Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g1698 | ATGGGCCGAAAGAAGCCTACTGCACGGGATGATGACAGCGCCCCTGCGGCAGCTCAGGGTGGTGGGAAGTCGAAGAAAAAGACATTTGCAGTAGACGACGACGAGTACTCCATTGGTACTGAGTTGTCTGAAGAAGCCCCAGTTCAGGAGGAGAAGGTCGTGATAACTGGGAAAAAGAAGGGTAAGAAGGGCAACTCAAAAGCTTCACAAGTTAAAGAGGAGGAGGAGGATGACGAGGATGGTGTTTCAGAAATTGTTATCACCGGGAAGAAGAAGGGTAAGTCGAAGAAGGGTGGAAGTAGCAGTGCTTTTGCTGCTTCTAGTTTTGGTTTGCTTGAGGAGGAAGGAAATGATGGCGCTGATGACGATGATGATGAAGAATCTGTGTTAACTGCAGAAAAAGATGATGATGAAGGGGATGATTCTGCAATCAAGTTTTCAGGTAAGAAGAAGTCGTCAAAGTCTTCCAAGAAGAGTGGTTTTTCTGCAGTGTCAACATTCAGTGCCCTTGATGACGAGAAAGATGAAGATGTAATTGATGATGAAAACAAAGTTGATGAGGAGATTGATGATGAGCCTGTTATTGCATTTACTGGTAAGAAGAAGTCATCAAAAGGTGGCAAGAAGGCTGGGAATGCATTTACAGGTTTTAGTGGTCTTAATTATGAGGATGAGGACAGAGATGATGACAAGGATGAGGATGAAGATGTTACAACAATTAGCTTCTCTGGTAAGAAAAAGAAGTCAGCTAAGGCTTCAAAGAAAAGTGGCAATTCGTTTAGTGCAACATTCACCGGTGAGGATAATGATGGTGATATTTCTATTCCAGAGGCAAACAAATTAGACAATGATGGTGTTGATGAAGACGATGCCAATGTTATTGCATTTTCTGGCAAGAAAAAGTCCTCTAAGAAGAAAAGCAGCAGTACTTTTACTGCATTAAGTGATGAAAATGCACTGGGCAATGAAATTAGAGATGTAGTCGTACCTGAAATACTTAACACAGCAAGTAGCAATTTTGATTCTGATTTATCTAAAGCTAACAAGACGGAGGGGGTGGCAGAAACTTCAAAAAATAAAAAGAAAAAGAAGAAGAGTGGAAGGACCGCTCAAGAAGAAGATGATTTGGATAAGATTCTTGCTGAGCTAGGAGAGGGGCCTACTGTATCAAAACCAGCAGACCCTCCTCTTTCTTCACAAGAGCCCAAAGTTGAAAATCCACCTGAGCTTGTAGCTCCTCCTGATGCATCGGTTGAAAAGGAAGCTGAAGAAGAGAGCACAGAATCAGCTGCAGCAAGGAAGAAAAAAAAGAAGAAGGAGAAGGAAAAGGAAAAAAAGGCTGCAGCTGCAGCAGCTGCTGCTGCTGAAGGGAATGATGAGAAAATTGAGGAGGTAAAGACCGAAATTATAGAACCCAAAAAAGGTGCTGCAAAGAGTAAAGTGCCTGAGAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCAATGGCTAGGAGAAAAGAAGAAGAAGAAAGAAGGAAAAGAGAAGAAGAAGAGAGATTAAGAAAGGAAGAAGAAGAGAGGCGTAGGCAAGAAGAACTTGAAAGGCAAGCTGAGGAGGCTAAGCGTAGGAAAAAGGAAAGAGAAAAAGAGAAGCTCCTAAAGAAGAAACAGGAAGGCAAGCTGTTAACGGGAAAACAAAAGGAAGAACAACGAAGGTTGGAGGCAATGAGGAACCAGATATTAGCAAGTGCGGGGGGTTTACCTCTGTCTACATCTGACCCTAGTGCACCAGCCAAACGACCTAAATACCAGACTAAGAAGACAAAATCAGCACATCACCAAACAAATGGTAGTGTGCAAACTAAGGTAGTGGAACATATAGAAGATAAAATACAAGAAAAAGATGTGGCAGAGACTGAAATATTGGAGTCTGAGAAGATTGAAGCTGTTGAGCCGATGCGCTTGGAGGAAAAATCAGATGTTGTTGAAGCTACTGAAGATAAAGAAATTCAAGAAGACGAGGATGAGGACGAATGGGATGCAAAGAGTTGGGATGATGCTGTTGTTGATCTTTCCTTAAAAAGTTCCTTTGCTGATGAGGAGCTTGAATCCGAACCAGAGAATGGCATTAAAAAAGATAGAAAGAATGGTGCAACGACTTCACGTGATGCAGATGACAAGCAAAAAGCTTCAATTCCAGATATTGAAAACAAGAAGGTCGATGTCAACAAGGGCAAAAGAAAAGATGATGCTGTTAAGAAAAAAGCTTCAATTCCAGATGCTGCTCCTAAACAACAGGAAGAAAATCTCCGCTCACCCATCTGTTGTATTATGGGCCATGTTGATACTGGTAAAACCAAGCTACTGGACTGTATTCGTGGTACAAATGTTCAAGAGGGAGAGGCAGGAGGAATTACTCAGCAGATTGGGGCAACATATTTTCCTGCCGAGAACATTCGTGAAAGAACTAGAGAATTGAAAGCTGATGCAAAGCTGAAGGTTCCTGGTCTACTTGTTATTGATACCCCTGGGCACGAATCGTTTACAAACTTACGTTCTCGTGGTTCTGGTTTATGTGATCTTGCAATTTTGGTTGTTGACATCATGCACGGCTTAGAGCCACAAACAATAGAATCTCTTAATCTCTTGAGGATGAGAAACACAGAATTTATTGTTGCTCTGAATAAGGTTGACAGACTTTATGGGTGGAAAACAATCCGTAATGCACCAATACTTAAGACAATGAAGCAGCAATCCAAGGATGTGCAGAATGAGTTCAATATGAGGCTTATTCAGATTATCACTCAATTTAAAGAGCAGGGATTGAATACCGAGCTGTATTATAAAAATAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTTACTGGTGAAGGTATTCCAGACATGTTATTATTATTGGTGCAATGGGCCCAGAAAACCATGACGAAGAAACTTACATATAGTGATGAAGTGCAGTGTACGGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGGACAACTATTGATGTCATATTGGTTAATGGTGTGCTGCACGAAGGAGATCAAATAGTTGTTTGTGGCATGCAGGGCCCAATTGTTACCACTATTCGAGCCCTATTGACGCCCCATCCAATGAAGGAACTCCGAGTGAAGGGAACATATCTGCATCATAAGGAAATCAAGGCTGCTCAGGGAATAAAAATAACTGGACAGGGTCTTGAGCATGCCATTGCTGGAACCAGTCTTCATGTGGTAGGTCCTGAGGATGACTTGGAAGACATTAAGGATTCAGCTATGGAAGATATGAAGTCAGTCTTGAGCAGGATAGACAAGACTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGTCCCCAGCAGTGAGCATTCCTGTTAGTGGAATAATGACTCCAGAAGCTCGAGAACTTGCCGATGAGCTTGGTGTGAAGATTTTTATTGCAGATATCATTTATCACTTGTTTGACCAATTCAAGGCCTATATCGATAATCTTAAAGAGGAAAAGAAGAAAGAAGCCGCTGAAGAAGCAGTCTTTCCTTGTGTTCTCAAGATTTTACCAAATTGCATTTTCAACAAGAAGGATCCCATTGTGTTGGGGGTCGATGTAATTGAAGGCATCGCCAAGGTTGGCACACCAATTTGTATTCCTCAAAGAGAGTTTATTGACATTGGTCGCATTGCATCTATTGAAAACAATCACAAACCTGTTGATTTTGCAAAGAAAGGGCAGAAGATTGCCATTAAGATAATTGGGCACTCTCCGGAGGAACAGCAAAAGATGTATGGCAGGCATTTTGATTTGGAGGATGAACTTGTCAGCCATATATCAAGGAAGTCCATTGACCTACTCAAAGCCAATTATCGGGATGATTTATCCATCGAGGAATGGAGACTATACAGAGGAAGCGTGGGAGGGAAGAAGGTTGTTCCTGGAAAAGACACCTGTGCCGAGTTTACGGAAAGGATGATTGTTAAATTCATCAAGGTGAGAAGGTATGCGGCATAA | 4053 | 41.99 | MGRKKPTARDDDSAPAAAQGGGKSKKKTFAVDDDEYSIGTELSEEAPVQEEKVVITGKKKGKKGNSKASQVKEEEEDDEDGVSEIVITGKKKGKSKKGGSSSAFAASSFGLLEEEGNDGADDDDDEESVLTAEKDDDEGDDSAIKFSGKKKSSKSSKKSGFSAVSTFSALDDEKDEDVIDDENKVDEEIDDEPVIAFTGKKKSSKGGKKAGNAFTGFSGLNYEDEDRDDDKDEDEDVTTISFSGKKKKSAKASKKSGNSFSATFTGEDNDGDISIPEANKLDNDGVDEDDANVIAFSGKKKSSKKKSSSTFTALSDENALGNEIRDVVVPEILNTASSNFDSDLSKANKTEGVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGPTVSKPADPPLSSQEPKVENPPELVAPPDASVEKEAEEESTESAAARKKKKKKEKEKEKKAAAAAAAAAEGNDEKIEEVKTEIIEPKKGAAKSKVPEKKVPKHVREMQEAMARRKEEEERRKREEEERLRKEEEERRRQEELERQAEEAKRRKKEREKEKLLKKKQEGKLLTGKQKEEQRRLEAMRNQILASAGGLPLSTSDPSAPAKRPKYQTKKTKSAHHQTNGSVQTKVVEHIEDKIQEKDVAETEILESEKIEAVEPMRLEEKSDVVEATEDKEIQEDEDEDEWDAKSWDDAVVDLSLKSSFADEELESEPENGIKKDRKNGATTSRDADDKQKASIPDIENKKVDVNKGKRKDDAVKKKASIPDAAPKQQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIVALNKVDRLYGWKTIRNAPILKTMKQQSKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGIPDMLLLLVQWAQKTMTKKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAIAGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDKTGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGIMTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVIEGIAKVGTPICIPQREFIDIGRIASIENNHKPVDFAKKGQKIAIKIIGHSPEEQQKMYGRHFDLEDELVSHISRKSIDLLKANYRDDLSIEEWRLYRGSVGGKKVVPGKDTCAEFTERMIVKFIKVRRYAA | 1350 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 15682698 | 15702298 | + | Lag0038336.1 | Lac2g1698 | 598962 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g1698 | 1350 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 765 | 981 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Lac2g1698 | 1350 | Coils | Coil | 422 | 458 | - | - | |
Lac2g1698 | 1350 | Gene3D | Translation factors | 1190 | 1317 | - | - | |
Lac2g1698 | 1350 | CDD | IF2_aeIF5B_IV | 1196 | 1291 | - | - | |
Lac2g1698 | 1350 | FunFam | Eukaryotic translation initiation factor 5B | 759 | 987 | - | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 416 | 435 | - | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 1 | 325 | - | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 115 | 137 | - | - | |
