Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1698 ATGGGCCGAAAGAAGCCTACTGCACGGGATGATGACAGCGCCCCTGCGGCAGCTCAGGGTGGTGGGAAGTCGAAGAAAAAGACATTTGCAGTAGACGACGACGAGTACTCCATTGGTACTGAGTTGTCTGAAGAAGCCCCAGTTCAGGAGGAGAAGGTCGTGATAACTGGGAAAAAGAAGGGTAAGAAGGGCAACTCAAAAGCTTCACAAGTTAAAGAGGAGGAGGAGGATGACGAGGATGGTGTTTCAGAAATTGTTATCACCGGGAAGAAGAAGGGTAAGTCGAAGAAGGGTGGAAGTAGCAGTGCTTTTGCTGCTTCTAGTTTTGGTTTGCTTGAGGAGGAAGGAAATGATGGCGCTGATGACGATGATGATGAAGAATCTGTGTTAACTGCAGAAAAAGATGATGATGAAGGGGATGATTCTGCAATCAAGTTTTCAGGTAAGAAGAAGTCGTCAAAGTCTTCCAAGAAGAGTGGTTTTTCTGCAGTGTCAACATTCAGTGCCCTTGATGACGAGAAAGATGAAGATGTAATTGATGATGAAAACAAAGTTGATGAGGAGATTGATGATGAGCCTGTTATTGCATTTACTGGTAAGAAGAAGTCATCAAAAGGTGGCAAGAAGGCTGGGAATGCATTTACAGGTTTTAGTGGTCTTAATTATGAGGATGAGGACAGAGATGATGACAAGGATGAGGATGAAGATGTTACAACAATTAGCTTCTCTGGTAAGAAAAAGAAGTCAGCTAAGGCTTCAAAGAAAAGTGGCAATTCGTTTAGTGCAACATTCACCGGTGAGGATAATGATGGTGATATTTCTATTCCAGAGGCAAACAAATTAGACAATGATGGTGTTGATGAAGACGATGCCAATGTTATTGCATTTTCTGGCAAGAAAAAGTCCTCTAAGAAGAAAAGCAGCAGTACTTTTACTGCATTAAGTGATGAAAATGCACTGGGCAATGAAATTAGAGATGTAGTCGTACCTGAAATACTTAACACAGCAAGTAGCAATTTTGATTCTGATTTATCTAAAGCTAACAAGACGGAGGGGGTGGCAGAAACTTCAAAAAATAAAAAGAAAAAGAAGAAGAGTGGAAGGACCGCTCAAGAAGAAGATGATTTGGATAAGATTCTTGCTGAGCTAGGAGAGGGGCCTACTGTATCAAAACCAGCAGACCCTCCTCTTTCTTCACAAGAGCCCAAAGTTGAAAATCCACCTGAGCTTGTAGCTCCTCCTGATGCATCGGTTGAAAAGGAAGCTGAAGAAGAGAGCACAGAATCAGCTGCAGCAAGGAAGAAAAAAAAGAAGAAGGAGAAGGAAAAGGAAAAAAAGGCTGCAGCTGCAGCAGCTGCTGCTGCTGAAGGGAATGATGAGAAAATTGAGGAGGTAAAGACCGAAATTATAGAACCCAAAAAAGGTGCTGCAAAGAGTAAAGTGCCTGAGAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCAATGGCTAGGAGAAAAGAAGAAGAAGAAAGAAGGAAAAGAGAAGAAGAAGAGAGATTAAGAAAGGAAGAAGAAGAGAGGCGTAGGCAAGAAGAACTTGAAAGGCAAGCTGAGGAGGCTAAGCGTAGGAAAAAGGAAAGAGAAAAAGAGAAGCTCCTAAAGAAGAAACAGGAAGGCAAGCTGTTAACGGGAAAACAAAAGGAAGAACAACGAAGGTTGGAGGCAATGAGGAACCAGATATTAGCAAGTGCGGGGGGTTTACCTCTGTCTACATCTGACCCTAGTGCACCAGCCAAACGACCTAAATACCAGACTAAGAAGACAAAATCAGCACATCACCAAACAAATGGTAGTGTGCAAACTAAGGTAGTGGAACATATAGAAGATAAAATACAAGAAAAAGATGTGGCAGAGACTGAAATATTGGAGTCTGAGAAGATTGAAGCTGTTGAGCCGATGCGCTTGGAGGAAAAATCAGATGTTGTTGAAGCTACTGAAGATAAAGAAATTCAAGAAGACGAGGATGAGGACGAATGGGATGCAAAGAGTTGGGATGATGCTGTTGTTGATCTTTCCTTAAAAAGTTCCTTTGCTGATGAGGAGCTTGAATCCGAACCAGAGAATGGCATTAAAAAAGATAGAAAGAATGGTGCAACGACTTCACGTGATGCAGATGACAAGCAAAAAGCTTCAATTCCAGATATTGAAAACAAGAAGGTCGATGTCAACAAGGGCAAAAGAAAAGATGATGCTGTTAAGAAAAAAGCTTCAATTCCAGATGCTGCTCCTAAACAACAGGAAGAAAATCTCCGCTCACCCATCTGTTGTATTATGGGCCATGTTGATACTGGTAAAACCAAGCTACTGGACTGTATTCGTGGTACAAATGTTCAAGAGGGAGAGGCAGGAGGAATTACTCAGCAGATTGGGGCAACATATTTTCCTGCCGAGAACATTCGTGAAAGAACTAGAGAATTGAAAGCTGATGCAAAGCTGAAGGTTCCTGGTCTACTTGTTATTGATACCCCTGGGCACGAATCGTTTACAAACTTACGTTCTCGTGGTTCTGGTTTATGTGATCTTGCAATTTTGGTTGTTGACATCATGCACGGCTTAGAGCCACAAACAATAGAATCTCTTAATCTCTTGAGGATGAGAAACACAGAATTTATTGTTGCTCTGAATAAGGTTGACAGACTTTATGGGTGGAAAACAATCCGTAATGCACCAATACTTAAGACAATGAAGCAGCAATCCAAGGATGTGCAGAATGAGTTCAATATGAGGCTTATTCAGATTATCACTCAATTTAAAGAGCAGGGATTGAATACCGAGCTGTATTATAAAAATAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTTACTGGTGAAGGTATTCCAGACATGTTATTATTATTGGTGCAATGGGCCCAGAAAACCATGACGAAGAAACTTACATATAGTGATGAAGTGCAGTGTACGGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGGACAACTATTGATGTCATATTGGTTAATGGTGTGCTGCACGAAGGAGATCAAATAGTTGTTTGTGGCATGCAGGGCCCAATTGTTACCACTATTCGAGCCCTATTGACGCCCCATCCAATGAAGGAACTCCGAGTGAAGGGAACATATCTGCATCATAAGGAAATCAAGGCTGCTCAGGGAATAAAAATAACTGGACAGGGTCTTGAGCATGCCATTGCTGGAACCAGTCTTCATGTGGTAGGTCCTGAGGATGACTTGGAAGACATTAAGGATTCAGCTATGGAAGATATGAAGTCAGTCTTGAGCAGGATAGACAAGACTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGTCCCCAGCAGTGAGCATTCCTGTTAGTGGAATAATGACTCCAGAAGCTCGAGAACTTGCCGATGAGCTTGGTGTGAAGATTTTTATTGCAGATATCATTTATCACTTGTTTGACCAATTCAAGGCCTATATCGATAATCTTAAAGAGGAAAAGAAGAAAGAAGCCGCTGAAGAAGCAGTCTTTCCTTGTGTTCTCAAGATTTTACCAAATTGCATTTTCAACAAGAAGGATCCCATTGTGTTGGGGGTCGATGTAATTGAAGGCATCGCCAAGGTTGGCACACCAATTTGTATTCCTCAAAGAGAGTTTATTGACATTGGTCGCATTGCATCTATTGAAAACAATCACAAACCTGTTGATTTTGCAAAGAAAGGGCAGAAGATTGCCATTAAGATAATTGGGCACTCTCCGGAGGAACAGCAAAAGATGTATGGCAGGCATTTTGATTTGGAGGATGAACTTGTCAGCCATATATCAAGGAAGTCCATTGACCTACTCAAAGCCAATTATCGGGATGATTTATCCATCGAGGAATGGAGACTATACAGAGGAAGCGTGGGAGGGAAGAAGGTTGTTCCTGGAAAAGACACCTGTGCCGAGTTTACGGAAAGGATGATTGTTAAATTCATCAAGGTGAGAAGGTATGCGGCATAA 4053 41.99 MGRKKPTARDDDSAPAAAQGGGKSKKKTFAVDDDEYSIGTELSEEAPVQEEKVVITGKKKGKKGNSKASQVKEEEEDDEDGVSEIVITGKKKGKSKKGGSSSAFAASSFGLLEEEGNDGADDDDDEESVLTAEKDDDEGDDSAIKFSGKKKSSKSSKKSGFSAVSTFSALDDEKDEDVIDDENKVDEEIDDEPVIAFTGKKKSSKGGKKAGNAFTGFSGLNYEDEDRDDDKDEDEDVTTISFSGKKKKSAKASKKSGNSFSATFTGEDNDGDISIPEANKLDNDGVDEDDANVIAFSGKKKSSKKKSSSTFTALSDENALGNEIRDVVVPEILNTASSNFDSDLSKANKTEGVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGPTVSKPADPPLSSQEPKVENPPELVAPPDASVEKEAEEESTESAAARKKKKKKEKEKEKKAAAAAAAAAEGNDEKIEEVKTEIIEPKKGAAKSKVPEKKVPKHVREMQEAMARRKEEEERRKREEEERLRKEEEERRRQEELERQAEEAKRRKKEREKEKLLKKKQEGKLLTGKQKEEQRRLEAMRNQILASAGGLPLSTSDPSAPAKRPKYQTKKTKSAHHQTNGSVQTKVVEHIEDKIQEKDVAETEILESEKIEAVEPMRLEEKSDVVEATEDKEIQEDEDEDEWDAKSWDDAVVDLSLKSSFADEELESEPENGIKKDRKNGATTSRDADDKQKASIPDIENKKVDVNKGKRKDDAVKKKASIPDAAPKQQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIVALNKVDRLYGWKTIRNAPILKTMKQQSKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGIPDMLLLLVQWAQKTMTKKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAIAGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDKTGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGIMTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVIEGIAKVGTPICIPQREFIDIGRIASIENNHKPVDFAKKGQKIAIKIIGHSPEEQQKMYGRHFDLEDELVSHISRKSIDLLKANYRDDLSIEEWRLYRGSVGGKKVVPGKDTCAEFTERMIVKFIKVRRYAA 1350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15682698 15702298 + Lag0038336.1 Lac2g1698 598962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1698 1350 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 765 981 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Lac2g1698 1350 Coils Coil 422 458 - -
