Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1616 ATGCCCCCTCAGGGAGGGAGGTCCTCCCCGTTTTGTTTCAGACTAGATCTAGGCGGCGGCGCTGGCTTAGTCACGACGGATCTAGGCAGCTTCGATTACAATGGTGTGGATATGGACACGCGGCTCTGTGTCGCTTTCGAGCCTAGAGCATCTGAAAGTCGGGGCGTTTCTCATCCAAGTTGGATTACCCACTATCTCTCGTCGGGATTTTACGAGTTTGAGGGGGTGAAAGCAGAGTCTAAAGCCGAAAGGAGGCGAAATTCGAACCCTAAGTCGGTGCCTCTGTTGGCCGTGAATGAAGACGAGGAAGAAGAAGAACGAAAAACAGTGGTCGAGGGCTCCGATTCAGAGGACAGGGATCGAGACAACGATAAAGAAGATGAAGACGAACGAACGAAGAACGAACTAAGGGGAAGAAAACGAATGGAGGACAGAGATCGAGACAGCGATGAACGAAGGATTGGAGAACAAACGAAGAAAACAAACCCTAGGGCAAAGAATATCTCACCAGTAACGTTTTCAGAGGCTTATCTTCTTCTCTGTCGCCTCCATTGCCGCCGGCGACTGAGCTCTAAACCGACGAACATGGCCAACACCGGAGTCATGCAGCGGAATCATTTTTTCACACTGCTACTTCTCTCACTCTTCACCGTCGTCGTCCTCGCCGGAGAAACCTCATCCTTCTTCAACCACCGCAAGATCTCCGCCGTCAGAGCTTCTTCTGCCACTTCCAACTCCACCTACGCCGTCATCTTCGACGCCGGTAGCTCCGGCAGCCGCGTCCACGTCTTCCACTTCGATCAAAACCTCGATCTCCTCTTCATCGGTTCAGACATTGAGGTTTTCTCACAGATAAAGCCAGGGCTGAGTTCATACGCCGACGATCCTCAGAAAGCCGCGGATTCTCTGATTCCATTACTCGAAAAAGCAGAAGCCGCAGTTCCTCACGAACTTCAATCCGTAACGCCGATTCGCCTCGGGGCGACGGCAGGGCTTAGGTTTCTGGAAGGCGATAGATCTGAGAGGATTCTGGAAGCGGTTAGGGTTCTTCTGAAAACGAAGAGCGGATTCAAGTACGAAGCGGATTCTGTTTCGATTCTTGATGGAAATCAAGAAGGTTCATATCAATGGTTGACAATAAACTATTTGCTGGAGAATTTGGGGAAGAGATATTCTTCCACAGTGGGAGTAATTGATCTTGGAGGTGGCTCTGTTCAAATGGCATATGCAATTTCTGATGAAGATGCAGCAAACGCACCCATTTCTTCTGATGGAAACTCCAAATTTGTTCAGAATTTCTTTCTCAAGGGTGAAAATTATAACCTCTACGTTCACAGAAACCAAAAATCAAATGGTTATCGAACTAAGGCATCGAACGGAACTGGCGGCGGCGATGGTCTTCGAGTAGCGGCAATGGAGTTGAGTTATTTGCGCTACGGTTTACAAGCTGCCCGAGTAGAGATTTTGAAGGTGACCAAAGAACTTGGCAACCCCTGCATTTTAGCTGGTTATGAAGGTACGTACACATACGGCGGAGAAGAATACAGAGTCTCAGCTCCTGGATCGGGGTCGAGCTTCGCTCGTTGCCGGAGAGTGATTTTAGAGGCACTGAAAATCAACCAATCTTGTGGCTACGACGAGTGCACTTTTGATGGAATATGGAGTGGCGGTGGAGGAGCCGGTGCCCAGAATCTCTATGTGGCTTCCTTTTTCTTTGACAAGGCAGCTCAGGCGGGTTTCATTGATTCCAACAAACCAGACGCCATAGTGAAACCCATTGATTTCAAGAGAGCAGCAAGGATTGCTTGTCAAACTAAGTTTGTAGATGCAAAATCCAAATACCCTAATGTTTACTCAAGTGACTTGCAATTTGTGTGCTTGGATCTCGTTTACGAGTATGCGCTCCTTGTCGATGGATTCGGTATTGATTCTCGAAAGAAGATAACATTGGTGAAGCAAGTGGCGCATCATGGTTCCCTTGCAGAGGCAGCATGGCCATTGGGCAATGCTGTAGCGGTCATCTCATCGCCAAAGCACTCAACTGCCTAA 