGACTGCCTTTCTAATCTCCCTTGAAAAGTTGGATTTCATTGATGCCTTTTATTGTGTATGTTCTACCATCACTACGCTAGGCTATGGAGATAAAAGCTTCTCGACTAAGTGGGGGCGTATCTTCGCCATTCTCTGGATCTTGATAAGTACCATCACTCTAGCTCAGTTTTTCCTTTACATTGCTGAGCTAAACACTGAAAGAAGGCAAAAGTCTTTGGTGAAGTGGGTTCTAAGTAAAAAGGTGACAGACTTGGACCTCGAGGTTGCCGATCTTGATAATGATGGGGTCGTCGGGGCTGCAGAATTTGTCATACACAAGCTCAAAGAGATGGGGAAAATTACTGAAGATGACATTTCACCTGTGCTGAAGGAATTTGAGAATCTTGATGTTGATCAGTCAGGAACCTTGTCCACATCTGATATAACACTTGCTCAATTGTCTTAA 1071 41.83 MACEEARQPLLPTSSNTIGTRLIDIPRSKGRLRRTKSAPHADSPHTETTGTGTGTATGPVPRSGLVFGNLHPSFRRVALVLMIYLGIGTLCFYLVRDQIRGEKTNGIVDAIYFTIVTMTTVGYGDLVPNSPSTKLLACAFVFTGMAVVGLILSNAADYLVEKQEILLFKALHEHQNAGSCDITKEFDTNKARNKCIVVFLFLLLFIISGTAFLISLEKLDFIDAFYCVCSTITTLGYGDKSFSTKWGRIFAILWILISTITLAQFFLYIAELNTERRQKSLVKWVLSKKVTDLDLEVADLDNDGVVGAAEFVIHKLKEMGKITEDDISPVLKEFENLDVDQSGTLSTSDITLAQLS 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12995117 12996342 + Lag0038140.1 Lac2g1502 598766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1502 356 SUPERFAMILY Voltage-gated potassium channels 74 166 - -
Lac2g1502 356 FunFam Calcium-activated outward-rectifying potassium channel 1 71 166 - -
Lac2g1502 356 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 77 296 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER)
Lac2g1502 356 PRINTS Two pore domain K+ channel signature 233 242 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac2g1502 356 PRINTS Two pore domain K+ channel signature 116 144 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac2g1502 356 Gene3D - 71 165 - -
Lac2g1502 356 ProSitePatterns EF-hand calcium-binding domain. 299 311 IPR018247 -
Lac2g1502 356 Gene3D - 179 284 - -
Lac2g1502 356 MobiDBLite consensus disorder prediction 29 58 - -
Lac2g1502 356 MobiDBLite consensus disorder prediction 42 58 - -
Lac2g1502 356 Pfam Ion channel 80 160 IPR013099 -
Lac2g1502 356 Pfam Ion channel 201 274 IPR013099 -
Lac2g1502 356 SUPERFAMILY Voltage-gated potassium channels 188 293 - -
Lac2g1502 356 SUPERFAMILY EF-hand 283 351 IPR011992 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1567 Lac-Chr10:16300081 Lac2g1502 Lac-Chr2:12995117 1.60E-95 dispersed
Lac1g3490 Lac-Chr1:54198269 Lac2g1502 Lac-Chr2:12995117 6.80E-51 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1502 K05389 - csv:101216032 588.186