Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1638 ATGGTACCTTCGGGGCCATCCACTCCCATTGGTGGTGCGCAGTCTGTTTCACCATCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCCCCACGGACTCAGTTTAGTAGTATGAATATGCTTGGTAATATGCCCAGTATGTCTTCCCTCCTTAATCAGTCATTTGGGAATGGAGTTCCAAATTCTGGGCCCTCAGGTATTGGAAACAGCCAACGAGGAGGTATGGACCCTGGTTCTGAATCAGATCCCTTTTCACTTGTAGGCAATGGTGTGAACTTCAATAATACTCCATCGTCATTGGTGGCATCAAATACAGTAAACCCTGGTTCGTCTAGTCAAGTTTCAGGGCCACAATTTTCAAACCATTCTAGCAGCCAAATAATACCCAATCAACACCAGCAACAGCAAATTGAACCCCAGAACTTCCAACATAATCAGCATTCGATGCAACAGTTTGCTACCTCTAATAACACACAGCAGTCACAGCAACAGCAGCAACAACAACAACAACATCAATTCCAACCTATTCGAGGTAGCTTATGTGGTGTTGGACCTGTCAAGTTAGAGCCTCAAATGAACAATAATGATCTTCAAGGGCAGCAACTACAGCAGCAGCAGCAGTTGCAGTCAATGAGGAATCTTGGTCCTGTGAAACTGGAACAGCAACAACTTCAATCAATGAGAAACTTGGGTCCTGTGAAATTGGAACCTCAACAGTCTGATCAGTCATTGTACCTACAGCAGCAACATCAACAGCAACAGCAACAGCAACAGTTGCTCAGTATGTCTAGGCAGTCGTCTCAGGCTGCTGCTGCACAGATTAATCTTTTGCAACAACAAAGACTCTTGCAATTTCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTGCCATTGAGATCCCCTGTAAAACCAGTTTATGAACCTGGCATGTGTGCTCGACGTTTAACAAATTATATGTACCAACAACAGCACAGGCCTGAAGACAACAATATTGAGTTCTGGAGGAAATTTGTTGCGGAGTACTTTGCTCCCCATGCAAAAAAGAAATGGTGTGTTTCCATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCACAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCAACTTTTGAAGTTCTTCCAAGACTGTTCAAAATCAAGTATGAAAGTGGAACTCTCGAAGAGCTGCTCTATGTTGATATGCCTCGTGAATATCATAATTCATCTGGACAAATTGTTCTAGATTACGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGGCAACTTCGAATAGTTTTTTCTCCAGACTTAAAGATATGCTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGGAGGTTACTAATACCTCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGAAGTATCAGACTGCTATTCAAAATGCATCATCTAACTTGTCTACTCCAGAGTTGCAGAATAATTGCAACATGTTTGTAGGCTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACAAAGAGATATGTCCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATCGATTACAGCCAAGAAACTACGACTGGCCCAATTGAGAGTTTGGCCAAGTTTCCACGGAAGACAAATGCTTCACCAGGCTTCCACAACCAAGCTCAAAATACCGAGCAACAATTACCCCAGCCCCAACAAACAATGGATCAAAACACAAACGGCGACCAAAGCTCTGTTCAGGCTGCTGCTATGCAGCTTGCTGCTACCAATGGTGTTCCGAGTGCAAATAACTCCGCTAATAATCCAGCATCAACATCATCTCCTGCTAGTACCATTGTTGGGTTACTCCACCAGAATTCCATGAACTCCAGACAGCAGAACTCAATCAATAGCGCTGGCAGCCCATATGCTGGGAATTCTGCACAAATATCGTCCCCAGGTTCCTCCACCACGATTCCTCAGGCACAAGCAAACTCCGCCTTCCAATCACCTGCATTATCCTCACCTAACAATCCCCCACAGTCATCAATTGGCACAGCAACGACTAATCACATGAGTGCCACCAATTCTCCGGCAAATGTCTCCTTGCAACAGCCAACACACTCTTCTGAAGCGGATCAAAACGATTCCCAGAGTTCCGTGCAAAAGATTATTCAAGAATACATGATGTCGAACCAACTAAACGGGATGAACACGATGACTGGTGTCTCCTCTCTAGGAGATGATGTGAAAAATGTCAACGGGATGTTGCCAACGAACAATATTATGAGTCTCAATGGTCGGAACTGCCTCGTTGGGAGTGGAACTGCTAATAGTGTTTCTGGTATGAGGAATGCGGGATATGGCTCAATGGGTGGAGGACTTGCACAGGCTTCTATGGTCAATGGAATGAAGTCTGCAATGGGAAATAACTCGATTTCGAACGGGAGAATCGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAATCATCAAGATTTGGGGGACCAGCTTCTTAATGGACTTGGAGCAGTGAATGGATTTAATAATCTTCAATTCGATTATTGA 2730 44.4 MVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNMPSMSSLLNQSFGNGVPNSGPSGIGNSQRGGMDPGSESDPFSLVGNGVNFNNTPSSLVASNTVNPGSSSQVSGPQFSNHSSSQIIPNQHQQQQIEPQNFQHNQHSMQQFATSNNTQQSQQQQQQQQQHQFQPIRGSLCGVGPVKLEPQMNNNDLQGQQLQQQQQLQSMRNLGPVKLEQQQLQSMRNLGPVKLEPQQSDQSLYLQQQHQQQQQQQQLLSMSRQSSQAAAAQINLLQQQRLLQFQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKPVYEPGMCARRLTNYMYQQQHRPEDNNIEFWRKFVAEYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLSTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETTTGPIESLAKFPRKTNASPGFHNQAQNTEQQLPQPQQTMDQNTNGDQSSVQAAAMQLAATNGVPSANNSANNPASTSSPASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSAQISSPGSSTTIPQAQANSAFQSPALSSPNNPPQSSIGTATTNHMSATNSPANVSLQQPTHSSEADQNDSQSSVQKIIQEYMMSNQLNGMNTMTGVSSLGDDVKNVNGMLPTNNIMSLNGRNCLVGSGTANSVSGMRNAGYGSMGGGLAQASMVNGMKSAMGNNSISNGRIGMASLAREQSINHQDLGDQLLNGLGAVNGFNNLQFDY 909
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14671595 14682086 - Lag0038276.1 Lac2g1638 598902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1638 909 PANTHER LIM DOMAIN-BINDING PROTEIN 235 905 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Lac2g1638 909 MobiDBLite consensus disorder prediction 8 41 - -
Lac2g1638 909 MobiDBLite consensus disorder prediction 682 774 - -
Lac2g1638 909 MobiDBLite consensus disorder prediction 601 639 - -
Lac2g1638 909 MobiDBLite consensus disorder prediction 64 188 - -
Lac2g1638 909 MobiDBLite consensus disorder prediction 64 91 - -
Lac2g1638 909 MobiDBLite consensus disorder prediction 607 639 - -
Lac2g1638 909 Pfam LIM-domain binding protein 344 598 IPR029005 -
Lac2g1638 909 MobiDBLite consensus disorder prediction 1 41 - -
Lac2g1638 909 MobiDBLite consensus disorder prediction 100 188 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1638 Lac-Chr2:14671595 Lac8g1749 Lac-Chr8:35735992 6.80E-274 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1638 - - - 0.0