Lac2g1698 | 1350 | NCBIfam | small GTP-binding protein domain | 770 | 895 | IPR005225 | GO:0005525(InterPro) | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 337 | 352 | - | - | |
Lac2g1698 | 1350 | SUPERFAMILY | Translation proteins | 1192 | 1314 | IPR009000 | - | |
Lac2g1698 | 1350 | Coils | Coil | 486 | 553 | - | - | |
Lac2g1698 | 1350 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 425 | 1144 | IPR015760 | GO:0003743(PANTHER)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006413(PANTHER) | |
Lac2g1698 | 1350 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 1090 | 1187 | IPR036925 | - | |
Lac2g1698 | 1350 | CDD | aeIF5B_II | 989 | 1099 | - | - | |
Lac2g1698 | 1350 | Gene3D | - | 1146 | 1189 | IPR036925 | - | |
Lac2g1698 | 1350 | PRINTS | GTP-binding elongation factor signature | 769 | 782 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Lac2g1698 | 1350 | PRINTS | GTP-binding elongation factor signature | 833 | 843 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Lac2g1698 | 1350 | PRINTS | GTP-binding elongation factor signature | 885 | 894 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Lac2g1698 | 1350 | PRINTS | GTP-binding elongation factor signature | 849 | 860 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Lac2g1698 | 1350 | FunFam | eukaryotic translation initiation factor 5B | 988 | 1107 | - | - | |
Lac2g1698 | 1350 | Gene3D | - | 759 | 987 | IPR027417 | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 173 | 189 | - | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 457 | 570 | - | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 337 | 617 | - | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 273 | 287 | - | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 366 | 381 | - | - | |
Lac2g1698 | 1350 | Coils | Coil | 1170 | 1190 | - | - | |
Lac2g1698 | 1350 | Gene3D | Translation factors | 988 | 1106 | - | - | |
Lac2g1698 | 1350 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 763 | 1056 | IPR027417 | - | |
Lac2g1698 | 1350 | CDD | IF2_eIF5B | 768 | 978 | - | - | |
Lac2g1698 | 1350 | Gene3D | - | 1113 | 1145 | IPR036925 | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 254 | 268 | - | - | |
Lac2g1698 | 1350 | FunFam | Eukaryotic translation initiation factor 5B | 1188 | 1318 | - | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 661 | 678 | - | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 691 | 756 | - | - | |
Lac2g1698 | 1350 | MobiDBLite | consensus disorder prediction | 647 | 763 | - | - | |
Lac2g1698 | 1350 | Pfam | Elongation factor Tu domain 4 | 1195 | 1268 | IPR029459 | - | |
Lac2g1698 | 1350 | Pfam | Elongation factor Tu GTP binding domain | 768 | 977 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g0990 | Lac-Chr2:7838753 | Lac2g1698 | Lac-Chr2:15682698 | 1.40E-22 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac2g1698 | K03243 | - | mdm:103425307 | 1379.77 |