2049 48.76 MPPQGGRSSPFCFRLDLGGGAGLVTTDLGSFDYNGVDMDTRLCVAFEPRASESRGVSHPSWITHYLSSGFYEFEGVKAESKAERRRNSNPKSVPLLAVNEDEEEEERKTVVEGSDSEDRDRDNDKEDEDERTKNELRGRKRMEDRDRDSDERRIGEQTKKTNPRAKNISPVTFSEAYLLLCRLHCRRRLSSKPTNMANTGVMQRNHFFTLLLLSLFTVVVLAGETSSFFNHRKISAVRASSATSNSTYAVIFDAGSSGSRVHVFHFDQNLDLLFIGSDIEVFSQIKPGLSSYADDPQKAADSLIPLLEKAEAAVPHELQSVTPIRLGATAGLRFLEGDRSERILEAVRVLLKTKSGFKYEADSVSILDGNQEGSYQWLTINYLLENLGKRYSSTVGVIDLGGGSVQMAYAISDEDAANAPISSDGNSKFVQNFFLKGENYNLYVHRNQKSNGYRTKASNGTGGGDGLRVAAMELSYLRYGLQAARVEILKVTKELGNPCILAGYEGTYTYGGEEYRVSAPGSGSSFARCRRVILEALKINQSCGYDECTFDGIWSGGGGAGAQNLYVASFFFDKAAQAGFIDSNKPDAIVKPIDFKRAARIACQTKFVDAKSKYPNVYSSDLQFVCLDLVYEYALLVDGFGIDSRKKITLVKQVAHHGSLAEAAWPLGNAVAVISSPKHSTA 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14384491 14400893 - Lag0038254.1 Lac2g1616 598880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1616 682 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 367 382 IPR000407 GO:0016787(InterPro)
Lac2g1616 682 MobiDBLite consensus disorder prediction 97 160 - -
Lac2g1616 682 MobiDBLite consensus disorder prediction 80 167 - -
Lac2g1616 682 Gene3D Exopolyphosphatase. Domain 2 369 655 - -
Lac2g1616 682 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 210 673 IPR000407 GO:0016787(InterPro)
Lac2g1616 682 Pfam GDA1/CD39 (nucleoside phosphatase) family 243 445 IPR000407 GO:0016787(InterPro)
Lac2g1616 682 Pfam GDA1/CD39 (nucleoside phosphatase) family 474 676 IPR000407 GO:0016787(InterPro)
Lac2g1616 682 CDD NBD_sugar-kinase_HSP70_actin 250 409 - -
Lac2g1616 682 Gene3D - 235 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1721 Lac-Chr1:38682705 Lac2g1616 Lac-Chr2:14384491 1.50E-138 dispersed
Lac1g2396 Lac-Chr1:45329280 Lac2g1616 Lac-Chr2:14384491 3.10E-137 dispersed
Lac2g1616 Lac-Chr2:14384491 Lac6g1586 Lac-Chr6:21878414 3.20E-34 dispersed
Lac2g1616 Lac-Chr2:14384491 Lac7g2698 Lac-Chr7:46029948 5.70E-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1616 K14641 - gmx:100787491 493.426