Lac2g1698 1350 Gene3D Translation factors 1190 1317 - -
Lac2g1698 1350 CDD IF2_aeIF5B_IV 1196 1291 - -
Lac2g1698 1350 FunFam Eukaryotic translation initiation factor 5B 759 987 - -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 416 435 - -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 1 325 - -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 115 137 - -
Lac2g1698 1350 NCBIfam small GTP-binding protein domain 770 895 IPR005225 GO:0005525(InterPro)
Lac2g1698 1350 MobiDBLite consensus disorder prediction 337 352 - -
Lac2g1698 1350 SUPERFAMILY Translation proteins 1192 1314 IPR009000 -
Lac2g1698 1350 Coils Coil 486 553 - -
Lac2g1698 1350 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 425 1144 IPR015760 GO:0003743(PANTHER)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006413(PANTHER)
Lac2g1698 1350 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1090 1187 IPR036925 -
Lac2g1698 1350 CDD aeIF5B_II 989 1099 - -
Lac2g1698 1350 Gene3D - 1146 1189 IPR036925 -
Lac2g1698 1350 PRINTS GTP-binding elongation factor signature 769 782 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Lac2g1698 1350 PRINTS GTP-binding elongation factor signature 833 843 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Lac2g1698 1350 PRINTS GTP-binding elongation factor signature 885 894 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Lac2g1698 1350 PRINTS GTP-binding elongation factor signature 849 860 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Lac2g1698 1350 FunFam eukaryotic translation initiation factor 5B 988 1107 - -
Lac2g1698 1350 Gene3D - 759 987 IPR027417 -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 173 189 - -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 457 570 - -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 337 617 - -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 273 287 - -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 366 381 - -
Lac2g1698 1350 Coils Coil 1170 1190 - -
Lac2g1698 1350 Gene3D Translation factors 988 1106 - -
Lac2g1698 1350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 763 1056 IPR027417 -
Lac2g1698 1350 CDD IF2_eIF5B 768 978 - -
Lac2g1698 1350 Gene3D - 1113 1145 IPR036925 -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 254 268 - -
Lac2g1698 1350 FunFam Eukaryotic translation initiation factor 5B 1188 1318 - -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 661 678 - -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 691 756 - -
Lac2g1698 1350 MobiDBLite consensus disorder prediction 647 763 - -
Lac2g1698 1350 Pfam Elongation factor Tu domain 4 1195 1268 IPR029459 -
Lac2g1698 1350 Pfam Elongation factor Tu GTP binding domain 768 977 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0990 Lac-Chr2:7838753 Lac2g1698 Lac-Chr2:15682698 1.40E-22 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1698 K03243 - mdm:103425307 1379.77