Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1694 ATGGAAGTCGACTCCGGCGAGGCGGTGGCGCCGGTGGCAGAAGCTGTGGAACAACAAGAAGTTAGTGGCGGTGGCGGCGGCGGGTCGAATTCCGGTGAAGAAGATAAGGGGATGCTGCTGTTTGAAGATGGAGAGAAGAATTTTGGTGGGAACCGATGGCCTCGACAAGAGACTTTGGCTTTGTTGAAGATAAGATCCGATATGGATGCAGTTTTTAGAGATGCAACTCATAAAGCTCCATTGTGGGATGAAGTTTCAAGGAAGTTGGGGGAGCTCGGATTCAATCGAAATCCGAAGAAATGCAAGGAGAAATTTGAGAATGTTTACAAGTATCACAAAAGAACCAAAGAAGGTCGAAGTGGGAAATCCGATAATAGCAAAAAAGTTTATAGATTTTCTGATGAATTGCAGGCTTTTGATCATAGTCATAATCACAATAATCACATTCCATTTCAATCTCACCACCGCCAGCCGCCACTCCCGCCGCCGCCAGTCCCTCGGCCGACGACGCCGCTGCCGCCTTACAATCCCCCGGCGAAAACAATCACTTCCACTGTTCCATCGAACACTACAAACAACAACTCTTTGCCACCGAAATCTGTCAACCCTCTATCCAATTTACCAAACATGGCTGCCAATATGATGTTTTCGAGCTCGACGTCGTCATCGACGGCGTCGGAGGAAGATCCGTTCCGGAGCAGGAGGAGGAGGAAGAAGAGGAAATGGAGCGATTTCTTCGTGAGGCTGACGAAGGAGGTGATAGAGAAGCAAGAAGGGCTTCAACTAAAGTTCTTAGAAGCCTTGGAGAGAATAGAGAATCAAAGGAAATTGAGAGACGAAGCATGGAGAATGAAAGAGATGACAAGGGTCAATCAAGAACACGAAGTTCTAGTCCAAGAAATGTCCATGGCTGCCGCGAAAGACGCCGCCGTCGTTGCATTTTTGCAAAAGATAGCCCCTTCTGCTGCTTCTCCACCGCCACCGCCACAGCCACCGCCGTCGACGACTCAGGCTCAGAACAACGGCGAGAACGGAAAGGTGACCGTGACTGTCCCCGCCGCCGTCGTAGGAAGCCCTTCAAGATGGCCAAAGACAGAAGTGGAAGCATTGATAAGGCTTAGAACAGAATTGGAAATGAAGTATCAAGATCAGAATGGGCCAAAAGGGTTGCTATGGGAAGAGATTTCAACAGCCATGAAAGGGCTTGGATACAATAGGAGCTCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATACTTCAAAAAGGTCAAAGACAGCAACAAGAAAAGGCCAGAAGATTCCAAGACATGTCCCTACTTTCACCAATTGGATGCCATATACAGAGAGAGAGAAAAAAACATGAGTTTTGATATCAATAGCCAAATGGAGCCATTGATGGTTGAACCAGAACAGCAATGGCCACCTCCATTTCAGGCCAATCAAATGATGGGAAATAATTTGCAAGGAAATCAAGAGGAACATGATGATGATGATGAAGAAGAAGAAGAAGATGATGATGGAGGAAGTAGTAGCACAGATGTTGAAGATTGA 1557 46.69 MEVDSGEAVAPVAEAVEQQEVSGGGGGGSNSGEEDKGMLLFEDGEKNFGGNRWPRQETLALLKIRSDMDAVFRDATHKAPLWDEVSRKLGELGFNRNPKKCKEKFENVYKYHKRTKEGRSGKSDNSKKVYRFSDELQAFDHSHNHNNHIPFQSHHRQPPLPPPPVPRPTTPLPPYNPPAKTITSTVPSNTTNNNSLPPKSVNPLSNLPNMAANMMFSSSTSSSTASEEDPFRSRRRRKKRKWSDFFVRLTKEVIEKQEGLQLKFLEALERIENQRKLRDEAWRMKEMTRVNQEHEVLVQEMSMAAAKDAAVVAFLQKIAPSAASPPPPPQPPPSTTQAQNNGENGKVTVTVPAAVVGSPSRWPKTEVEALIRLRTELEMKYQDQNGPKGLLWEEISTAMKGLGYNRSSKRCKEKWENINKYFKKVKDSNKKRPEDSKTCPYFHQLDAIYREREKNMSFDINSQMEPLMVEPEQQWPPPFQANQMMGNNLQGNQEEHDDDDEEEEEDDDGGSSSTDVED 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15517935 15519984 - Lag0038332.1 Lac2g1694 598958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1694 518 MobiDBLite consensus disorder prediction 321 335 - -
Lac2g1694 518 MobiDBLite consensus disorder prediction 1 36 - -
Lac2g1694 518 MobiDBLite consensus disorder prediction 476 491 - -
Lac2g1694 518 MobiDBLite consensus disorder prediction 141 239 - -
Lac2g1694 518 ProSiteProfiles Myb-like domain profile. 360 419 IPR001005 -
Lac2g1694 518 FunFam Trihelix transcription factor GT-2 362 424 - -
Lac2g1694 518 MobiDBLite consensus disorder prediction 155 180 - -
Lac2g1694 518 MobiDBLite consensus disorder prediction 181 227 - -
Lac2g1694 518 Gene3D - 53 114 - -
Lac2g1694 518 Gene3D - 362 424 - -
Lac2g1694 518 CDD GT1 51 116 - -
Lac2g1694 518 MobiDBLite consensus disorder prediction 469 518 - -
Lac2g1694 518 ProSiteProfiles Myb-like domain profile. 45 109 IPR001005 -
Lac2g1694 518 CDD GT1 360 426 - -
Lac2g1694 518 PANTHER FI21293P1 24 495 - -
Lac2g1694 518 FunFam Trihelix transcription factor GT-2 53 114 - -
Lac2g1694 518 Pfam Myb/SANT-like DNA-binding domain 360 448 IPR044822 -
Lac2g1694 518 Pfam Myb/SANT-like DNA-binding domain 51 131 IPR044822 -
Lac2g1694 518 SMART sant 49 111 IPR001005 -
Lac2g1694 518 SMART sant 358 421 IPR001005 -
Lac2g1694 518 MobiDBLite consensus disorder prediction 321 344 - -
Lac2g1694 518 MobiDBLite consensus disorder prediction 494 518 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1694 Lac-Chr2:15517935 Lac9g0286 Lac-Chr9:4524302 3.40E-84 dispersed
Lac2g1690 Lac-Chr2:15438676 Lac2g1694 Lac-Chr2:15517935 6.30E-96 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23517 PF13837 Myb_DNA-bind_4 2.40E-22 CL0123 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1694 - - - 0.0