Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1700 ATGTCGACACTAAACCATAGCAGCTCCCACAACCACAACCACGTAGTAGACGAAATCCAATCCCAACCCTTCGACTACTCCAAACGCGCCCAATGGCTACGCGCCGCCGTGCTCGGTGCCAACGACGGCCTCGTCTCCACTGCCTCTCTCATGATGGGCGTCGGCGCTGTCAAGCACGACGTCAAGGCCATGATCCTCACTGGCTTCGCCGGCCTCGTCGCCGGTGCCTGTAGCATGGCCATCGGTGAGTTTGTCTCCGTTTACTCTCAGTTGGATATAGAAATGGCCCAAATGAGAAGAAACAAGGACCATATCAAGGACTTGGAGGAGGAGAGAGAGAATCTCCCCAACCCTCTTCAGGCCGCCGCGGCTTCCGCGTTGGCCTTTTCCATGGGGGCAATGGTGCCCTTGCTGGCTGCGGCCTTCATAAAGGAGTATAGGGTTCGGCTCGGGGTGGTGGTGGCGGCGGTGACGATGGCTCTGGTGGGGTTTGGGTGGCTCGGGGCGGCGCTGGGGAAGGCACCAACGGTGAGGTCCGCTGTGAGGGTTTTGATCGGAGGGTGGGTGGCCATGGCTGTGACTTTTGGATTGACTAAGTTGATTGGTTCGAGTGGACTGTGA 621 58.62 MSTLNHSSSHNHNHVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQMRRNKDHIKDLEEERENLPNPLQAAAASALAFSMGAMVPLLAAAFIKEYRVRLGVVVAAVTMALVGFGWLGAALGKAPTVRSAVRVLIGGWVAMAVTFGLTKLIGSSGL 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15744888 15745508 - Lag0038338.1 Lac2g1700 598964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1700 206 Coils Coil 91 111 - -
Lac2g1700 206 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 7 203 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
Lac2g1700 206 Pfam VIT family 33 113 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Lac2g1700 206 Pfam VIT family 109 198 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1700 Lac-Chr2:15744888 Lac8g1684 Lac-Chr8:34956301 8.40E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1700 K22736 - csv:101210510 316.62